RNA–Protein interactions for RNA: ENST00000487701.1

SEC22C-215, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22C, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-215ENST00000487701 TOP2BQ02880 1626 aa11.31□□□□□ -0.6
SEC22C-215ENST00000487701 SLC34A2O95436 690 aa11.31□□□□□ -0.6
SEC22C-215ENST00000487701 ZNF687Q8N1G0 1237 aa11.31□□□□□ -0.6
SEC22C-215ENST00000487701 KHSRPQ92945 711 aaKnown RBP eCLIP11.31□□□□□ -0.6
SEC22C-215ENST00000487701 PCDHGA4Q9Y5G9 962 aa11.31□□□□□ -0.6
SEC22C-215ENST00000487701 WRNQ14191 1432 aaPredicted RBP eCLIP11.28□□□□□ -0.6
SEC22C-215ENST00000487701 NUDT7P0C024 238 aa11.28□□□□□ -0.6
SEC22C-215ENST00000487701 UPF1Q92900 1129 aaKnown RBP eCLIP11.28□□□□□ -0.6
SEC22C-215ENST00000487701 SOGA1O94964 1423 aa11.27□□□□□ -0.6
SEC22C-215ENST00000487701 MFSD10Q14728 455 aa11.27□□□□□ -0.61
SEC22C-215ENST00000487701 ZNF316A6NFI3 1004 aaPredicted RBP11.26□□□□□ -0.61
SEC22C-215ENST00000487701 PTCD2Q8WV60 388 aaKnown RBP11.26□□□□□ -0.61
SEC22C-215ENST00000487701 PBRM1Q86U86 1689 aa11.26□□□□□ -0.61
SEC22C-215ENST00000487701 AQRO60306 1485 aaKnown RBP eCLIP11.25□□□□□ -0.61
SEC22C-215ENST00000487701 ABCA5Q8WWZ7 1642 aa11.24□□□□□ -0.61
SEC22C-215ENST00000487701 CHD1O14646 1710 aa11.24□□□□□ -0.61
SEC22C-215ENST00000487701 TBC1D12O60347 775 aa11.24□□□□□ -0.61
SEC22C-215ENST00000487701 ABCA10Q8WWZ4 1543 aa11.23□□□□□ -0.61
SEC22C-215ENST00000487701 TDRD9Q8NDG6 1382 aaKnown RBP11.22□□□□□ -0.61
SEC22C-215ENST00000487701 OXER1Q8TDS5 423 aa11.21□□□□□ -0.61
SEC22C-215ENST00000487701 PLCB2Q00722 1185 aa11.2□□□□□ -0.62
SEC22C-215ENST00000487701 TSHZ2Q9NRE2 1034 aa11.2□□□□□ -0.62
SEC22C-215ENST00000487701 WDR70Q9NW82 654 aa11.19□□□□□ -0.62
SEC22C-215ENST00000487701 LHX6Q9UPM6 363 aa11.18□□□□□ -0.62
SEC22C-215ENST00000487701 GAPVD1Q14C86 1478 aa11.17□□□□□ -0.62
SEC22C-215ENST00000487701 SNAPC4Q5SXM2 1469 aa11.17□□□□□ -0.62
SEC22C-215ENST00000487701 MAP3K9P80192 1104 aa11.16□□□□□ -0.62
SEC22C-215ENST00000487701 EMILIN3Q9NT22 766 aa11.16□□□□□ -0.62
SEC22C-215ENST00000487701 GRIN2BQ13224 1484 aa11.16□□□□□ -0.62
SEC22C-215ENST00000487701 MAGI1Q96QZ7 1491 aaPredicted RBP11.14□□□□□ -0.63
SEC22C-215ENST00000487701 ADAMTS12P58397 1594 aa11.12□□□□□ -0.63
SEC22C-215ENST00000487701 KDM4FA0A1W2PPD8 638 aa11.12□□□□□ -0.63
SEC22C-215ENST00000487701 CAMK2BQ13554 666 aa11.12□□□□□ -0.63
SEC22C-215ENST00000487701 ANKRD13DQ6ZTN6 518 aa11.12□□□□□ -0.63
SEC22C-215ENST00000487701 RNF166Q96A37 237 aaPredicted RBP11.12□□□□□ -0.63
SEC22C-215ENST00000487701 MYT1LQ9UL68 1186 aa11.12□□□□□ -0.63
SEC22C-215ENST00000487701 PSDA5PKW4 1024 aaPredicted RBP11.1□□□□□ -0.63
SEC22C-215ENST00000487701 EVI5O60447 810 aa11.1□□□□□ -0.63
SEC22C-215ENST00000487701 PBX2P40425 430 aa11.1□□□□□ -0.63
SEC22C-215ENST00000487701 HAP1P54257 671 aaPredicted RBP11.1□□□□□ -0.63
SEC22C-215ENST00000487701 LSM11P83369 360 aaKnown RBP eCLIP11.1□□□□□ -0.63
SEC22C-215ENST00000487701 ERICH3Q5RHP9 1530 aa11.09□□□□□ -0.63
SEC22C-215ENST00000487701 SYNJ2O15056 1496 aa11.09□□□□□ -0.63
SEC22C-215ENST00000487701 DPYSL4O14531 572 aa11.09□□□□□ -0.63
SEC22C-215ENST00000487701 PTGER2P43116 358 aa11.09□□□□□ -0.63
SEC22C-215ENST00000487701 E2F4Q16254 413 aa11.09□□□□□ -0.63
SEC22C-215ENST00000487701 POTEEQ6S8J3 1075 aa11.09□□□□□ -0.63
SEC22C-215ENST00000487701 PPP4R3BQ5MIZ7 849 aa11.07□□□□□ -0.64
SEC22C-215ENST00000487701 CLASP1Q7Z460 1538 aa11.06□□□□□ -0.64
SEC22C-215ENST00000487701 ZNF454Q8N9F8 522 aa11.06□□□□□ -0.64
SEC22C-215ENST00000487701 AXIN2Q9Y2T1 843 aa11.05□□□□□ -0.64
SEC22C-215ENST00000487701 RIMBP3CA6NJZ7 1639 aa11.05□□□□□ -0.64
SEC22C-215ENST00000487701 RIMBP3BA6NNM3 1639 aa11.05□□□□□ -0.64
SEC22C-215ENST00000487701 RIMBP3Q9UFD9 1639 aa11.05□□□□□ -0.64
SEC22C-215ENST00000487701 GRIN2AQ12879 1464 aa11.04□□□□□ -0.64
SEC22C-215ENST00000487701 KIF27Q86VH2 1401 aa11.03□□□□□ -0.64
SEC22C-215ENST00000487701 CUL7Q14999 1698 aa11.03□□□□□ -0.64
SEC22C-215ENST00000487701 CEP170Q5SW79 1584 aa11.03□□□□□ -0.64
SEC22C-215ENST00000487701 FHAD1B1AJZ9 1412 aa11.02□□□□□ -0.64
SEC22C-215ENST00000487701 ANO8Q9HCE9 1232 aaPredicted RBP11.02□□□□□ -0.65
SEC22C-215ENST00000487701 ARHGEF11O15085 1522 aa11.01□□□□□ -0.65
SEC22C-215ENST00000487701 CHMP7Q8WUX9 453 aaPredicted RBP11.01□□□□□ -0.65
SEC22C-215ENST00000487701 ARHGAP33O14559 1287 aa11□□□□□ -0.65
SEC22C-215ENST00000487701 JPH4Q96JJ6 628 aa11□□□□□ -0.65
SEC22C-215ENST00000487701 RUSC2Q8N2Y8 1516 aa10.99□□□□□ -0.65
SEC22C-215ENST00000487701 FOSBP53539 338 aa10.99□□□□□ -0.65
SEC22C-215ENST00000487701 IGF1RP08069 1367 aa10.99□□□□□ -0.65
SEC22C-215ENST00000487701 NUP160Q12769 1436 aa10.99□□□□□ -0.65
SEC22C-215ENST00000487701 KCNH8Q96L42 1107 aa10.98□□□□□ -0.65
SEC22C-215ENST00000487701 PDIA6Q15084 440 aa10.97□□□□□ -0.65
SEC22C-215ENST00000487701 SHROOM2Q13796 1616 aa10.96□□□□□ -0.65
SEC22C-215ENST00000487701 ZDHHC16Q969W1 377 aa10.96□□□□□ -0.65
SEC22C-215ENST00000487701 KCNK17Q96T54 332 aa10.96□□□□□ -0.65
SEC22C-215ENST00000487701 KCNV2Q8TDN2 545 aa10.95□□□□□ -0.66
SEC22C-215ENST00000487701 DDX12PQ92771 950 aa10.95□□□□□ -0.66
SEC22C-215ENST00000487701 SPDYE16A6NNV3 312 aaPredicted RBP10.94□□□□□ -0.66
SEC22C-215ENST00000487701 PSEN2P49810 448 aa10.94□□□□□ -0.66
SEC22C-215ENST00000487701 ADGRD1Q6QNK2 874 aa10.94□□□□□ -0.66
SEC22C-215ENST00000487701 PCDHGA10Q9Y5H3 936 aa10.94□□□□□ -0.66
SEC22C-215ENST00000487701 PHF14O94880 888 aa10.93□□□□□ -0.66
SEC22C-215ENST00000487701 ARIH1Q9Y4X5 557 aaPredicted RBP10.93□□□□□ -0.66
SEC22C-215ENST00000487701 ERCC6L2Q5T890 1561 aa10.93□□□□□ -0.66
SEC22C-215ENST00000487701 ARAP1Q96P48 1450 aa10.93□□□□□ -0.66
SEC22C-215ENST00000487701 TK2O00142 265 aa10.92□□□□□ -0.66
SEC22C-215ENST00000487701 DMRTA1Q5VZB9 504 aa10.92□□□□□ -0.66
SEC22C-215ENST00000487701 TYW1BQ6NUM6 668 aa10.92□□□□□ -0.66
SEC22C-215ENST00000487701 P3H3Q8IVL6 736 aa10.92□□□□□ -0.66
SEC22C-215ENST00000487701 ADAM33Q9BZ11 813 aa10.92□□□□□ -0.66
SEC22C-215ENST00000487701 BCL2L12Q9HB09 334 aa10.92□□□□□ -0.66
SEC22C-215ENST00000487701 CARMIL1Q5VZK9 1371 aa10.91□□□□□ -0.66
SEC22C-215ENST00000487701 PTPREP23469 700 aa10.91□□□□□ -0.66
SEC22C-215ENST00000487701 FBXW7Q969H0 707 aa10.9□□□□□ -0.66
SEC22C-215ENST00000487701 NBR1Q14596 966 aa10.89□□□□□ -0.67
SEC22C-215ENST00000487701 ARHGEF1Q92888 912 aaKnown RBP10.89□□□□□ -0.67
SEC22C-215ENST00000487701 CTTNBP2Q8WZ74 1663 aa10.89□□□□□ -0.67
SEC22C-215ENST00000487701 GRXCR2A6NFK2 248 aa10.88□□□□□ -0.67
SEC22C-215ENST00000487701 HRO43593 1189 aa10.88□□□□□ -0.67
SEC22C-215ENST00000487701 RBM33Q96EV2 1170 aaKnown RBP10.88□□□□□ -0.67
SEC22C-215ENST00000487701 EPAS1Q99814 870 aa10.88□□□□□ -0.67
SEC22C-215ENST00000487701 RAPGEF2Q9Y4G8 1499 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms