RNA–Protein interactions for RNA: ENST00000494183.5

COL25A1-204, Transcript of collagen type XXV alpha 1 chain, humanhuman

TSL 5

Gene COL25A1, Length 4,630 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-204ENST00000494183 DCAF8L2P0C7V8 631 aa20.95■□□□□ 0.94
COL25A1-204ENST00000494183 NISCHQ9Y2I1 1504 aa20.23■□□□□ 0.83
COL25A1-204ENST00000494183 SUPT5HO00267 1087 aaKnown RBP19.75■□□□□ 0.75
COL25A1-204ENST00000494183 SHROOM4Q9ULL8 1493 aa19.5■□□□□ 0.71
COL25A1-204ENST00000494183 EHMT2Q96KQ7 1210 aa19.04■□□□□ 0.64
COL25A1-204ENST00000494183 FAM9AQ8IZU1 332 aaPredicted RBP18.61■□□□□ 0.57
COL25A1-204ENST00000494183 APLP2Q06481 763 aa18.49■□□□□ 0.55
COL25A1-204ENST00000494183 TTBK1Q5TCY1 1321 aaPredicted RBP18.32■□□□□ 0.52
COL25A1-204ENST00000494183 TRIM41Q8WV44 630 aa18.26■□□□□ 0.51
COL25A1-204ENST00000494183 RANGAP1P46060 587 aaPredicted RBP18.26■□□□□ 0.51
COL25A1-204ENST00000494183 PCGF6Q9BYE7 350 aa18.15■□□□□ 0.5
COL25A1-204ENST00000494183 ATP1B4Q9UN42 357 aaPredicted RBP18.03■□□□□ 0.48
COL25A1-204ENST00000494183 UBTFP17480 764 aaKnown RBP18.03■□□□□ 0.48
COL25A1-204ENST00000494183 CCER1Q8TC90 406 aaPredicted RBP17.79■□□□□ 0.44
COL25A1-204ENST00000494183 PPARGC1BQ86YN6 1023 aaKnown RBP17.73■□□□□ 0.43
COL25A1-204ENST00000494183 PELP1Q8IZL8 1130 aaKnown RBP17.72■□□□□ 0.43
COL25A1-204ENST00000494183 ZEB1P37275 1124 aaPredicted RBP17.61■□□□□ 0.41
COL25A1-204ENST00000494183 ABCC9O60706 1549 aa17.6■□□□□ 0.41
COL25A1-204ENST00000494183 CHIC1Q5VXU3 224 aa17.55■□□□□ 0.4
COL25A1-204ENST00000494183 LOC105371045A0A1W2PR82 267 aa17.55■□□□□ 0.4
COL25A1-204ENST00000494183 PABPN1Q86U42 306 aaKnown RBP eCLIP17.55■□□□□ 0.4
COL25A1-204ENST00000494183 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.46■□□□□ 0.39
COL25A1-204ENST00000494183 HNRNPUL2Q1KMD3 747 aaKnown RBP17.46■□□□□ 0.39
COL25A1-204ENST00000494183 ITGAEP38570 1179 aa17.42■□□□□ 0.38
COL25A1-204ENST00000494183 CENPBP07199 599 aaPredicted RBP17.4■□□□□ 0.38
COL25A1-204ENST00000494183 TRIM26Q12899 539 aaPredicted RBP17.39■□□□□ 0.37
COL25A1-204ENST00000494183 MYT1LQ9UL68 1186 aa17.31■□□□□ 0.36
COL25A1-204ENST00000494183 YTHDC1Q96MU7 727 aaKnown RBP17.24■□□□□ 0.35
COL25A1-204ENST00000494183 POLR3GLQ9BT43 218 aa17.1■□□□□ 0.33
COL25A1-204ENST00000494183 NEFLP07196 543 aa17.07■□□□□ 0.32
COL25A1-204ENST00000494183 HRCP23327 699 aa17.06■□□□□ 0.32
COL25A1-204ENST00000494183 CNGB1Q14028 1251 aaPredicted RBP16.99■□□□□ 0.31
COL25A1-204ENST00000494183 ERICH6Q7L0X2 663 aa16.98■□□□□ 0.31
COL25A1-204ENST00000494183 FAM50AQ14320 339 aaKnown RBP16.97■□□□□ 0.31
COL25A1-204ENST00000494183 FBLN2P98095 1184 aa16.97■□□□□ 0.31
COL25A1-204ENST00000494183 TRIM52Q96A61 297 aa16.83■□□□□ 0.29
COL25A1-204ENST00000494183 CSRNP3Q8WYN3 585 aa16.81■□□□□ 0.28
COL25A1-204ENST00000494183 P3H3Q8IVL6 736 aa16.8■□□□□ 0.28
COL25A1-204ENST00000494183 SLC4A1APQ9BWU0 796 aaKnown RBP16.77■□□□□ 0.28
COL25A1-204ENST00000494183 SCRIBQ14160 1630 aa16.77■□□□□ 0.28
COL25A1-204ENST00000494183 NEUROD1Q13562 356 aa16.76■□□□□ 0.27
COL25A1-204ENST00000494183 ARID3CA6NKF2 412 aa16.74■□□□□ 0.27
COL25A1-204ENST00000494183 ZCCHC6Q5VYS8 1495 aaKnown RBP16.69■□□□□ 0.26
COL25A1-204ENST00000494183 DIEXFQ68CQ4 756 aaKnown RBP16.67■□□□□ 0.26
COL25A1-204ENST00000494183 ZNF326Q5BKZ1 582 aaKnown RBP16.64■□□□□ 0.25
COL25A1-204ENST00000494183 ZNF777Q9ULD5 760 aaPredicted RBP16.55■□□□□ 0.24
COL25A1-204ENST00000494183 CDK11AQ9UQ88 783 aaPredicted RBP16.49■□□□□ 0.23
COL25A1-204ENST00000494183 DAXXQ9UER7 740 aaPredicted RBP16.47■□□□□ 0.23
COL25A1-204ENST00000494183 CCDC180Q9P1Z9 1646 aa16.42■□□□□ 0.22
COL25A1-204ENST00000494183 ANP32CO43423 234 aa16.39■□□□□ 0.21
COL25A1-204ENST00000494183 ZNF316A6NFI3 1004 aaPredicted RBP16.35■□□□□ 0.21
COL25A1-204ENST00000494183 BCANQ96GW7 911 aa16.35■□□□□ 0.21
COL25A1-204ENST00000494183 CLSPNQ9HAW4 1339 aa16.34■□□□□ 0.21
COL25A1-204ENST00000494183 NPM1P06748 294 aaKnown RBP eCLIP16.31■□□□□ 0.2
COL25A1-204ENST00000494183 RB1CC1Q8TDY2 1594 aa16.28■□□□□ 0.2
COL25A1-204ENST00000494183 CHMP7Q8WUX9 453 aaPredicted RBP16.27■□□□□ 0.2
COL25A1-204ENST00000494183 CHIC2Q9UKJ5 165 aa16.26■□□□□ 0.19
COL25A1-204ENST00000494183 RSF1Q96T23 1441 aaPredicted RBP16.25■□□□□ 0.19
COL25A1-204ENST00000494183 ESF1Q9H501 851 aaKnown RBP16.24■□□□□ 0.19
COL25A1-204ENST00000494183 CHGAP10645 457 aaKnown RBP16.23■□□□□ 0.19
COL25A1-204ENST00000494183 PLPPR3Q6T4P5 718 aa16.17■□□□□ 0.18
COL25A1-204ENST00000494183 TONSLQ96HA7 1378 aa16.17■□□□□ 0.18
COL25A1-204ENST00000494183 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.17■□□□□ 0.18
COL25A1-204ENST00000494183 GTF3C3Q9Y5Q9 886 aa16.17■□□□□ 0.18
COL25A1-204ENST00000494183 SLC24A1O60721 1099 aa16.16■□□□□ 0.18
COL25A1-204ENST00000494183 TSPY4P0CV99 314 aa16.15■□□□□ 0.18
COL25A1-204ENST00000494183 TSPY10P0CW01 314 aa16.15■□□□□ 0.18
COL25A1-204ENST00000494183 STAG3Q9UJ98 1225 aa16.15■□□□□ 0.18
COL25A1-204ENST00000494183 MTUS2Q5JR59 1369 aa16.15■□□□□ 0.18
COL25A1-204ENST00000494183 NACADO15069 1562 aa16.13■□□□□ 0.17
COL25A1-204ENST00000494183 CLIP1P30622 1438 aa16.12■□□□□ 0.17
COL25A1-204ENST00000494183 NEFMP07197 916 aa16.12■□□□□ 0.17
COL25A1-204ENST00000494183 BCL11AQ9H165 835 aa16.09■□□□□ 0.17
COL25A1-204ENST00000494183 DCAF1Q9Y4B6 1507 aa16.09■□□□□ 0.17
COL25A1-204ENST00000494183 BAZ1BQ9UIG0 1483 aaKnown RBP16.08■□□□□ 0.16
COL25A1-204ENST00000494183 DDX10Q13206 875 aaKnown RBP16.07■□□□□ 0.16
COL25A1-204ENST00000494183 WRNQ14191 1432 aaPredicted RBP eCLIP16.06■□□□□ 0.16
COL25A1-204ENST00000494183 KCNH8Q96L42 1107 aa16.06■□□□□ 0.16
COL25A1-204ENST00000494183 CANXP27824 592 aaKnown RBP16.06■□□□□ 0.16
COL25A1-204ENST00000494183 ZBTB47Q9UFB7 747 aaPredicted RBP16.05■□□□□ 0.16
COL25A1-204ENST00000494183 KDM2AQ9Y2K7 1162 aa16.03■□□□□ 0.16
COL25A1-204ENST00000494183 RRP7BPQ9NSQ0 103 aa16.01■□□□□ 0.15
COL25A1-204ENST00000494183 PLEKHD1A6NEE1 506 aa16■□□□□ 0.15
COL25A1-204ENST00000494183 CECR2Q9BXF3 1484 aa16■□□□□ 0.15
COL25A1-204ENST00000494183 MYT1Q01538 1121 aa15.99■□□□□ 0.15
COL25A1-204ENST00000494183 RTL5Q5HYW3 569 aaPredicted RBP15.99■□□□□ 0.15
COL25A1-204ENST00000494183 EEA1Q15075 1411 aa15.98■□□□□ 0.15
COL25A1-204ENST00000494183 CEP162Q5TB80 1403 aa15.95■□□□□ 0.14
COL25A1-204ENST00000494183 FAM9BQ8IZU0 186 aa15.95■□□□□ 0.14
COL25A1-204ENST00000494183 KIF27Q86VH2 1401 aa15.95■□□□□ 0.14
COL25A1-204ENST00000494183 HIRIP3Q9BW71 556 aaPredicted RBP15.95■□□□□ 0.14
COL25A1-204ENST00000494183 GOLGA3Q08378 1498 aa15.94■□□□□ 0.14
COL25A1-204ENST00000494183 SALL2Q9Y467 1007 aaPredicted RBP15.94■□□□□ 0.14
COL25A1-204ENST00000494183 MYO15BQ96JP2 1530 aa15.94■□□□□ 0.14
COL25A1-204ENST00000494183 ACIN1Q9UKV3 1341 aaKnown RBP15.93■□□□□ 0.14
COL25A1-204ENST00000494183 HNRNPUQ00839 825 aaKnown RBP eCLIP15.93■□□□□ 0.14
COL25A1-204ENST00000494183 SENP3Q9H4L4 574 aaPredicted RBP15.9■□□□□ 0.14
COL25A1-204ENST00000494183 BAZ1AQ9NRL2 1556 aaPredicted RBP15.9■□□□□ 0.14
COL25A1-204ENST00000494183 CFDP1Q9UEE9 299 aaPredicted RBP15.88■□□□□ 0.13
COL25A1-204ENST00000494183 TMC1Q8TDI8 760 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms