RNA–Protein interactions for RNA: ENST00000497390.5

PCBP4-216, Transcript of poly(rC) binding protein 4, humanhuman

TSL 2

Gene PCBP4, Length 2,434 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCBP4-216ENST00000497390 NUDCQ9Y266 331 aa22.17■■□□□ 1.14
PCBP4-216ENST00000497390 SYCP2Q9BX26 1530 aa22.16■■□□□ 1.14
PCBP4-216ENST00000497390 SALL2Q9Y467 1007 aaPredicted RBP22.16■■□□□ 1.14
PCBP4-216ENST00000497390 ARHGEF5Q12774 1597 aa22.15■■□□□ 1.14
PCBP4-216ENST00000497390 CCDC141Q6ZP82 1450 aa22.15■■□□□ 1.14
PCBP4-216ENST00000497390 TTC37Q6PGP7 1564 aa22.15■■□□□ 1.14
PCBP4-216ENST00000497390 PREX2Q70Z35 1606 aa22.14■■□□□ 1.13
PCBP4-216ENST00000497390 ARID4BQ4LE39 1312 aaPredicted RBP22.13■■□□□ 1.13
PCBP4-216ENST00000497390 PLA2R1Q13018 1463 aa22.13■■□□□ 1.13
PCBP4-216ENST00000497390 FANCIQ9NVI1 1328 aa22.12■■□□□ 1.13
PCBP4-216ENST00000497390 ERCC6L2Q5T890 1561 aa22.12■■□□□ 1.13
PCBP4-216ENST00000497390 E9PCH4 1651 aa22.1■■□□□ 1.13
PCBP4-216ENST00000497390 CHD1O14646 1710 aa22.09■■□□□ 1.13
PCBP4-216ENST00000497390 PRAG1Q86YV5 1406 aa22.09■■□□□ 1.13
PCBP4-216ENST00000497390 CCDC144AA2RUR9 1427 aa22.09■■□□□ 1.13
PCBP4-216ENST00000497390 ARHGAP5Q13017 1502 aa22.08■■□□□ 1.13
PCBP4-216ENST00000497390 TRPM1Q7Z4N2 1603 aa22.08■■□□□ 1.13
PCBP4-216ENST00000497390 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.07■■□□□ 1.12
PCBP4-216ENST00000497390 PLEKHH2Q8IVE3 1493 aa22.07■■□□□ 1.12
PCBP4-216ENST00000497390 RNF123Q5XPI4 1314 aa22.07■■□□□ 1.12
PCBP4-216ENST00000497390 MYBBP1AQ9BQG0 1328 aaKnown RBP22.06■■□□□ 1.12
PCBP4-216ENST00000497390 LRPPRCP42704 1394 aaKnown RBP22.06■■□□□ 1.12
PCBP4-216ENST00000497390 A2MP01023 1474 aa22.06■■□□□ 1.12
PCBP4-216ENST00000497390 DISP3Q9P2K9 1392 aa22.04■■□□□ 1.12
PCBP4-216ENST00000497390 CC2D1BQ5T0F9 858 aaKnown RBP22.02■■□□□ 1.12
PCBP4-216ENST00000497390 PER1O15534 1290 aaPredicted RBP22.01■■□□□ 1.11
PCBP4-216ENST00000497390 CCDC136Q96JN2 1154 aa22.01■■□□□ 1.11
PCBP4-216ENST00000497390 MYO5CQ9NQX4 1742 aa22.01■■□□□ 1.11
PCBP4-216ENST00000497390 BRD4O60885 1362 aaPredicted RBP22■■□□□ 1.11
PCBP4-216ENST00000497390 TESK2Q96S53 571 aa22■■□□□ 1.11
PCBP4-216ENST00000497390 UNC13BO14795 1591 aa21.99■■□□□ 1.11
PCBP4-216ENST00000497390 RALBP1Q15311 655 aa21.99■■□□□ 1.11
PCBP4-216ENST00000497390 CDCA7LQ96GN5 454 aa21.98■■□□□ 1.11
PCBP4-216ENST00000497390 PARD3Q8TEW0 1356 aa21.97■■□□□ 1.11
PCBP4-216ENST00000497390 RSPH4AQ5TD94 716 aa21.95■■□□□ 1.1
PCBP4-216ENST00000497390 PANK3Q9H999 370 aa21.94■■□□□ 1.1
PCBP4-216ENST00000497390 KTN1Q86UP2 1357 aaKnown RBP21.94■■□□□ 1.1
PCBP4-216ENST00000497390 NLRP13Q86W25 1043 aa21.93■■□□□ 1.1
PCBP4-216ENST00000497390 EXOC6Q8TAG9 804 aa21.93■■□□□ 1.1
PCBP4-216ENST00000497390 IQGAP3Q86VI3 1631 aa21.93■■□□□ 1.1
PCBP4-216ENST00000497390 ERICH6Q7L0X2 663 aa21.92■■□□□ 1.1
PCBP4-216ENST00000497390 COL17A1Q9UMD9 1497 aaPredicted RBP21.92■■□□□ 1.1
PCBP4-216ENST00000497390 MAST1Q9Y2H9 1570 aa21.92■■□□□ 1.1
PCBP4-216ENST00000497390 GPRASP1Q5JY77 1395 aa21.92■■□□□ 1.1
PCBP4-216ENST00000497390 PRDM15P57071 1507 aaPredicted RBP21.91■■□□□ 1.1
PCBP4-216ENST00000497390 SHROOM2Q13796 1616 aa21.91■■□□□ 1.1
PCBP4-216ENST00000497390 PAK3O75914 559 aaPredicted RBP21.91■■□□□ 1.1
PCBP4-216ENST00000497390 RRP1P56182 461 aaKnown RBP21.9■■□□□ 1.1
PCBP4-216ENST00000497390 ABCC2Q92887 1545 aa21.9■■□□□ 1.1
PCBP4-216ENST00000497390 TRAPPC8Q9Y2L5 1435 aa21.89■■□□□ 1.1
PCBP4-216ENST00000497390 PLXNC1O60486 1568 aa21.89■■□□□ 1.09
PCBP4-216ENST00000497390 ERBINQ96RT1 1412 aa21.88■■□□□ 1.09
PCBP4-216ENST00000497390 PLIN1O60240 522 aa21.87■■□□□ 1.09
PCBP4-216ENST00000497390 RCAN3Q9UKA8 241 aa21.87■■□□□ 1.09
PCBP4-216ENST00000497390 AFAP1Q8N556 730 aa21.86■■□□□ 1.09
PCBP4-216ENST00000497390 SKAP1Q86WV1 359 aa21.85■■□□□ 1.09
PCBP4-216ENST00000497390 DUOX2Q9NRD8 1548 aa21.84■■□□□ 1.09
PCBP4-216ENST00000497390 ZCCHC11Q5TAX3 1644 aaKnown RBP21.83■■□□□ 1.08
PCBP4-216ENST00000497390 MAGI2Q86UL8 1455 aa21.82■■□□□ 1.08
PCBP4-216ENST00000497390 PLCH2O75038 1416 aa21.81■■□□□ 1.08
PCBP4-216ENST00000497390 TMF1P82094 1093 aa21.8■■□□□ 1.08
PCBP4-216ENST00000497390 LAMC1P11047 1609 aa21.79■■□□□ 1.08
PCBP4-216ENST00000497390 EFCAB2Q5VUJ9 269 aa21.78■■□□□ 1.08
PCBP4-216ENST00000497390 ATP10AO60312 1499 aa21.78■■□□□ 1.08
PCBP4-216ENST00000497390 ABCC1P33527 1531 aa21.78■■□□□ 1.08
PCBP4-216ENST00000497390 ADAMTS8Q9UP79 889 aa21.77■■□□□ 1.08
PCBP4-216ENST00000497390 RNF17Q9BXT8 1623 aaKnown RBP21.77■■□□□ 1.07
PCBP4-216ENST00000497390 EIF2AK4Q9P2K8 1649 aaKnown RBP21.77■■□□□ 1.07
PCBP4-216ENST00000497390 BCL11AQ9H165 835 aa21.76■■□□□ 1.07
PCBP4-216ENST00000497390 NOP58Q9Y2X3 529 aaKnown RBP21.76■■□□□ 1.07
PCBP4-216ENST00000497390 WDR7Q9Y4E6 1490 aa21.76■■□□□ 1.07
PCBP4-216ENST00000497390 NBR1Q14596 966 aa21.75■■□□□ 1.07
PCBP4-216ENST00000497390 MADDQ8WXG6 1647 aa21.74■■□□□ 1.07
PCBP4-216ENST00000497390 BLMP54132 1417 aaPredicted RBP21.74■■□□□ 1.07
PCBP4-216ENST00000497390 C20orf194Q5TEA3 1177 aa21.73■■□□□ 1.07
PCBP4-216ENST00000497390 SPAG9O60271 1321 aaKnown RBP21.73■■□□□ 1.07
PCBP4-216ENST00000497390 CLTCL1P53675 1640 aa21.71■■□□□ 1.07
PCBP4-216ENST00000497390 NPM2Q86SE8 214 aaKnown RBP21.7■■□□□ 1.06
PCBP4-216ENST00000497390 PPP2R1AP30153 589 aa21.69■■□□□ 1.06
PCBP4-216ENST00000497390 PDE3BQ13370 1112 aa21.69■■□□□ 1.06
PCBP4-216ENST00000497390 CRBNQ96SW2 442 aa21.69■■□□□ 1.06
PCBP4-216ENST00000497390 IQGAP1P46940 1657 aa21.69■■□□□ 1.06
PCBP4-216ENST00000497390 PLEKHH1Q9ULM0 1364 aa21.69■■□□□ 1.06
PCBP4-216ENST00000497390 WASHC2CQ9Y4E1 1318 aa21.68■■□□□ 1.06
PCBP4-216ENST00000497390 AMER1Q5JTC6 1135 aaPredicted RBP21.68■■□□□ 1.06
PCBP4-216ENST00000497390 UGGT1Q9NYU2 1555 aa21.68■■□□□ 1.06
PCBP4-216ENST00000497390 ZFYVE16Q7Z3T8 1539 aa21.68■■□□□ 1.06
PCBP4-216ENST00000497390 KNSTRNQ9Y448 316 aa21.67■■□□□ 1.06
PCBP4-216ENST00000497390 IPO9Q96P70 1041 aaKnown RBP21.66■■□□□ 1.06
PCBP4-216ENST00000497390 SPHKAPQ2M3C7 1700 aa21.66■■□□□ 1.06
PCBP4-216ENST00000497390 MYT1LQ9UL68 1186 aa21.65■■□□□ 1.06
PCBP4-216ENST00000497390 ANP32AP39687 249 aaKnown RBP21.65■■□□□ 1.06
PCBP4-216ENST00000497390 CEP152O94986 1710 aa21.65■■□□□ 1.06
PCBP4-216ENST00000497390 TRPM2O94759 1503 aa21.65■■□□□ 1.06
PCBP4-216ENST00000497390 KIF3BO15066 747 aa21.64■■□□□ 1.05
PCBP4-216ENST00000497390 ZMYM4Q5VZL5 1548 aa21.64■■□□□ 1.05
PCBP4-216ENST00000497390 CLASP1Q7Z460 1538 aa21.64■■□□□ 1.05
PCBP4-216ENST00000497390 CCDC146Q8IYE0 955 aa21.64■■□□□ 1.05
PCBP4-216ENST00000497390 CFAP70Q5T0N1 1121 aa21.63■■□□□ 1.05
PCBP4-216ENST00000497390 MYOM1P52179 1685 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms