RNA–Protein interactions for RNA: ENST00000502944.1

MATR3-204, Transcript of matrin 3, humanhuman

TSL 2

Gene MATR3, Length 362 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-204ENST00000502944 FANCD2Q9BXW9 1451 aa10.47□□□□□ -0.73
MATR3-204ENST00000502944 HOXB1P14653 301 aaPredicted RBP10.46□□□□□ -0.73
MATR3-204ENST00000502944 KHSRPQ92945 711 aaKnown RBP eCLIP10.46□□□□□ -0.73
MATR3-204ENST00000502944 TBC1D12O60347 775 aa10.45□□□□□ -0.74
MATR3-204ENST00000502944 PCDHGA4Q9Y5G9 962 aa10.45□□□□□ -0.74
MATR3-204ENST00000502944 SLC34A2O95436 690 aa10.44□□□□□ -0.74
MATR3-204ENST00000502944 MFSD10Q14728 455 aa10.44□□□□□ -0.74
MATR3-204ENST00000502944 GPR153Q6NV75 609 aa10.44□□□□□ -0.74
MATR3-204ENST00000502944 FHAD1B1AJZ9 1412 aa10.43□□□□□ -0.74
MATR3-204ENST00000502944 FAM205CA6NFA0 338 aa10.43□□□□□ -0.74
MATR3-204ENST00000502944 ERBB3P21860 1342 aa10.42□□□□□ -0.74
MATR3-204ENST00000502944 NUDT7P0C024 238 aa10.42□□□□□ -0.74
MATR3-204ENST00000502944 PTCD2Q8WV60 388 aaKnown RBP10.41□□□□□ -0.74
MATR3-204ENST00000502944 FGD5Q6ZNL6 1462 aa10.41□□□□□ -0.74
MATR3-204ENST00000502944 PRDM2Q13029 1718 aa10.41□□□□□ -0.74
MATR3-204ENST00000502944 LAMC3Q9Y6N6 1575 aa10.4□□□□□ -0.74
MATR3-204ENST00000502944 MAP3K9P80192 1104 aa10.4□□□□□ -0.74
MATR3-204ENST00000502944 DNMBPQ6XZF7 1577 aa10.38□□□□□ -0.75
MATR3-204ENST00000502944 MAP3K1Q13233 1512 aa10.37□□□□□ -0.75
MATR3-204ENST00000502944 ZNF316A6NFI3 1004 aaPredicted RBP10.36□□□□□ -0.75
MATR3-204ENST00000502944 OXER1Q8TDS5 423 aa10.36□□□□□ -0.75
MATR3-204ENST00000502944 ABCA10Q8WWZ4 1543 aa10.36□□□□□ -0.75
MATR3-204ENST00000502944 ACIN1Q9UKV3 1341 aaKnown RBP10.35□□□□□ -0.75
MATR3-204ENST00000502944 E2F4Q16254 413 aa10.35□□□□□ -0.75
MATR3-204ENST00000502944 VARS2Q5ST30 1063 aaKnown RBP10.35□□□□□ -0.75
MATR3-204ENST00000502944 HS3ST6Q96QI5 342 aa10.35□□□□□ -0.75
MATR3-204ENST00000502944 EMILIN3Q9NT22 766 aa10.35□□□□□ -0.75
MATR3-204ENST00000502944 DIEXFQ68CQ4 756 aaKnown RBP10.34□□□□□ -0.75
MATR3-204ENST00000502944 ATP1B4Q9UN42 357 aaPredicted RBP10.34□□□□□ -0.75
MATR3-204ENST00000502944 TOPBP1Q92547 1522 aa10.33□□□□□ -0.76
MATR3-204ENST00000502944 LHX6Q9UPM6 363 aa10.33□□□□□ -0.76
MATR3-204ENST00000502944 ARAP1Q96P48 1450 aa10.32□□□□□ -0.76
MATR3-204ENST00000502944 CENPBP07199 599 aaPredicted RBP10.32□□□□□ -0.76
MATR3-204ENST00000502944 CDAN1Q8IWY9 1227 aa10.32□□□□□ -0.76
MATR3-204ENST00000502944 ARHGAP35Q9NRY4 1499 aa10.31□□□□□ -0.76
MATR3-204ENST00000502944 CCNB3Q8WWL7 1395 aa10.31□□□□□ -0.76
MATR3-204ENST00000502944 EVI5O60447 810 aa10.31□□□□□ -0.76
MATR3-204ENST00000502944 FMN1Q68DA7 1419 aa10.31□□□□□ -0.76
MATR3-204ENST00000502944 POTEB3A0JP26 581 aa10.3□□□□□ -0.76
MATR3-204ENST00000502944 DPYSL4O14531 572 aa10.3□□□□□ -0.76
MATR3-204ENST00000502944 CAMK2BQ13554 666 aa10.3□□□□□ -0.76
MATR3-204ENST00000502944 POTEBQ6S5H4 581 aa10.3□□□□□ -0.76
MATR3-204ENST00000502944 POLA1P09884 1462 aaPredicted RBP10.3□□□□□ -0.76
MATR3-204ENST00000502944 KANK4Q5T7N3 995 aaPredicted RBP10.29□□□□□ -0.76
MATR3-204ENST00000502944 RRBP1Q9P2E9 1410 aaKnown RBP10.29□□□□□ -0.76
MATR3-204ENST00000502944 EFCAB5A4FU69 1503 aa10.28□□□□□ -0.76
MATR3-204ENST00000502944 TIMELESSQ9UNS1 1208 aa10.28□□□□□ -0.76
MATR3-204ENST00000502944 CUL7Q14999 1698 aa10.28□□□□□ -0.76
MATR3-204ENST00000502944 GAPVD1Q14C86 1478 aa10.27□□□□□ -0.77
MATR3-204ENST00000502944 AQRO60306 1485 aaKnown RBP eCLIP10.26□□□□□ -0.772e-9■■□□□ 12.9
MATR3-204ENST00000502944 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.26□□□□□ -0.77
MATR3-204ENST00000502944 RAD54L2Q9Y4B4 1467 aa10.25□□□□□ -0.77
MATR3-204ENST00000502944 PCDH10Q9P2E7 1040 aa10.25□□□□□ -0.77
MATR3-204ENST00000502944 KDM4FA0A1W2PPD8 638 aa10.24□□□□□ -0.77
MATR3-204ENST00000502944 PSDA5PKW4 1024 aaPredicted RBP10.24□□□□□ -0.77
MATR3-204ENST00000502944 P3H3Q8IVL6 736 aa10.24□□□□□ -0.77
MATR3-204ENST00000502944 CASKIN1Q8WXD9 1431 aa10.24□□□□□ -0.77
MATR3-204ENST00000502944 NESP48681 1621 aa10.23□□□□□ -0.77
MATR3-204ENST00000502944 FAM50AQ14320 339 aaKnown RBP10.23□□□□□ -0.77
MATR3-204ENST00000502944 ZNF687Q8N1G0 1237 aa10.23□□□□□ -0.77
MATR3-204ENST00000502944 ZNF454Q8N9F8 522 aa10.23□□□□□ -0.77
MATR3-204ENST00000502944 CDK11AQ9UQ88 783 aaPredicted RBP10.23□□□□□ -0.77
MATR3-204ENST00000502944 TDRD9Q8NDG6 1382 aaKnown RBP10.23□□□□□ -0.77
MATR3-204ENST00000502944 PPP4R3BQ5MIZ7 849 aa10.22□□□□□ -0.77
MATR3-204ENST00000502944 VSIG10Q8N0Z9 540 aa10.22□□□□□ -0.77
MATR3-204ENST00000502944 ANO8Q9HCE9 1232 aaPredicted RBP10.22□□□□□ -0.77
MATR3-204ENST00000502944 KDM2AQ9Y2K7 1162 aa10.22□□□□□ -0.77
MATR3-204ENST00000502944 LRRC9Q6ZRR7 1453 aa10.22□□□□□ -0.77
MATR3-204ENST00000502944 FYCO1Q9BQS8 1478 aa10.21□□□□□ -0.78
MATR3-204ENST00000502944 ITGAEP38570 1179 aa10.2□□□□□ -0.78
MATR3-204ENST00000502944 URB2Q14146 1524 aaKnown RBP10.2□□□□□ -0.78
MATR3-204ENST00000502944 MTUS2Q5JR59 1369 aa10.2□□□□□ -0.78
MATR3-204ENST00000502944 SETD5Q9C0A6 1442 aa10.2□□□□□ -0.78
MATR3-204ENST00000502944 KCNV2Q8TDN2 545 aa10.19□□□□□ -0.78
MATR3-204ENST00000502944 TIAM1Q13009 1591 aa10.18□□□□□ -0.78
MATR3-204ENST00000502944 MRC2Q9UBG0 1479 aa10.18□□□□□ -0.78
MATR3-204ENST00000502944 SPDYE16A6NNV3 312 aaPredicted RBP10.18□□□□□ -0.78
MATR3-204ENST00000502944 DDX12PQ92771 950 aa10.18□□□□□ -0.78
MATR3-204ENST00000502944 AXIN2Q9Y2T1 843 aa10.18□□□□□ -0.78
MATR3-204ENST00000502944 IFT140Q96RY7 1462 aa10.17□□□□□ -0.78
MATR3-204ENST00000502944 ARHGEF1Q92888 912 aaKnown RBP10.17□□□□□ -0.78
MATR3-204ENST00000502944 DHX57Q6P158 1386 aaKnown RBP10.16□□□□□ -0.78
MATR3-204ENST00000502944 GRIN2BQ13224 1484 aa10.16□□□□□ -0.78
MATR3-204ENST00000502944 GRXCR2A6NFK2 248 aa10.15□□□□□ -0.78
MATR3-204ENST00000502944 FOSBP53539 338 aa10.15□□□□□ -0.78
MATR3-204ENST00000502944 PDIA6Q15084 440 aa10.15□□□□□ -0.78
MATR3-204ENST00000502944 ANKRD13DQ6ZTN6 518 aa10.15□□□□□ -0.78
MATR3-204ENST00000502944 ZDHHC16Q969W1 377 aa10.15□□□□□ -0.78
MATR3-204ENST00000502944 JPH4Q96JJ6 628 aa10.15□□□□□ -0.78
MATR3-204ENST00000502944 WDR97A6NE52 1622 aa10.15□□□□□ -0.79
MATR3-204ENST00000502944 KCNH8Q96L42 1107 aa10.14□□□□□ -0.79
MATR3-204ENST00000502944 ARIH1Q9Y4X5 557 aaPredicted RBP10.14□□□□□ -0.79
MATR3-204ENST00000502944 FHOD3Q2V2M9 1422 aa10.14□□□□□ -0.79
MATR3-204ENST00000502944 CCDC18Q5T9S5 1454 aa10.13□□□□□ -0.79
MATR3-204ENST00000502944 KRTAP3-3Q9BYR6 98 aa10.13□□□□□ -0.79
MATR3-204ENST00000502944 KRTAP3-2Q9BYR7 98 aa10.13□□□□□ -0.79
MATR3-204ENST00000502944 PCDHGA10Q9Y5H3 936 aa10.13□□□□□ -0.79
MATR3-204ENST00000502944 ARHGAP33O14559 1287 aa10.12□□□□□ -0.79
MATR3-204ENST00000502944 PHF14O94880 888 aa10.12□□□□□ -0.79
MATR3-204ENST00000502944 PSEN2P49810 448 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms