RNA–Protein interactions for RNA: ENST00000506962.3

CCDC110-205, Transcript of coiled-coil domain containing 110, humanhuman

APPRIS ALT2 TSL 2

Gene CCDC110, Length 544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC110-205ENST00000506962 TMC2Q8TDI7 906 aa10.39□□□□□ -0.75
CCDC110-205ENST00000506962 ABCA5Q8WWZ7 1642 aa10.39□□□□□ -0.75
CCDC110-205ENST00000506962 KIF3CO14782 793 aa10.38□□□□□ -0.75
CCDC110-205ENST00000506962 VARS2Q5ST30 1063 aaKnown RBP10.38□□□□□ -0.75
CCDC110-205ENST00000506962 CHMP7Q8WUX9 453 aaPredicted RBP10.38□□□□□ -0.75
CCDC110-205ENST00000506962 FHAD1B1AJZ9 1412 aa10.37□□□□□ -0.75
CCDC110-205ENST00000506962 CHD1O14646 1710 aa10.37□□□□□ -0.75
CCDC110-205ENST00000506962 KRTAP3-3Q9BYR6 98 aa10.37□□□□□ -0.75
CCDC110-205ENST00000506962 KRTAP3-2Q9BYR7 98 aa10.37□□□□□ -0.75
CCDC110-205ENST00000506962 ERCC6L2Q5T890 1561 aa10.36□□□□□ -0.75
CCDC110-205ENST00000506962 SPNS2Q8IVW8 549 aa10.36□□□□□ -0.75
CCDC110-205ENST00000506962 IGF1RP08069 1367 aa10.36□□□□□ -0.75
CCDC110-205ENST00000506962 ZSWIM6Q9HCJ5 1215 aa10.35□□□□□ -0.75
CCDC110-205ENST00000506962 SYNJ2O15056 1496 aa10.35□□□□□ -0.75
CCDC110-205ENST00000506962 SNAPC4Q5SXM2 1469 aa10.34□□□□□ -0.75
CCDC110-205ENST00000506962 CARMIL1Q5VZK9 1371 aa10.33□□□□□ -0.76
CCDC110-205ENST00000506962 CUL7Q14999 1698 aa10.32□□□□□ -0.76
CCDC110-205ENST00000506962 MMRN1Q13201 1228 aa10.31□□□□□ -0.76
CCDC110-205ENST00000506962 PBRM1Q86U86 1689 aa10.31□□□□□ -0.76
CCDC110-205ENST00000506962 HECW2Q9P2P5 1572 aa10.31□□□□□ -0.76
CCDC110-205ENST00000506962 NUDT7P0C024 238 aa10.3□□□□□ -0.76
CCDC110-205ENST00000506962 CLASP1Q7Z460 1538 aa10.29□□□□□ -0.76
CCDC110-205ENST00000506962 RAPGEF2Q9Y4G8 1499 aa10.29□□□□□ -0.76
CCDC110-205ENST00000506962 ADAMTS12P58397 1594 aa10.28□□□□□ -0.76
CCDC110-205ENST00000506962 PCDHGA4Q9Y5G9 962 aa10.28□□□□□ -0.76
CCDC110-205ENST00000506962 GRIN2AQ12879 1464 aa10.28□□□□□ -0.76
CCDC110-205ENST00000506962 ZNF316A6NFI3 1004 aaPredicted RBP10.27□□□□□ -0.77
CCDC110-205ENST00000506962 PLPP6Q8IY26 295 aa10.26□□□□□ -0.77
CCDC110-205ENST00000506962 PRXQ9BXM0 1461 aa10.25□□□□□ -0.77
CCDC110-205ENST00000506962 DSG2Q14126 1118 aa10.25□□□□□ -0.77
CCDC110-205ENST00000506962 ZNF687Q8N1G0 1237 aa10.25□□□□□ -0.77
CCDC110-205ENST00000506962 KIF13AQ9H1H9 1805 aa10.24□□□□□ -0.77
CCDC110-205ENST00000506962 RUSC2Q8N2Y8 1516 aa10.24□□□□□ -0.77
CCDC110-205ENST00000506962 FAM9AQ8IZU1 332 aaPredicted RBP10.24□□□□□ -0.77
CCDC110-205ENST00000506962 GPHNQ9NQX3 736 aaPredicted RBP10.24□□□□□ -0.77
CCDC110-205ENST00000506962 NUP160Q12769 1436 aa10.24□□□□□ -0.77
CCDC110-205ENST00000506962 GTPBP6O43824 516 aaPredicted RBP10.23□□□□□ -0.77
CCDC110-205ENST00000506962 LHX6Q9UPM6 363 aa10.23□□□□□ -0.77
CCDC110-205ENST00000506962 FOXK1P85037 733 aa10.22□□□□□ -0.77
CCDC110-205ENST00000506962 RYDENQ9NUL5 291 aaKnown RBP10.22□□□□□ -0.77
CCDC110-205ENST00000506962 KIAA0586Q9BVV6 1533 aa10.22□□□□□ -0.77
CCDC110-205ENST00000506962 SLC34A2O95436 690 aa10.21□□□□□ -0.77
CCDC110-205ENST00000506962 KIF21BO75037 1637 aa10.2□□□□□ -0.78
CCDC110-205ENST00000506962 BCANQ96GW7 911 aa10.2□□□□□ -0.78
CCDC110-205ENST00000506962 GOLGA3Q08378 1498 aa10.19□□□□□ -0.78
CCDC110-205ENST00000506962 ANKRD13DQ6ZTN6 518 aa10.19□□□□□ -0.78
CCDC110-205ENST00000506962 HAP1P54257 671 aaPredicted RBP10.18□□□□□ -0.78
CCDC110-205ENST00000506962 DISP3Q9P2K9 1392 aa10.17□□□□□ -0.78
CCDC110-205ENST00000506962 UBTFP17480 764 aaKnown RBP10.17□□□□□ -0.78
CCDC110-205ENST00000506962 UPF1Q92900 1129 aaKnown RBP eCLIP10.17□□□□□ -0.78
CCDC110-205ENST00000506962 JPH4Q96JJ6 628 aa10.17□□□□□ -0.78
CCDC110-205ENST00000506962 AXIN2Q9Y2T1 843 aa10.17□□□□□ -0.78
CCDC110-205ENST00000506962 CARMIL2Q6F5E8 1435 aa10.16□□□□□ -0.78
CCDC110-205ENST00000506962 VSIG10Q8N0Z9 540 aa10.16□□□□□ -0.78
CCDC110-205ENST00000506962 ADGRL1O94910 1474 aa10.16□□□□□ -0.78
CCDC110-205ENST00000506962 NCKAP5LQ9HCH0 1330 aa10.14□□□□□ -0.79
CCDC110-205ENST00000506962 PTCD2Q8WV60 388 aaKnown RBP10.14□□□□□ -0.79
CCDC110-205ENST00000506962 CRISPLD2Q9H0B8 497 aa10.14□□□□□ -0.79
CCDC110-205ENST00000506962 CEP170Q5SW79 1584 aa10.14□□□□□ -0.79
CCDC110-205ENST00000506962 PDE4AP27815 886 aa10.13□□□□□ -0.79
CCDC110-205ENST00000506962 LARP6Q9BRS8 491 aaKnown RBP10.13□□□□□ -0.79
CCDC110-205ENST00000506962 IQGAP2Q13576 1575 aa10.13□□□□□ -0.79
CCDC110-205ENST00000506962 TBC1D12O60347 775 aa10.12□□□□□ -0.79
CCDC110-205ENST00000506962 PPP1R15BQ5SWA1 713 aa10.12□□□□□ -0.79
CCDC110-205ENST00000506962 POTEEQ6S8J3 1075 aa10.12□□□□□ -0.79
CCDC110-205ENST00000506962 KDM6BO15054 1643 aa10.11□□□□□ -0.79
CCDC110-205ENST00000506962 FAM69CQ0P6D2 419 aa10.11□□□□□ -0.79
CCDC110-205ENST00000506962 TNIKQ9UKE5 1360 aa10.11□□□□□ -0.79
CCDC110-205ENST00000506962 PRG4Q92954 1404 aaPredicted RBP10.09□□□□□ -0.79
CCDC110-205ENST00000506962 UGGT2Q9NYU1 1516 aa10.09□□□□□ -0.79
CCDC110-205ENST00000506962 SHROOM2Q13796 1616 aa10.09□□□□□ -0.79
CCDC110-205ENST00000506962 LSM11P83369 360 aaKnown RBP eCLIP10.09□□□□□ -0.79
CCDC110-205ENST00000506962 CADPS2Q86UW7 1296 aa10.09□□□□□ -0.79
CCDC110-205ENST00000506962 MYT1LQ9UL68 1186 aa10.08□□□□□ -0.8
CCDC110-205ENST00000506962 ABCC10Q5T3U5 1492 aa10.08□□□□□ -0.8
CCDC110-205ENST00000506962 CTTNBP2Q8WZ74 1663 aa10.07□□□□□ -0.8
CCDC110-205ENST00000506962 OXER1Q8TDS5 423 aa10.07□□□□□ -0.8
CCDC110-205ENST00000506962 RNF166Q96A37 237 aaPredicted RBP10.07□□□□□ -0.8
CCDC110-205ENST00000506962 EFCAB5A4FU69 1503 aa10.07□□□□□ -0.8
CCDC110-205ENST00000506962 PSEN2P49810 448 aa10.05□□□□□ -0.8
CCDC110-205ENST00000506962 DDX27Q96GQ7 796 aaKnown RBP10.05□□□□□ -0.8
CCDC110-205ENST00000506962 PTPRGP23470 1445 aa10.05□□□□□ -0.8
CCDC110-205ENST00000506962 ARHGAP33O14559 1287 aa10.03□□□□□ -0.8
CCDC110-205ENST00000506962 PBX2P40425 430 aa10.03□□□□□ -0.8
CCDC110-205ENST00000506962 BBXQ8WY36 941 aaPredicted RBP10.03□□□□□ -0.8
CCDC110-205ENST00000506962 PSDA5PKW4 1024 aaPredicted RBP10.02□□□□□ -0.81
CCDC110-205ENST00000506962 PPP4R3BQ5MIZ7 849 aa10.02□□□□□ -0.81
CCDC110-205ENST00000506962 DMRTA1Q5VZB9 504 aa10.02□□□□□ -0.81
CCDC110-205ENST00000506962 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.02□□□□□ -0.81
CCDC110-205ENST00000506962 DISP1Q96F81 1524 aa10.02□□□□□ -0.81
CCDC110-205ENST00000506962 FMN1Q68DA7 1419 aa10.01□□□□□ -0.81
CCDC110-205ENST00000506962 ZNF454Q8N9F8 522 aa10□□□□□ -0.81
CCDC110-205ENST00000506962 DIP2BQ9P265 1576 aa10□□□□□ -0.81
CCDC110-205ENST00000506962 KIAA0556O60303 1618 aa10□□□□□ -0.81
CCDC110-205ENST00000506962 CLIP1P30622 1438 aa9.99□□□□□ -0.81
CCDC110-205ENST00000506962 EVI5O60447 810 aa9.99□□□□□ -0.81
CCDC110-205ENST00000506962 MAP3K9P80192 1104 aa9.99□□□□□ -0.81
CCDC110-205ENST00000506962 SAMD9Q5K651 1589 aa9.98□□□□□ -0.81
CCDC110-205ENST00000506962 MFSD10Q14728 455 aa9.98□□□□□ -0.81
CCDC110-205ENST00000506962 KCNK17Q96T54 332 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms