RNA–Protein interactions for RNA: ENST00000505306.5

ITGA3-204, Transcript of integrin subunit alpha 3, humanhuman

TSL 2

Gene ITGA3, Length 5,479 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-204ENST00000505306 AFAP1Q8N556 730 aa21.04■□□□□ 0.96
ITGA3-204ENST00000505306 ZNF644Q9H582 1327 aaPredicted RBP21.04■□□□□ 0.96
ITGA3-204ENST00000505306 IFT140Q96RY7 1462 aa21.03■□□□□ 0.96
ITGA3-204ENST00000505306 ST20-MTHFSA0A0A6YYL1 179 aa21.02■□□□□ 0.96
ITGA3-204ENST00000505306 MYOM3Q5VTT5 1437 aa21.02■□□□□ 0.96
ITGA3-204ENST00000505306 C1orf141Q5JVX7 400 aa21.02■□□□□ 0.96
ITGA3-204ENST00000505306 KIF15Q9NS87 1388 aa21■□□□□ 0.95
ITGA3-204ENST00000505306 ITPRIPQ8IWB1 547 aa21■□□□□ 0.95
ITGA3-204ENST00000505306 PRDM2Q13029 1718 aa21■□□□□ 0.95
ITGA3-204ENST00000505306 HDAC5Q9UQL6 1122 aa20.99■□□□□ 0.95
ITGA3-204ENST00000505306 CCDC146Q8IYE0 955 aa20.98■□□□□ 0.95
ITGA3-204ENST00000505306 PHF23Q9BUL5 403 aaPredicted RBP20.98■□□□□ 0.95
ITGA3-204ENST00000505306 SLC4A10Q6U841 1118 aa20.98■□□□□ 0.95
ITGA3-204ENST00000505306 CFTRP13569 1480 aa20.97■□□□□ 0.95
ITGA3-204ENST00000505306 SYNJ2O15056 1496 aa20.97■□□□□ 0.95
ITGA3-204ENST00000505306 SYTL4Q96C24 671 aaPredicted RBP20.96■□□□□ 0.95
ITGA3-204ENST00000505306 CGNL1Q0VF96 1302 aa20.96■□□□□ 0.95
ITGA3-204ENST00000505306 DNAJC5BQ9UF47 199 aa20.96■□□□□ 0.95
ITGA3-204ENST00000505306 MCCP23508 829 aa20.95■□□□□ 0.94
ITGA3-204ENST00000505306 SMC4Q9NTJ3 1288 aa20.95■□□□□ 0.94
ITGA3-204ENST00000505306 PANK3Q9H999 370 aa20.95■□□□□ 0.94
ITGA3-204ENST00000505306 TEFQ10587 303 aa20.94■□□□□ 0.94
ITGA3-204ENST00000505306 NLRP13Q86W25 1043 aa20.94■□□□□ 0.94
ITGA3-204ENST00000505306 ARHGAP5Q13017 1502 aa20.93■□□□□ 0.94
ITGA3-204ENST00000505306 TXNDC2Q86VQ3 553 aa20.93■□□□□ 0.94
ITGA3-204ENST00000505306 FRAT2O75474 233 aaPredicted RBP20.92■□□□□ 0.94
ITGA3-204ENST00000505306 KIAA1211Q6ZU35 1233 aa20.92■□□□□ 0.94
ITGA3-204ENST00000505306 HSP90AB1P08238 724 aaKnown RBP20.92■□□□□ 0.94
ITGA3-204ENST00000505306 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.92■□□□□ 0.94
ITGA3-204ENST00000505306 TTC5Q8N0Z6 440 aa20.91■□□□□ 0.94
ITGA3-204ENST00000505306 PROSER2Q86WR7 435 aaPredicted RBP20.91■□□□□ 0.94
ITGA3-204ENST00000505306 DHX57Q6P158 1386 aaKnown RBP20.89■□□□□ 0.93
ITGA3-204ENST00000505306 PTMAP06454 111 aaKnown RBP20.88■□□□□ 0.93
ITGA3-204ENST00000505306 SNAPC4Q5SXM2 1469 aa20.87■□□□□ 0.93
ITGA3-204ENST00000505306 RRP7AQ9Y3A4 280 aaKnown RBP20.87■□□□□ 0.93
ITGA3-204ENST00000505306 CFAP44Q96MT7 982 aa20.86■□□□□ 0.93
ITGA3-204ENST00000505306 RCAN3Q9UKA8 241 aa20.86■□□□□ 0.93
ITGA3-204ENST00000505306 HMMRO75330 724 aa20.86■□□□□ 0.93
ITGA3-204ENST00000505306 THEMISQ8N1K5 641 aaPredicted RBP20.85■□□□□ 0.93
ITGA3-204ENST00000505306 IPO9Q96P70 1041 aaKnown RBP20.85■□□□□ 0.93
ITGA3-204ENST00000505306 TOPBP1Q92547 1522 aa20.85■□□□□ 0.93
ITGA3-204ENST00000505306 GPATCH3Q96I76 525 aa20.84■□□□□ 0.93
ITGA3-204ENST00000505306 CENPJQ9HC77 1338 aaPredicted RBP20.84■□□□□ 0.93
ITGA3-204ENST00000505306 RAPGEF3O95398 923 aa20.84■□□□□ 0.93
ITGA3-204ENST00000505306 CLSTN1O94985 981 aa20.84■□□□□ 0.93
ITGA3-204ENST00000505306 RWDD1Q9H446 243 aaPredicted RBP20.84■□□□□ 0.93
ITGA3-204ENST00000505306 NGEFQ8N5V2 710 aa20.84■□□□□ 0.93
ITGA3-204ENST00000505306 CLUAP1Q96AJ1 413 aa20.84■□□□□ 0.93
ITGA3-204ENST00000505306 GOLGA6L4A6NEF3 574 aa20.83■□□□□ 0.93
ITGA3-204ENST00000505306 ELL2O00472 640 aaPredicted RBP20.83■□□□□ 0.93
ITGA3-204ENST00000505306 ANKRD50Q9ULJ7 1429 aa20.83■□□□□ 0.93
ITGA3-204ENST00000505306 GNL2Q13823 731 aaKnown RBP20.83■□□□□ 0.92
ITGA3-204ENST00000505306 DNTTIP2Q5QJE6 756 aaKnown RBP20.83■□□□□ 0.92
ITGA3-204ENST00000505306 NUTM2GQ5VZR2 741 aa20.83■□□□□ 0.92
ITGA3-204ENST00000505306 FGD6Q6ZV73 1430 aa20.82■□□□□ 0.92
ITGA3-204ENST00000505306 RAPGEF4Q8WZA2 1011 aa20.82■□□□□ 0.92
ITGA3-204ENST00000505306 TMEM132EQ6IEE7 984 aa20.81■□□□□ 0.92
ITGA3-204ENST00000505306 KLHL34Q8N239 644 aa20.81■□□□□ 0.92
ITGA3-204ENST00000505306 NLRP2Q9NX02 1062 aa20.81■□□□□ 0.92
ITGA3-204ENST00000505306 CUX1P39880 1505 aa20.8■□□□□ 0.92
ITGA3-204ENST00000505306 ESCO1Q5FWF5 840 aa20.8■□□□□ 0.92
ITGA3-204ENST00000505306 USP47Q96K76 1375 aa20.8■□□□□ 0.92
ITGA3-204ENST00000505306 STAC3Q96MF2 364 aa20.79■□□□□ 0.92
ITGA3-204ENST00000505306 L1TD1Q5T7N2 865 aaKnown RBP20.79■□□□□ 0.92
ITGA3-204ENST00000505306 SCAPERQ9BY12 1400 aa20.79■□□□□ 0.92
ITGA3-204ENST00000505306 POLA1P09884 1462 aaPredicted RBP20.79■□□□□ 0.92
ITGA3-204ENST00000505306 HMGXB3Q12766 1538 aa20.79■□□□□ 0.92
ITGA3-204ENST00000505306 PHLDB1Q86UU1 1377 aa20.79■□□□□ 0.92
ITGA3-204ENST00000505306 HSCBQ8IWL3 235 aa20.78■□□□□ 0.92
ITGA3-204ENST00000505306 NLRP6P59044 892 aa20.78■□□□□ 0.92
ITGA3-204ENST00000505306 DIAPH1O60610 1272 aaKnown RBP20.78■□□□□ 0.92
ITGA3-204ENST00000505306 EIF2S2P20042 333 aaKnown RBP20.78■□□□□ 0.92
ITGA3-204ENST00000505306 CASKIN1Q8WXD9 1431 aa20.77■□□□□ 0.92
ITGA3-204ENST00000505306 GPRASP1Q5JY77 1395 aa20.76■□□□□ 0.91
ITGA3-204ENST00000505306 TRIM6-TRIM34B2RNG4 842 aa20.76■□□□□ 0.91
ITGA3-204ENST00000505306 PLCB2Q00722 1185 aa20.76■□□□□ 0.91
ITGA3-204ENST00000505306 POGZQ7Z3K3 1410 aa20.76■□□□□ 0.91
ITGA3-204ENST00000505306 TCERG1O14776 1098 aaKnown RBP20.76■□□□□ 0.91
ITGA3-204ENST00000505306 USP35Q9P2H5 1018 aa20.76■□□□□ 0.91
ITGA3-204ENST00000505306 MYBBP1AQ9BQG0 1328 aaKnown RBP20.75■□□□□ 0.91
ITGA3-204ENST00000505306 NEXNQ0ZGT2 675 aa20.75■□□□□ 0.91
ITGA3-204ENST00000505306 FANCIQ9NVI1 1328 aa20.75■□□□□ 0.91
ITGA3-204ENST00000505306 ANKLE2Q86XL3 938 aa20.74■□□□□ 0.91
ITGA3-204ENST00000505306 NCOA2Q15596 1464 aa20.74■□□□□ 0.91
ITGA3-204ENST00000505306 CABP2Q9NPB3 220 aa20.74■□□□□ 0.91
ITGA3-204ENST00000505306 FYCO1Q9BQS8 1478 aa20.73■□□□□ 0.91
ITGA3-204ENST00000505306 TOMM22Q9NS69 142 aa20.72■□□□□ 0.91
ITGA3-204ENST00000505306 ABTB2Q8N961 1025 aa20.71■□□□□ 0.91
ITGA3-204ENST00000505306 PMFBP1Q8TBY8 1022 aa20.71■□□□□ 0.91
ITGA3-204ENST00000505306 NUTM2BA6NNL0 878 aaPredicted RBP20.7■□□□□ 0.9
ITGA3-204ENST00000505306 NUTM2EB1AL46 878 aaPredicted RBP20.7■□□□□ 0.9
ITGA3-204ENST00000505306 NUTM2AQ8IVF1 878 aaPredicted RBP20.7■□□□□ 0.9
ITGA3-204ENST00000505306 PIP4K2BP78356 416 aa20.7■□□□□ 0.9
ITGA3-204ENST00000505306 MIA2Q96PC5 1412 aa20.69■□□□□ 0.9
ITGA3-204ENST00000505306 LRRC9Q6ZRR7 1453 aa20.69■□□□□ 0.9
ITGA3-204ENST00000505306 NECTIN2Q92692 538 aa20.68■□□□□ 0.9
ITGA3-204ENST00000505306 GGNBP2Q9H3C7 697 aa20.68■□□□□ 0.9
ITGA3-204ENST00000505306 CFAP70Q5T0N1 1121 aa20.68■□□□□ 0.9
ITGA3-204ENST00000505306 STRN4Q9NRL3 753 aa20.67■□□□□ 0.9
ITGA3-204ENST00000505306 PDE3BQ13370 1112 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms