RNA–Protein interactions for RNA: ENST00000494183.5

COL25A1-204, Transcript of collagen type XXV alpha 1 chain, humanhuman

TSL 5

Gene COL25A1, Length 4,630 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-204ENST00000494183 CGNL1Q0VF96 1302 aa14.78□□□□□ -0.04
COL25A1-204ENST00000494183 PTMAP06454 111 aaKnown RBP14.78□□□□□ -0.04
COL25A1-204ENST00000494183 ERICH6BQ5W0A0 696 aa14.78□□□□□ -0.04
COL25A1-204ENST00000494183 LMOD3Q0VAK6 560 aa14.77□□□□□ -0.04
COL25A1-204ENST00000494183 CENPJQ9HC77 1338 aaPredicted RBP14.77□□□□□ -0.04
COL25A1-204ENST00000494183 TULP1O00294 542 aaPredicted RBP14.77□□□□□ -0.05
COL25A1-204ENST00000494183 PLCB2Q00722 1185 aa14.77□□□□□ -0.05
COL25A1-204ENST00000494183 MCCP23508 829 aa14.76□□□□□ -0.05
COL25A1-204ENST00000494183 KIF21BO75037 1637 aa14.76□□□□□ -0.05
COL25A1-204ENST00000494183 ANKRD50Q9ULJ7 1429 aa14.76□□□□□ -0.05
COL25A1-204ENST00000494183 BCL2L13Q9BXK5 485 aa14.75□□□□□ -0.05
COL25A1-204ENST00000494183 KIAA1211Q6ZU35 1233 aa14.75□□□□□ -0.05
COL25A1-204ENST00000494183 CHMP3Q9Y3E7 222 aa14.75□□□□□ -0.05
COL25A1-204ENST00000494183 LRRC9Q6ZRR7 1453 aa14.75□□□□□ -0.05
COL25A1-204ENST00000494183 RBM19Q9Y4C8 960 aaKnown RBP14.74□□□□□ -0.05
COL25A1-204ENST00000494183 APAF1O14727 1248 aa14.73□□□□□ -0.05
COL25A1-204ENST00000494183 PRG4Q92954 1404 aaPredicted RBP14.73□□□□□ -0.05
COL25A1-204ENST00000494183 GOLGA6L4A6NEF3 574 aa14.72□□□□□ -0.05
COL25A1-204ENST00000494183 CASKIN1Q8WXD9 1431 aa14.72□□□□□ -0.05
COL25A1-204ENST00000494183 TMEM132EQ6IEE7 984 aa14.72□□□□□ -0.05
COL25A1-204ENST00000494183 PMFBP1Q8TBY8 1022 aa14.72□□□□□ -0.05
COL25A1-204ENST00000494183 CFAP44Q96MT7 982 aa14.72□□□□□ -0.05
COL25A1-204ENST00000494183 ARAP1Q96P48 1450 aa14.71□□□□□ -0.05
COL25A1-204ENST00000494183 NCOA2Q15596 1464 aa14.71□□□□□ -0.05
COL25A1-204ENST00000494183 HMMRO75330 724 aa14.71□□□□□ -0.06
COL25A1-204ENST00000494183 GORABQ5T7V8 394 aa14.71□□□□□ -0.06
COL25A1-204ENST00000494183 TCERG1O14776 1098 aaKnown RBP14.7□□□□□ -0.06
COL25A1-204ENST00000494183 HDAC5Q9UQL6 1122 aa14.7□□□□□ -0.06
COL25A1-204ENST00000494183 TAF7LQ5H9L4 462 aa14.69□□□□□ -0.06
COL25A1-204ENST00000494183 PLIN1O60240 522 aa14.69□□□□□ -0.06
COL25A1-204ENST00000494183 DNAJC5BQ9UF47 199 aa14.69□□□□□ -0.06
COL25A1-204ENST00000494183 ISY1Q9ULR0 285 aaKnown RBP14.69□□□□□ -0.06
COL25A1-204ENST00000494183 PRDM2Q13029 1718 aa14.68□□□□□ -0.06
COL25A1-204ENST00000494183 TEFQ10587 303 aa14.68□□□□□ -0.06
COL25A1-204ENST00000494183 STAC3Q96MF2 364 aa14.68□□□□□ -0.06
COL25A1-204ENST00000494183 SYNJ1O43426 1573 aa14.68□□□□□ -0.06
COL25A1-204ENST00000494183 TRIM6-TRIM34B2RNG4 842 aa14.68□□□□□ -0.06
COL25A1-204ENST00000494183 PSME1Q06323 249 aa14.68□□□□□ -0.06
COL25A1-204ENST00000494183 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.67□□□□□ -0.06
COL25A1-204ENST00000494183 CFAP70Q5T0N1 1121 aa14.67□□□□□ -0.06
COL25A1-204ENST00000494183 DIAPH1O60610 1272 aaKnown RBP14.67□□□□□ -0.06
COL25A1-204ENST00000494183 DNTTIP2Q5QJE6 756 aaKnown RBP14.66□□□□□ -0.06
COL25A1-204ENST00000494183 SLKQ9H2G2 1235 aaPredicted RBP14.66□□□□□ -0.06
COL25A1-204ENST00000494183 KIF7Q2M1P5 1343 aa14.66□□□□□ -0.06
COL25A1-204ENST00000494183 CUX1P39880 1505 aa14.66□□□□□ -0.06
COL25A1-204ENST00000494183 MFAP1P55081 439 aaKnown RBP14.66□□□□□ -0.06
COL25A1-204ENST00000494183 EVA1CP58658 441 aa14.66□□□□□ -0.06
COL25A1-204ENST00000494183 TOPBP1Q92547 1522 aa14.66□□□□□ -0.06
COL25A1-204ENST00000494183 POLA1P09884 1462 aaPredicted RBP14.66□□□□□ -0.06
COL25A1-204ENST00000494183 FYCO1Q9BQS8 1478 aa14.66□□□□□ -0.06
COL25A1-204ENST00000494183 GTF2E1P29083 439 aaPredicted RBP14.65□□□□□ -0.06
COL25A1-204ENST00000494183 SYNJ2O15056 1496 aa14.65□□□□□ -0.06
COL25A1-204ENST00000494183 C1orf141Q5JVX7 400 aa14.65□□□□□ -0.06
COL25A1-204ENST00000494183 E9PSI1 815 aa14.65□□□□□ -0.06
COL25A1-204ENST00000494183 MRC2Q9UBG0 1479 aa14.65□□□□□ -0.06
COL25A1-204ENST00000494183 GGNBP2Q9H3C7 697 aa14.65□□□□□ -0.06
COL25A1-204ENST00000494183 CC2D2AQ9P2K1 1620 aa14.65□□□□□ -0.06
COL25A1-204ENST00000494183 CABP2Q9NPB3 220 aa14.64□□□□□ -0.07
COL25A1-204ENST00000494183 PRXQ9BXM0 1461 aa14.62□□□□□ -0.07
COL25A1-204ENST00000494183 RIPK4P57078 832 aa14.62□□□□□ -0.07
COL25A1-204ENST00000494183 ARHGAP5Q13017 1502 aa14.62□□□□□ -0.07
COL25A1-204ENST00000494183 COG6Q9Y2V7 657 aa14.62□□□□□ -0.07
COL25A1-204ENST00000494183 IFT140Q96RY7 1462 aa14.62□□□□□ -0.07
COL25A1-204ENST00000494183 ZBED9Q6R2W3 1325 aa14.61□□□□□ -0.07
COL25A1-204ENST00000494183 EIF2S2P20042 333 aaKnown RBP14.61□□□□□ -0.07
COL25A1-204ENST00000494183 ZKSCAN2Q63HK3 967 aa14.61□□□□□ -0.07
COL25A1-204ENST00000494183 CCDC7Q96M83 1385 aa14.61□□□□□ -0.07
COL25A1-204ENST00000494183 NGEFQ8N5V2 710 aa14.61□□□□□ -0.07
COL25A1-204ENST00000494183 RAPGEF3O95398 923 aa14.61□□□□□ -0.07
COL25A1-204ENST00000494183 GPATCH3Q96I76 525 aa14.61□□□□□ -0.07
COL25A1-204ENST00000494183 ERICH3Q5RHP9 1530 aa14.61□□□□□ -0.07
COL25A1-204ENST00000494183 NBPF1Q3BBV0 1214 aa14.6□□□□□ -0.07
COL25A1-204ENST00000494183 GNL2Q13823 731 aaKnown RBP14.6□□□□□ -0.07
COL25A1-204ENST00000494183 NUTM2GQ5VZR2 741 aa14.6□□□□□ -0.07
COL25A1-204ENST00000494183 EXOC6Q8TAG9 804 aa14.6□□□□□ -0.07
COL25A1-204ENST00000494183 SCAPERQ9BY12 1400 aa14.59□□□□□ -0.07
COL25A1-204ENST00000494183 NECTIN2Q92692 538 aa14.59□□□□□ -0.07
COL25A1-204ENST00000494183 TMX4Q9H1E5 349 aaPredicted RBP14.59□□□□□ -0.07
COL25A1-204ENST00000494183 HMOX1P09601 288 aa14.59□□□□□ -0.07
COL25A1-204ENST00000494183 TXNDC2Q86VQ3 553 aa14.59□□□□□ -0.07
COL25A1-204ENST00000494183 FRAT2O75474 233 aaPredicted RBP14.57□□□□□ -0.08
COL25A1-204ENST00000494183 NLRP6P59044 892 aa14.57□□□□□ -0.08
COL25A1-204ENST00000494183 TTC5Q8N0Z6 440 aa14.57□□□□□ -0.08
COL25A1-204ENST00000494183 ATF3P18847 181 aa14.57□□□□□ -0.08
COL25A1-204ENST00000494183 RRP1P56182 461 aaKnown RBP14.57□□□□□ -0.08
COL25A1-204ENST00000494183 ANKRD45Q5TZF3 282 aa14.57□□□□□ -0.08
COL25A1-204ENST00000494183 HMGXB3Q12766 1538 aa14.57□□□□□ -0.08
COL25A1-204ENST00000494183 SNAPC4Q5SXM2 1469 aa14.56□□□□□ -0.08
COL25A1-204ENST00000494183 CRBNQ96SW2 442 aa14.56□□□□□ -0.08
COL25A1-204ENST00000494183 WASHC2AQ641Q2 1341 aa14.56□□□□□ -0.08
COL25A1-204ENST00000494183 SYTL4Q96C24 671 aaPredicted RBP14.56□□□□□ -0.08
COL25A1-204ENST00000494183 MTHFSP49914 203 aa14.55□□□□□ -0.08
COL25A1-204ENST00000494183 NOL8Q76FK4 1167 aaKnown RBP14.55□□□□□ -0.08
COL25A1-204ENST00000494183 RUNDC1Q96C34 613 aa14.55□□□□□ -0.08
COL25A1-204ENST00000494183 TROQ12816 1431 aaPredicted RBP14.55□□□□□ -0.08
COL25A1-204ENST00000494183 RTN4Q9NQC3 1192 aaKnown RBP14.54□□□□□ -0.08
COL25A1-204ENST00000494183 NEXNQ0ZGT2 675 aa14.54□□□□□ -0.08
COL25A1-204ENST00000494183 GBP4Q96PP9 640 aa14.53□□□□□ -0.08
COL25A1-204ENST00000494183 GZF1Q9H116 711 aaPredicted RBP14.53□□□□□ -0.08
COL25A1-204ENST00000494183 TSHZ2Q9NRE2 1034 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms