RNA–Protein interactions for RNA: ENST00000509967.6

TRIO-214, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2 BASIC

Gene TRIO, Length 4,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-214ENST00000509967 PTPRGP23470 1445 aa11.64□□□□□ -0.55
TRIO-214ENST00000509967 IFT140Q96RY7 1462 aa11.64□□□□□ -0.55
TRIO-214ENST00000509967 E9PSI1 815 aa11.64□□□□□ -0.55
TRIO-214ENST00000509967 ARXQ96QS3 562 aa11.64□□□□□ -0.55
TRIO-214ENST00000509967 AQRO60306 1485 aaKnown RBP eCLIP11.64□□□□□ -0.55
TRIO-214ENST00000509967 WASHC2AQ641Q2 1341 aa11.63□□□□□ -0.55
TRIO-214ENST00000509967 WASHC2CQ9Y4E1 1318 aa11.63□□□□□ -0.55
TRIO-214ENST00000509967 U2AF1L5P0DN76 240 aaPredicted RBP11.63□□□□□ -0.55
TRIO-214ENST00000509967 U2AF1Q01081 240 aaKnown RBP eCLIP11.63□□□□□ -0.55
TRIO-214ENST00000509967 KIAA1211Q6ZU35 1233 aa11.63□□□□□ -0.55
TRIO-214ENST00000509967 PLEKHH2Q8IVE3 1493 aa11.63□□□□□ -0.55
TRIO-214ENST00000509967 FGD1P98174 961 aa11.62□□□□□ -0.55
TRIO-214ENST00000509967 GPATCH3Q96I76 525 aa11.62□□□□□ -0.55
TRIO-214ENST00000509967 PRXQ9BXM0 1461 aa11.62□□□□□ -0.55
TRIO-214ENST00000509967 NAP1L5Q96NT1 182 aaPredicted RBP11.61□□□□□ -0.55
TRIO-214ENST00000509967 MAP3K1Q13233 1512 aa11.61□□□□□ -0.55
TRIO-214ENST00000509967 STK31Q9BXU1 1019 aa11.61□□□□□ -0.55
TRIO-214ENST00000509967 GRIN2BQ13224 1484 aa11.61□□□□□ -0.55
TRIO-214ENST00000509967 ZBTB7CA1YPR0 619 aa11.6□□□□□ -0.55
TRIO-214ENST00000509967 VGFO15240 615 aaPredicted RBP11.6□□□□□ -0.55
TRIO-214ENST00000509967 NCOA2Q15596 1464 aa11.6□□□□□ -0.55
TRIO-214ENST00000509967 HFM1A2PYH4 1435 aa11.6□□□□□ -0.55
TRIO-214ENST00000509967 DDX11L8A8MPP1 907 aa11.6□□□□□ -0.55
TRIO-214ENST00000509967 KIF3BO15066 747 aa11.59□□□□□ -0.55
TRIO-214ENST00000509967 BRD4O60885 1362 aaPredicted RBP11.59□□□□□ -0.55
TRIO-214ENST00000509967 EVC2Q86UK5 1308 aa11.59□□□□□ -0.55
TRIO-214ENST00000509967 PHF14O94880 888 aa11.59□□□□□ -0.55
TRIO-214ENST00000509967 CCDC34Q96HJ3 373 aa11.59□□□□□ -0.55
TRIO-214ENST00000509967 ROCK1Q13464 1354 aa11.59□□□□□ -0.55
TRIO-214ENST00000509967 CCDC7Q96M83 1385 aa11.59□□□□□ -0.55
TRIO-214ENST00000509967 HECW1Q76N89 1606 aa11.58□□□□□ -0.56
TRIO-214ENST00000509967 SKOR2Q2VWA4 1001 aaPredicted RBP11.58□□□□□ -0.56
TRIO-214ENST00000509967 ITPRIPQ8IWB1 547 aa11.58□□□□□ -0.56
TRIO-214ENST00000509967 GGT6Q6P531 493 aa11.58□□□□□ -0.56
TRIO-214ENST00000509967 FAM161AQ3B820 660 aa11.57□□□□□ -0.56
TRIO-214ENST00000509967 SMC4Q9NTJ3 1288 aa11.57□□□□□ -0.56
TRIO-214ENST00000509967 TOPBP1Q92547 1522 aa11.57□□□□□ -0.56
TRIO-214ENST00000509967 HNRNPMP52272 730 aaKnown RBP eCLIP11.57□□□□□ -0.567e-7■■■■□ 19.6
TRIO-214ENST00000509967 RRP1P56182 461 aaKnown RBP11.57□□□□□ -0.56
TRIO-214ENST00000509967 KIF3AQ9Y496 699 aa11.57□□□□□ -0.56
TRIO-214ENST00000509967 KIAA2012Q0VF49 1180 aa11.57□□□□□ -0.56
TRIO-214ENST00000509967 FOXD1Q16676 465 aa11.57□□□□□ -0.56
TRIO-214ENST00000509967 SYNJ1O43426 1573 aa11.56□□□□□ -0.56
TRIO-214ENST00000509967 EID1Q9Y6B2 187 aa11.55□□□□□ -0.56
TRIO-214ENST00000509967 TIAM1Q13009 1591 aa11.55□□□□□ -0.56
TRIO-214ENST00000509967 RTN4Q9NQC3 1192 aaKnown RBP11.55□□□□□ -0.56
TRIO-214ENST00000509967 GOLGA6L3A6NEY3 463 aa11.55□□□□□ -0.56
TRIO-214ENST00000509967 ST18O60284 1047 aa11.55□□□□□ -0.56
TRIO-214ENST00000509967 PRKCSHP14314 528 aaPredicted RBP11.55□□□□□ -0.56
TRIO-214ENST00000509967 TPM4P67936 248 aa11.55□□□□□ -0.56
TRIO-214ENST00000509967 ANKRD50Q9ULJ7 1429 aa11.54□□□□□ -0.56
TRIO-214ENST00000509967 NINLQ9Y2I6 1382 aa11.54□□□□□ -0.56
TRIO-214ENST00000509967 ST20-MTHFSA0A0A6YYL1 179 aa11.54□□□□□ -0.56
TRIO-214ENST00000509967 PEG3Q9GZU2 1588 aa11.53□□□□□ -0.56
TRIO-214ENST00000509967 ARAP1Q96P48 1450 aa11.53□□□□□ -0.56
TRIO-214ENST00000509967 ZKSCAN2Q63HK3 967 aa11.53□□□□□ -0.56
TRIO-214ENST00000509967 SYNJ2O15056 1496 aa11.53□□□□□ -0.56
TRIO-214ENST00000509967 DNMBPQ6XZF7 1577 aa11.52□□□□□ -0.57
TRIO-214ENST00000509967 PANK3Q9H999 370 aa11.52□□□□□ -0.57
TRIO-214ENST00000509967 ATP6V1DQ9Y5K8 247 aa11.52□□□□□ -0.57
TRIO-214ENST00000509967 SUPT6HQ7KZ85 1726 aaKnown RBP11.52□□□□□ -0.57
TRIO-214ENST00000509967 DDX19BQ9UMR2 479 aa11.51□□□□□ -0.57
TRIO-214ENST00000509967 CUL7Q14999 1698 aa11.51□□□□□ -0.57
TRIO-214ENST00000509967 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.51□□□□□ -0.57
TRIO-214ENST00000509967 POLA1P09884 1462 aaPredicted RBP11.5□□□□□ -0.57
TRIO-214ENST00000509967 API5Q9BZZ5 524 aaKnown RBP11.49□□□□□ -0.57
TRIO-214ENST00000509967 KIF16BQ96L93 1317 aa11.49□□□□□ -0.57
TRIO-214ENST00000509967 MLECQ14165 292 aa11.49□□□□□ -0.57
TRIO-214ENST00000509967 PDE4AP27815 886 aa11.48□□□□□ -0.57
TRIO-214ENST00000509967 STK26Q9P289 416 aa11.48□□□□□ -0.57
TRIO-214ENST00000509967 KIAA1107Q9UPP5 1409 aa11.48□□□□□ -0.57
TRIO-214ENST00000509967 MSH5O43196 834 aa11.48□□□□□ -0.57
TRIO-214ENST00000509967 LRRFIP1Q32MZ4 808 aaKnown RBP11.48□□□□□ -0.57
TRIO-214ENST00000509967 KIF7Q2M1P5 1343 aa11.47□□□□□ -0.57
TRIO-214ENST00000509967 PLCB2Q00722 1185 aa11.47□□□□□ -0.57
TRIO-214ENST00000509967 RUNDC1Q96C34 613 aa11.47□□□□□ -0.57
TRIO-214ENST00000509967 TROQ12816 1431 aaPredicted RBP11.47□□□□□ -0.57
TRIO-214ENST00000509967 LMOD2Q6P5Q4 547 aa11.46□□□□□ -0.57
TRIO-214ENST00000509967 REC8O95072 547 aa11.46□□□□□ -0.58
TRIO-214ENST00000509967 DRC7Q8IY82 874 aa11.46□□□□□ -0.58
TRIO-214ENST00000509967 CT47B1P0C2W7 299 aaPredicted RBP11.46□□□□□ -0.58
TRIO-214ENST00000509967 FAM69CQ0P6D2 419 aa11.46□□□□□ -0.58
TRIO-214ENST00000509967 GNL2Q13823 731 aaKnown RBP11.46□□□□□ -0.58
TRIO-214ENST00000509967 COG3Q96JB2 828 aa11.46□□□□□ -0.58
TRIO-214ENST00000509967 PRDM2Q13029 1718 aa11.45□□□□□ -0.58
TRIO-214ENST00000509967 SNAPC4Q5SXM2 1469 aa11.45□□□□□ -0.58
TRIO-214ENST00000509967 MFAP1P55081 439 aaKnown RBP11.45□□□□□ -0.58
TRIO-214ENST00000509967 A0A0G2JS52 829 aa11.45□□□□□ -0.58
TRIO-214ENST00000509967 WWC1Q8IX03 1113 aa11.44□□□□□ -0.58
TRIO-214ENST00000509967 ABCA10Q8WWZ4 1543 aa11.44□□□□□ -0.58
TRIO-214ENST00000509967 RUFY2Q8WXA3 655 aa11.44□□□□□ -0.58
TRIO-214ENST00000509967 RSPH6AQ9H0K4 717 aa11.44□□□□□ -0.58
TRIO-214ENST00000509967 SAFB2Q14151 953 aaKnown RBP eCLIP11.43□□□□□ -0.58
TRIO-214ENST00000509967 NAP1L2Q9ULW6 460 aaPredicted RBP11.42□□□□□ -0.58
TRIO-214ENST00000509967 GNAI1P63096 354 aa11.42□□□□□ -0.58
TRIO-214ENST00000509967 HSP90AB4PQ58FF6 505 aa11.42□□□□□ -0.58
TRIO-214ENST00000509967 ARHGAP5Q13017 1502 aa11.42□□□□□ -0.58
TRIO-214ENST00000509967 PRG4Q92954 1404 aaPredicted RBP11.42□□□□□ -0.58
TRIO-214ENST00000509967 DIAPH1O60610 1272 aaKnown RBP11.42□□□□□ -0.58
TRIO-214ENST00000509967 AMPHP49418 695 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms