RNA–Protein interactions for RNA: ENST00000506714.5

HERC6-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 2

Gene HERC6, Length 2,293 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-206ENST00000506714 POLR3GLQ9BT43 218 aa20.26■□□□□ 0.83
HERC6-206ENST00000506714 ZNF777Q9ULD5 760 aaPredicted RBP20.24■□□□□ 0.83
HERC6-206ENST00000506714 BRD4O60885 1362 aaPredicted RBP20.23■□□□□ 0.83
HERC6-206ENST00000506714 CARD11Q9BXL7 1154 aa20.22■□□□□ 0.83
HERC6-206ENST00000506714 NOP58Q9Y2X3 529 aaKnown RBP20.22■□□□□ 0.83
HERC6-206ENST00000506714 LRPPRCP42704 1394 aaKnown RBP20.22■□□□□ 0.83
HERC6-206ENST00000506714 RALBP1Q15311 655 aa20.22■□□□□ 0.83
HERC6-206ENST00000506714 PREX2Q70Z35 1606 aa20.21■□□□□ 0.83
HERC6-206ENST00000506714 E9PCH4 1651 aa20.21■□□□□ 0.83
HERC6-206ENST00000506714 NUP155O75694 1391 aa20.21■□□□□ 0.83
HERC6-206ENST00000506714 TTC37Q6PGP7 1564 aa20.2■□□□□ 0.82
HERC6-206ENST00000506714 C9orf84Q5VXU9 1444 aa20.19■□□□□ 0.82
HERC6-206ENST00000506714 MYBBP1AQ9BQG0 1328 aaKnown RBP20.19■□□□□ 0.82
HERC6-206ENST00000506714 CDC42BPBQ9Y5S2 1711 aa20.19■□□□□ 0.82
HERC6-206ENST00000506714 MYO5CQ9NQX4 1742 aa20.18■□□□□ 0.82
HERC6-206ENST00000506714 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.18■□□□□ 0.82
HERC6-206ENST00000506714 CNGB1Q14028 1251 aaPredicted RBP20.16■□□□□ 0.82
HERC6-206ENST00000506714 ANP32AP39687 249 aaKnown RBP20.16■□□□□ 0.82
HERC6-206ENST00000506714 ARHGEF5Q12774 1597 aa20.15■□□□□ 0.82
HERC6-206ENST00000506714 TSPY4P0CV99 314 aa20.15■□□□□ 0.82
HERC6-206ENST00000506714 TSPY10P0CW01 314 aa20.15■□□□□ 0.82
HERC6-206ENST00000506714 ST20-MTHFSA0A0A6YYL1 179 aa20.13■□□□□ 0.81
HERC6-206ENST00000506714 ARHGAP5Q13017 1502 aa20.12■□□□□ 0.81
HERC6-206ENST00000506714 IPO9Q96P70 1041 aaKnown RBP20.11■□□□□ 0.81
HERC6-206ENST00000506714 SAMD9LQ8IVG5 1584 aa20.11■□□□□ 0.81
HERC6-206ENST00000506714 PDE3BQ13370 1112 aa20.1■□□□□ 0.81
HERC6-206ENST00000506714 DCAF11Q8TEB1 546 aa20.09■□□□□ 0.81
HERC6-206ENST00000506714 TRPM1Q7Z4N2 1603 aa20.09■□□□□ 0.81
HERC6-206ENST00000506714 KDM2AQ9Y2K7 1162 aa20.08■□□□□ 0.81
HERC6-206ENST00000506714 WDR7Q9Y4E6 1490 aa20.08■□□□□ 0.81
HERC6-206ENST00000506714 DEKP35659 375 aaKnown RBP20.07■□□□□ 0.8
HERC6-206ENST00000506714 RRP1P56182 461 aaKnown RBP20.07■□□□□ 0.8
HERC6-206ENST00000506714 NLRP13Q86W25 1043 aa20.07■□□□□ 0.8
HERC6-206ENST00000506714 PHF23Q9BUL5 403 aaPredicted RBP20.07■□□□□ 0.8
HERC6-206ENST00000506714 PARD3Q8TEW0 1356 aa20.05■□□□□ 0.8
HERC6-206ENST00000506714 PAK3O75914 559 aaPredicted RBP20.05■□□□□ 0.8
HERC6-206ENST00000506714 ZBTB47Q9UFB7 747 aaPredicted RBP20.05■□□□□ 0.8
HERC6-206ENST00000506714 FAM135AQ9P2D6 1515 aa20.05■□□□□ 0.8
HERC6-206ENST00000506714 INSRP06213 1382 aa20.04■□□□□ 0.8
HERC6-206ENST00000506714 LAMC1P11047 1609 aa20.04■□□□□ 0.8
HERC6-206ENST00000506714 RSPH4AQ5TD94 716 aa20.04■□□□□ 0.8
HERC6-206ENST00000506714 RCAN3Q9UKA8 241 aa20.04■□□□□ 0.8
HERC6-206ENST00000506714 WASHC2CQ9Y4E1 1318 aa20.04■□□□□ 0.8
HERC6-206ENST00000506714 SYCP2Q9BX26 1530 aa20.04■□□□□ 0.8
HERC6-206ENST00000506714 PRAG1Q86YV5 1406 aa20.03■□□□□ 0.8
HERC6-206ENST00000506714 ZMYM4Q5VZL5 1548 aa20.03■□□□□ 0.8
HERC6-206ENST00000506714 TCERG1O14776 1098 aaKnown RBP20.02■□□□□ 0.8
HERC6-206ENST00000506714 CCDC141Q6ZP82 1450 aa20.02■□□□□ 0.8
HERC6-206ENST00000506714 HNRNPMP52272 730 aaKnown RBP eCLIP20.01■□□□□ 0.79
HERC6-206ENST00000506714 PLCH2O75038 1416 aa20.01■□□□□ 0.79
HERC6-206ENST00000506714 ASXL2Q76L83 1435 aa20.01■□□□□ 0.79
HERC6-206ENST00000506714 CCDC144AA2RUR9 1427 aa20■□□□□ 0.79
HERC6-206ENST00000506714 NPM1P06748 294 aaKnown RBP eCLIP20■□□□□ 0.79
HERC6-206ENST00000506714 PLEKHH2Q8IVE3 1493 aa20■□□□□ 0.79
HERC6-206ENST00000506714 GPRASP1Q5JY77 1395 aa20■□□□□ 0.79
HERC6-206ENST00000506714 ABCA9Q8IUA7 1624 aa19.99■□□□□ 0.79
HERC6-206ENST00000506714 UNC13BO14795 1591 aa19.98■□□□□ 0.79
HERC6-206ENST00000506714 NBR1Q14596 966 aa19.97■□□□□ 0.79
HERC6-206ENST00000506714 EXOC6Q8TAG9 804 aa19.97■□□□□ 0.79
HERC6-206ENST00000506714 SENP3-EIF4A1A0A087X0R7 540 aa19.97■□□□□ 0.79
HERC6-206ENST00000506714 PER1O15534 1290 aaPredicted RBP19.97■□□□□ 0.79
HERC6-206ENST00000506714 MS4A1P11836 297 aa19.97■□□□□ 0.79
HERC6-206ENST00000506714 EIF2AK4Q9P2K8 1649 aaKnown RBP19.97■□□□□ 0.79
HERC6-206ENST00000506714 ARAP3Q8WWN8 1544 aa19.97■□□□□ 0.79
HERC6-206ENST00000506714 MAST1Q9Y2H9 1570 aa19.96■□□□□ 0.79
HERC6-206ENST00000506714 PRDM15P57071 1507 aaPredicted RBP19.96■□□□□ 0.79
HERC6-206ENST00000506714 COL17A1Q9UMD9 1497 aaPredicted RBP19.96■□□□□ 0.79
HERC6-206ENST00000506714 RIMBP3CA6NJZ7 1639 aa19.95■□□□□ 0.78
HERC6-206ENST00000506714 RIMBP3BA6NNM3 1639 aa19.95■□□□□ 0.78
HERC6-206ENST00000506714 RIMBP3Q9UFD9 1639 aa19.95■□□□□ 0.78
HERC6-206ENST00000506714 RTL5Q5HYW3 569 aaPredicted RBP19.95■□□□□ 0.78
HERC6-206ENST00000506714 EFCAB2Q5VUJ9 269 aa19.95■□□□□ 0.78
HERC6-206ENST00000506714 ABCC1P33527 1531 aa19.94■□□□□ 0.78
HERC6-206ENST00000506714 BLMP54132 1417 aaPredicted RBP19.93■□□□□ 0.78
HERC6-206ENST00000506714 IQGAP3Q86VI3 1631 aa19.91■□□□□ 0.78
HERC6-206ENST00000506714 A2MP01023 1474 aa19.91■□□□□ 0.78
HERC6-206ENST00000506714 PDE4AP27815 886 aa19.9■□□□□ 0.78
HERC6-206ENST00000506714 FANCAO15360 1455 aa19.89■□□□□ 0.77
HERC6-206ENST00000506714 NBPF1Q3BBV0 1214 aa19.88■□□□□ 0.77
HERC6-206ENST00000506714 BACH2Q9BYV9 841 aa19.88■□□□□ 0.77
HERC6-206ENST00000506714 PLA2R1Q13018 1463 aa19.88■□□□□ 0.77
HERC6-206ENST00000506714 PLXNC1O60486 1568 aa19.88■□□□□ 0.77
HERC6-206ENST00000506714 TESK2Q96S53 571 aa19.87■□□□□ 0.77
HERC6-206ENST00000506714 SALL2Q9Y467 1007 aaPredicted RBP19.87■□□□□ 0.77
HERC6-206ENST00000506714 ERBINQ96RT1 1412 aa19.87■□□□□ 0.77
HERC6-206ENST00000506714 ATP10AO60312 1499 aa19.87■□□□□ 0.77
HERC6-206ENST00000506714 TMF1P82094 1093 aa19.86■□□□□ 0.77
HERC6-206ENST00000506714 RGL3Q3MIN7 710 aa19.86■□□□□ 0.77
HERC6-206ENST00000506714 CYB5RLQ6IPT4 315 aa19.86■□□□□ 0.77
HERC6-206ENST00000506714 DISP3Q9P2K9 1392 aa19.85■□□□□ 0.77
HERC6-206ENST00000506714 CDCA7LQ96GN5 454 aa19.85■□□□□ 0.77
HERC6-206ENST00000506714 PANK3Q9H999 370 aa19.83■□□□□ 0.77
HERC6-206ENST00000506714 RNF17Q9BXT8 1623 aaKnown RBP19.83■□□□□ 0.77
HERC6-206ENST00000506714 CC2D1BQ5T0F9 858 aaKnown RBP19.83■□□□□ 0.76
HERC6-206ENST00000506714 USP35Q9P2H5 1018 aa19.83■□□□□ 0.76
HERC6-206ENST00000506714 TRAPPC8Q9Y2L5 1435 aa19.83■□□□□ 0.76
HERC6-206ENST00000506714 NPM2Q86SE8 214 aaKnown RBP19.81■□□□□ 0.76
HERC6-206ENST00000506714 DUOX2Q9NRD8 1548 aa19.81■□□□□ 0.76
HERC6-206ENST00000506714 ADGRL1O94910 1474 aa19.8■□□□□ 0.76
HERC6-206ENST00000506714 CFAP74Q9C0B2 1584 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms