RNA–Protein interactions for RNA: ENST00000506962.3

CCDC110-205, Transcript of coiled-coil domain containing 110, humanhuman

APPRIS ALT2 TSL 2

Gene CCDC110, Length 544 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC110-205ENST00000506962 AEBP2Q6ZN18 517 aaPredicted RBP23.51■■□□□ 1.35
CCDC110-205ENST00000506962 CHIC1Q5VXU3 224 aa22.43■■□□□ 1.18
CCDC110-205ENST00000506962 SENP3Q9H4L4 574 aaPredicted RBP19.94■□□□□ 0.78
CCDC110-205ENST00000506962 PHF23Q9BUL5 403 aaPredicted RBP19.8■□□□□ 0.76
CCDC110-205ENST00000506962 FOXD1Q16676 465 aa18.65■□□□□ 0.58
CCDC110-205ENST00000506962 PLPPR3Q6T4P5 718 aa17.98■□□□□ 0.47
CCDC110-205ENST00000506962 PPP6R1Q9UPN7 881 aa17.61■□□□□ 0.41
CCDC110-205ENST00000506962 ADRA2BP18089 450 aa17.59■□□□□ 0.41
CCDC110-205ENST00000506962 PIAS4Q8N2W9 510 aaPredicted RBP17.47■□□□□ 0.39
CCDC110-205ENST00000506962 MSH5O43196 834 aa17.3■□□□□ 0.36
CCDC110-205ENST00000506962 POTEDQ86YR6 584 aa16.68■□□□□ 0.26
CCDC110-205ENST00000506962 MAPK8IP2Q13387 824 aaPredicted RBP16.13■□□□□ 0.17
CCDC110-205ENST00000506962 SCAF1Q9H7N4 1312 aaKnown RBP15.96■□□□□ 0.15
CCDC110-205ENST00000506962 PPP4R3CPQ6ZMV5 832 aa15.85■□□□□ 0.13
CCDC110-205ENST00000506962 DMRT2Q9Y5R5 561 aa15.85■□□□□ 0.13
CCDC110-205ENST00000506962 CNKSR2Q8WXI2 1034 aa15.45■□□□□ 0.06
CCDC110-205ENST00000506962 DCAF8L1A6NGE4 600 aa15.36■□□□□ 0.05
CCDC110-205ENST00000506962 HOXD11P31277 338 aaPredicted RBP15.31■□□□□ 0.04
CCDC110-205ENST00000506962 RNF216Q9NWF9 866 aaPredicted RBP15.26■□□□□ 0.03
CCDC110-205ENST00000506962 NCBP3Q53F19 620 aaKnown RBP15.23■□□□□ 0.03
CCDC110-205ENST00000506962 NPM3O75607 178 aaKnown RBP15.06■□□□□ 0
CCDC110-205ENST00000506962 KCNA4P22459 653 aa14.97□□□□□ -0.01
CCDC110-205ENST00000506962 CACNB1Q02641 598 aaPredicted RBP14.85□□□□□ -0.03
CCDC110-205ENST00000506962 RNF39Q9H2S5 420 aa14.79□□□□□ -0.04
CCDC110-205ENST00000506962 NISCHQ9Y2I1 1504 aa14.73□□□□□ -0.05
CCDC110-205ENST00000506962 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.69□□□□□ -0.06
CCDC110-205ENST00000506962 DNAJC5BQ9UF47 199 aa14.62□□□□□ -0.07
CCDC110-205ENST00000506962 C1QBPQ07021 282 aaKnown RBP14.57□□□□□ -0.08
CCDC110-205ENST00000506962 U3KPZ7 1027 aaPredicted RBP14.37□□□□□ -0.11
CCDC110-205ENST00000506962 SLC4A2P04920 1241 aa14.34□□□□□ -0.11
CCDC110-205ENST00000506962 SPINK5Q9NQ38 1064 aaPredicted RBP14.17□□□□□ -0.14
CCDC110-205ENST00000506962 CAPN15O75808 1086 aa14.14□□□□□ -0.15
CCDC110-205ENST00000506962 SLC4A1APQ9BWU0 796 aaKnown RBP14.14□□□□□ -0.15
CCDC110-205ENST00000506962 TRHP20396 242 aaPredicted RBP13.98□□□□□ -0.17
CCDC110-205ENST00000506962 DSG3P32926 999 aa13.95□□□□□ -0.18
CCDC110-205ENST00000506962 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.93□□□□□ -0.18
CCDC110-205ENST00000506962 HNRNPUL2Q1KMD3 747 aaKnown RBP13.93□□□□□ -0.18
CCDC110-205ENST00000506962 APLP2Q06481 763 aa13.89□□□□□ -0.19
CCDC110-205ENST00000506962 MYCNP04198 464 aaPredicted RBP13.88□□□□□ -0.19
CCDC110-205ENST00000506962 SAMD1Q6SPF0 538 aaPredicted RBP13.88□□□□□ -0.19
CCDC110-205ENST00000506962 ABCB7O75027 752 aa13.86□□□□□ -0.19
CCDC110-205ENST00000506962 FOXD4L1Q9NU39 408 aa13.84□□□□□ -0.19
CCDC110-205ENST00000506962 ZNF219Q9P2Y4 722 aaPredicted RBP13.82□□□□□ -0.2
CCDC110-205ENST00000506962 ZBTB22O15209 634 aa13.75□□□□□ -0.21
CCDC110-205ENST00000506962 ATF5Q9Y2D1 282 aaPredicted RBP13.65□□□□□ -0.22
CCDC110-205ENST00000506962 POLA2Q14181 598 aa13.6□□□□□ -0.23
CCDC110-205ENST00000506962 ATXN8OSP0DMR3 200 aa13.31□□□□□ -0.28
CCDC110-205ENST00000506962 CSRNP3Q8WYN3 585 aa13.28□□□□□ -0.28
CCDC110-205ENST00000506962 EHMT2Q96KQ7 1210 aa13.28□□□□□ -0.28
CCDC110-205ENST00000506962 RBM42Q9BTD8 480 aaKnown RBP13.24□□□□□ -0.29
CCDC110-205ENST00000506962 ZBTB12Q9Y330 459 aaPredicted RBP13.2□□□□□ -0.3
CCDC110-205ENST00000506962 ABCC9O60706 1549 aa13.18□□□□□ -0.3
CCDC110-205ENST00000506962 OSCARQ8IYS5 282 aa13.15□□□□□ -0.3
CCDC110-205ENST00000506962 POTEHQ6S545 545 aa13.11□□□□□ -0.31
CCDC110-205ENST00000506962 FBLN2P98095 1184 aa13.04□□□□□ -0.32
CCDC110-205ENST00000506962 CCDC180Q9P1Z9 1646 aa13.03□□□□□ -0.32
CCDC110-205ENST00000506962 MKRN4PQ13434 485 aaPredicted RBP12.99□□□□□ -0.33
CCDC110-205ENST00000506962 AKT1S1Q96B36 256 aa12.99□□□□□ -0.33
CCDC110-205ENST00000506962 CHRDL2Q6WN34 429 aa12.95□□□□□ -0.34
CCDC110-205ENST00000506962 REM2Q8IYK8 340 aaPredicted RBP12.93□□□□□ -0.34
CCDC110-205ENST00000506962 SPDYE2BA6NHP3 402 aa12.85□□□□□ -0.35
CCDC110-205ENST00000506962 SPDYE6P0CI01 402 aa12.85□□□□□ -0.35
CCDC110-205ENST00000506962 SPDYE2Q495Y8 402 aa12.85□□□□□ -0.35
CCDC110-205ENST00000506962 DNAJC5Q9H3Z4 198 aa12.83□□□□□ -0.36
CCDC110-205ENST00000506962 ZNF692Q9BU19 519 aaPredicted RBP12.81□□□□□ -0.36
CCDC110-205ENST00000506962 PITPNM1O00562 1244 aa12.79□□□□□ -0.36
CCDC110-205ENST00000506962 CLEC11AQ9Y240 323 aa12.71□□□□□ -0.37
CCDC110-205ENST00000506962 PIP4P2Q8N4L2 257 aa12.69□□□□□ -0.38
CCDC110-205ENST00000506962 SSUH2Q9Y2M2 353 aa12.69□□□□□ -0.38
CCDC110-205ENST00000506962 PABPN1Q86U42 306 aaKnown RBP eCLIP12.64□□□□□ -0.39
CCDC110-205ENST00000506962 SPDYE1Q8NFV5 336 aaPredicted RBP12.61□□□□□ -0.39
CCDC110-205ENST00000506962 FXR2P51116 673 aaKnown RBP eCLIP12.6□□□□□ -0.39
CCDC110-205ENST00000506962 HAX1O00165 279 aa12.48□□□□□ -0.41
CCDC110-205ENST00000506962 PRKAR2AP13861 404 aaKnown RBP12.48□□□□□ -0.41
CCDC110-205ENST00000506962 SPDYE4A6NLX3 237 aa12.47□□□□□ -0.41
CCDC110-205ENST00000506962 PRR29P0C7W0 189 aa12.46□□□□□ -0.41
CCDC110-205ENST00000506962 CHADLQ6NUI6 762 aa12.44□□□□□ -0.42
CCDC110-205ENST00000506962 EVX2Q03828 476 aa12.34□□□□□ -0.43
CCDC110-205ENST00000506962 SP7Q8TDD2 431 aaPredicted RBP12.34□□□□□ -0.43
CCDC110-205ENST00000506962 MYO15BQ96JP2 1530 aa12.31□□□□□ -0.44
CCDC110-205ENST00000506962 ZCCHC6Q5VYS8 1495 aaKnown RBP12.29□□□□□ -0.44
CCDC110-205ENST00000506962 DCAF1Q9Y4B6 1507 aa12.28□□□□□ -0.44
CCDC110-205ENST00000506962 NACADO15069 1562 aa12.27□□□□□ -0.44
CCDC110-205ENST00000506962 DCAF8L2P0C7V8 631 aa12.26□□□□□ -0.45
CCDC110-205ENST00000506962 STAG3Q9UJ98 1225 aa12.23□□□□□ -0.45
CCDC110-205ENST00000506962 RB1CC1Q8TDY2 1594 aa12.22□□□□□ -0.45
CCDC110-205ENST00000506962 C19orf67A6NJJ6 358 aa12.19□□□□□ -0.46
CCDC110-205ENST00000506962 FARP1Q9Y4F1 1045 aaPredicted RBP12.19□□□□□ -0.46
CCDC110-205ENST00000506962 CREBZFQ9NS37 354 aa12.16□□□□□ -0.46
CCDC110-205ENST00000506962 CD44P16070 742 aaKnown RBP12.09□□□□□ -0.47
CCDC110-205ENST00000506962 FKBP8Q14318 412 aa12.07□□□□□ -0.48
CCDC110-205ENST00000506962 PROM2Q8N271 834 aa12.07□□□□□ -0.48
CCDC110-205ENST00000506962 GABBR2O75899 941 aa12.03□□□□□ -0.48
CCDC110-205ENST00000506962 ZRANB1Q9UGI0 708 aa11.98□□□□□ -0.49
CCDC110-205ENST00000506962 CECR2Q9BXF3 1484 aa11.96□□□□□ -0.49
CCDC110-205ENST00000506962 MNX1P50219 401 aaPredicted RBP11.94□□□□□ -0.5
CCDC110-205ENST00000506962 MIER1Q8N108 512 aa11.92□□□□□ -0.5
CCDC110-205ENST00000506962 NPM1P06748 294 aaKnown RBP eCLIP11.91□□□□□ -0.5
CCDC110-205ENST00000506962 PAK3O75914 559 aaPredicted RBP11.86□□□□□ -0.51
CCDC110-205ENST00000506962 BICRAQ9NZM4 1560 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms