RNA–Protein interactions for RNA: ENST00000504000.1

SNF8-203, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 1,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-203ENST00000504000 CCDC141Q6ZP82 1450 aa20.17■□□□□ 0.82
SNF8-203ENST00000504000 ST20-MTHFSA0A0A6YYL1 179 aa20.16■□□□□ 0.82
SNF8-203ENST00000504000 FAM135AQ9P2D6 1515 aa20.15■□□□□ 0.82
SNF8-203ENST00000504000 LAMC1P11047 1609 aa20.15■□□□□ 0.82
SNF8-203ENST00000504000 ERCC6Q03468 1493 aa20.15■□□□□ 0.82
SNF8-203ENST00000504000 ZMYM4Q5VZL5 1548 aa20.15■□□□□ 0.82
SNF8-203ENST00000504000 WASHC2CQ9Y4E1 1318 aa20.15■□□□□ 0.82
SNF8-203ENST00000504000 GPRASP1Q5JY77 1395 aa20.15■□□□□ 0.82
SNF8-203ENST00000504000 MAST1Q9Y2H9 1570 aa20.14■□□□□ 0.81
SNF8-203ENST00000504000 CCDC136Q96JN2 1154 aa20.14■□□□□ 0.81
SNF8-203ENST00000504000 TRPM1Q7Z4N2 1603 aa20.14■□□□□ 0.81
SNF8-203ENST00000504000 POLR3GLQ9BT43 218 aa20.13■□□□□ 0.81
SNF8-203ENST00000504000 PREX2Q70Z35 1606 aa20.13■□□□□ 0.81
SNF8-203ENST00000504000 PDE3BQ13370 1112 aa20.13■□□□□ 0.81
SNF8-203ENST00000504000 BCL11AQ9H165 835 aa20.13■□□□□ 0.81
SNF8-203ENST00000504000 PRAG1Q86YV5 1406 aa20.13■□□□□ 0.81
SNF8-203ENST00000504000 DCAF11Q8TEB1 546 aa20.12■□□□□ 0.81
SNF8-203ENST00000504000 PARD3Q8TEW0 1356 aa20.12■□□□□ 0.81
SNF8-203ENST00000504000 UNC13BO14795 1591 aa20.11■□□□□ 0.81
SNF8-203ENST00000504000 SAMD9LQ8IVG5 1584 aa20.11■□□□□ 0.81
SNF8-203ENST00000504000 NLRP13Q86W25 1043 aa20.1■□□□□ 0.81
SNF8-203ENST00000504000 CDC42BPBQ9Y5S2 1711 aa20.09■□□□□ 0.81
SNF8-203ENST00000504000 CCDC144AA2RUR9 1427 aa20.09■□□□□ 0.81
SNF8-203ENST00000504000 HNRNPMP52272 730 aaKnown RBP eCLIP20.08■□□□□ 0.81
SNF8-203ENST00000504000 FBLN2P98095 1184 aa20.08■□□□□ 0.81
SNF8-203ENST00000504000 ATP10AO60312 1499 aa20.07■□□□□ 0.8
SNF8-203ENST00000504000 NOP58Q9Y2X3 529 aaKnown RBP20.07■□□□□ 0.8
SNF8-203ENST00000504000 KDM2AQ9Y2K7 1162 aa20.06■□□□□ 0.8
SNF8-203ENST00000504000 PER1O15534 1290 aaPredicted RBP20.05■□□□□ 0.8
SNF8-203ENST00000504000 PRDM15P57071 1507 aaPredicted RBP20.05■□□□□ 0.8
SNF8-203ENST00000504000 EIF2AK4Q9P2K8 1649 aaKnown RBP20.05■□□□□ 0.8
SNF8-203ENST00000504000 COL17A1Q9UMD9 1497 aaPredicted RBP20.04■□□□□ 0.8
SNF8-203ENST00000504000 PLXNC1O60486 1568 aa20.04■□□□□ 0.8
SNF8-203ENST00000504000 IQGAP3Q86VI3 1631 aa20.03■□□□□ 0.8
SNF8-203ENST00000504000 RRP1P56182 461 aaKnown RBP20.03■□□□□ 0.8
SNF8-203ENST00000504000 PLA2R1Q13018 1463 aa20.03■□□□□ 0.8
SNF8-203ENST00000504000 PLEKHH2Q8IVE3 1493 aa20.03■□□□□ 0.8
SNF8-203ENST00000504000 A2MP01023 1474 aa20.01■□□□□ 0.79
SNF8-203ENST00000504000 ANP32AP39687 249 aaKnown RBP20.01■□□□□ 0.79
SNF8-203ENST00000504000 IPO9Q96P70 1041 aaKnown RBP20■□□□□ 0.79
SNF8-203ENST00000504000 MAGI2Q86UL8 1455 aa20■□□□□ 0.79
SNF8-203ENST00000504000 RCAN3Q9UKA8 241 aa19.99■□□□□ 0.79
SNF8-203ENST00000504000 CNGB1Q14028 1251 aaPredicted RBP19.98■□□□□ 0.79
SNF8-203ENST00000504000 BLMP54132 1417 aaPredicted RBP19.97■□□□□ 0.79
SNF8-203ENST00000504000 SYCP2Q9BX26 1530 aa19.97■□□□□ 0.79
SNF8-203ENST00000504000 TCERG1O14776 1098 aaKnown RBP19.97■□□□□ 0.79
SNF8-203ENST00000504000 TESK2Q96S53 571 aa19.96■□□□□ 0.79
SNF8-203ENST00000504000 DUOX2Q9NRD8 1548 aa19.96■□□□□ 0.79
SNF8-203ENST00000504000 ERBINQ96RT1 1412 aa19.95■□□□□ 0.78
SNF8-203ENST00000504000 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.94■□□□□ 0.78
SNF8-203ENST00000504000 ARHGAP5Q13017 1502 aa19.93■□□□□ 0.78
SNF8-203ENST00000504000 MS4A1P11836 297 aa19.93■□□□□ 0.78
SNF8-203ENST00000504000 NBPF1Q3BBV0 1214 aa19.92■□□□□ 0.78
SNF8-203ENST00000504000 RNF17Q9BXT8 1623 aaKnown RBP19.92■□□□□ 0.78
SNF8-203ENST00000504000 TTC37Q6PGP7 1564 aa19.92■□□□□ 0.78
SNF8-203ENST00000504000 MYO5CQ9NQX4 1742 aa19.92■□□□□ 0.78
SNF8-203ENST00000504000 SHROOM2Q13796 1616 aa19.92■□□□□ 0.78
SNF8-203ENST00000504000 TMF1P82094 1093 aa19.91■□□□□ 0.78
SNF8-203ENST00000504000 DISP3Q9P2K9 1392 aa19.9■□□□□ 0.78
SNF8-203ENST00000504000 STAC3Q96MF2 364 aa19.9■□□□□ 0.78
SNF8-203ENST00000504000 PAK3O75914 559 aaPredicted RBP19.89■□□□□ 0.77
SNF8-203ENST00000504000 EXOC6Q8TAG9 804 aa19.89■□□□□ 0.77
SNF8-203ENST00000504000 ZBTB47Q9UFB7 747 aaPredicted RBP19.88■□□□□ 0.77
SNF8-203ENST00000504000 ABCC2Q92887 1545 aa19.86■□□□□ 0.77
SNF8-203ENST00000504000 RGL3Q3MIN7 710 aa19.86■□□□□ 0.77
SNF8-203ENST00000504000 PANK3Q9H999 370 aa19.85■□□□□ 0.77
SNF8-203ENST00000504000 DEKP35659 375 aaKnown RBP19.84■□□□□ 0.77
SNF8-203ENST00000504000 PLCH2O75038 1416 aa19.83■□□□□ 0.76
SNF8-203ENST00000504000 BACH2Q9BYV9 841 aa19.82■□□□□ 0.76
SNF8-203ENST00000504000 WDR7Q9Y4E6 1490 aa19.81■□□□□ 0.76
SNF8-203ENST00000504000 SCAPERQ9BY12 1400 aa19.8■□□□□ 0.76
SNF8-203ENST00000504000 IQGAP1P46940 1657 aa19.8■□□□□ 0.76
SNF8-203ENST00000504000 PDE4AP27815 886 aa19.8■□□□□ 0.76
SNF8-203ENST00000504000 SENP3-EIF4A1A0A087X0R7 540 aa19.79■□□□□ 0.76
SNF8-203ENST00000504000 CDCA8Q53HL2 280 aa19.79■□□□□ 0.76
SNF8-203ENST00000504000 CDCA7LQ96GN5 454 aa19.79■□□□□ 0.76
SNF8-203ENST00000504000 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.79■□□□□ 0.76
SNF8-203ENST00000504000 MADDQ8WXG6 1647 aa19.79■□□□□ 0.76
SNF8-203ENST00000504000 CC2D1BQ5T0F9 858 aaKnown RBP19.79■□□□□ 0.76
SNF8-203ENST00000504000 NPC1L1Q9UHC9 1359 aa19.79■□□□□ 0.76
SNF8-203ENST00000504000 RTEL1-TNFRSF6BF6WH68 1400 aa19.78■□□□□ 0.76
SNF8-203ENST00000504000 CLASP1Q7Z460 1538 aa19.78■□□□□ 0.76
SNF8-203ENST00000504000 SYNMO15061 1565 aa19.78■□□□□ 0.76
SNF8-203ENST00000504000 TRPM2O94759 1503 aa19.77■□□□□ 0.76
SNF8-203ENST00000504000 NEURL4Q96JN8 1562 aa19.77■□□□□ 0.76
SNF8-203ENST00000504000 ABCC1P33527 1531 aa19.77■□□□□ 0.76
SNF8-203ENST00000504000 CHD1O14646 1710 aa19.76■□□□□ 0.75
SNF8-203ENST00000504000 ARAP3Q8WWN8 1544 aa19.76■□□□□ 0.75
SNF8-203ENST00000504000 PTPRTO14522 1441 aa19.76■□□□□ 0.75
SNF8-203ENST00000504000 EFCAB2Q5VUJ9 269 aa19.76■□□□□ 0.75
SNF8-203ENST00000504000 UHRF1BP1LA0JNW5 1464 aa19.76■□□□□ 0.75
SNF8-203ENST00000504000 SPHKAPQ2M3C7 1700 aa19.75■□□□□ 0.75
SNF8-203ENST00000504000 SALL2Q9Y467 1007 aaPredicted RBP19.75■□□□□ 0.75
SNF8-203ENST00000504000 SCAF11Q99590 1463 aaKnown RBP19.74■□□□□ 0.75
SNF8-203ENST00000504000 PIK3C2GO75747 1445 aa19.74■□□□□ 0.75
SNF8-203ENST00000504000 SLC24A1O60721 1099 aa19.74■□□□□ 0.75
SNF8-203ENST00000504000 USP35Q9P2H5 1018 aa19.74■□□□□ 0.75
SNF8-203ENST00000504000 ZNF521Q96K83 1311 aa19.73■□□□□ 0.75
SNF8-203ENST00000504000 CEP152O94986 1710 aa19.73■□□□□ 0.75
SNF8-203ENST00000504000 RTL5Q5HYW3 569 aaPredicted RBP19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms