RNA–Protein interactions for RNA: ENST00000484767.5

SND1-211, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-211ENST00000484767 NUP160Q12769 1436 aa12.45□□□□□ -0.42
SND1-211ENST00000484767 INSRP06213 1382 aa12.44□□□□□ -0.42
SND1-211ENST00000484767 KIF15Q9NS87 1388 aa12.44□□□□□ -0.42
SND1-211ENST00000484767 BRD4O60885 1362 aaPredicted RBP12.43□□□□□ -0.42
SND1-211ENST00000484767 ZNF644Q9H582 1327 aaPredicted RBP12.42□□□□□ -0.42
SND1-211ENST00000484767 IRX6P78412 446 aaPredicted RBP12.42□□□□□ -0.42
SND1-211ENST00000484767 MAST1Q9Y2H9 1570 aa12.42□□□□□ -0.42
SND1-211ENST00000484767 LRPPRCP42704 1394 aaKnown RBP12.42□□□□□ -0.42
SND1-211ENST00000484767 TRPM1Q7Z4N2 1603 aa12.41□□□□□ -0.42
SND1-211ENST00000484767 RALBP1Q15311 655 aa12.41□□□□□ -0.42
SND1-211ENST00000484767 C9orf84Q5VXU9 1444 aa12.41□□□□□ -0.42
SND1-211ENST00000484767 CYB5RLQ6IPT4 315 aa12.4□□□□□ -0.42
SND1-211ENST00000484767 BCL11AQ9H165 835 aa12.4□□□□□ -0.42
SND1-211ENST00000484767 PREX2Q70Z35 1606 aa12.4□□□□□ -0.42
SND1-211ENST00000484767 PLB1Q6P1J6 1458 aa12.4□□□□□ -0.43
SND1-211ENST00000484767 UNC13BO14795 1591 aa12.39□□□□□ -0.43
SND1-211ENST00000484767 PKD2Q13563 968 aa12.39□□□□□ -0.43
SND1-211ENST00000484767 EIF2AK4Q9P2K8 1649 aaKnown RBP12.39□□□□□ -0.43
SND1-211ENST00000484767 PNISRQ8TF01 805 aaKnown RBP12.38□□□□□ -0.43
SND1-211ENST00000484767 MYBBP1AQ9BQG0 1328 aaKnown RBP12.37□□□□□ -0.43
SND1-211ENST00000484767 PDE3BQ13370 1112 aa12.37□□□□□ -0.43
SND1-211ENST00000484767 RSPH4AQ5TD94 716 aa12.37□□□□□ -0.43
SND1-211ENST00000484767 B4GALNT3Q6L9W6 998 aa12.36□□□□□ -0.43
SND1-211ENST00000484767 WASHC2CQ9Y4E1 1318 aa12.36□□□□□ -0.43
SND1-211ENST00000484767 CCDC141Q6ZP82 1450 aa12.35□□□□□ -0.43
SND1-211ENST00000484767 NUP155O75694 1391 aa12.35□□□□□ -0.43
SND1-211ENST00000484767 CDC42BPBQ9Y5S2 1711 aa12.35□□□□□ -0.43
SND1-211ENST00000484767 PLEKHD1A6NEE1 506 aa12.35□□□□□ -0.43
SND1-211ENST00000484767 PLXNC1O60486 1568 aa12.35□□□□□ -0.43
SND1-211ENST00000484767 ATP10BO94823 1461 aa12.34□□□□□ -0.43
SND1-211ENST00000484767 IQGAP3Q86VI3 1631 aa12.34□□□□□ -0.43
SND1-211ENST00000484767 TMC1Q8TDI8 760 aa12.34□□□□□ -0.43
SND1-211ENST00000484767 PLEKHH2Q8IVE3 1493 aa12.34□□□□□ -0.43
SND1-211ENST00000484767 GPRASP1Q5JY77 1395 aa12.33□□□□□ -0.44
SND1-211ENST00000484767 FAM135AQ9P2D6 1515 aa12.33□□□□□ -0.44
SND1-211ENST00000484767 SLC4A2P04920 1241 aa12.33□□□□□ -0.44
SND1-211ENST00000484767 CCDC136Q96JN2 1154 aa12.33□□□□□ -0.44
SND1-211ENST00000484767 CARD11Q9BXL7 1154 aa12.33□□□□□ -0.44
SND1-211ENST00000484767 NOP58Q9Y2X3 529 aaKnown RBP12.33□□□□□ -0.44
SND1-211ENST00000484767 SAMD9LQ8IVG5 1584 aa12.33□□□□□ -0.44
SND1-211ENST00000484767 MYO5CQ9NQX4 1742 aa12.33□□□□□ -0.44
SND1-211ENST00000484767 PRDM15P57071 1507 aaPredicted RBP12.32□□□□□ -0.44
SND1-211ENST00000484767 ARID3CA6NKF2 412 aa12.32□□□□□ -0.44
SND1-211ENST00000484767 TSPY4P0CV99 314 aa12.32□□□□□ -0.44
SND1-211ENST00000484767 TSPY10P0CW01 314 aa12.32□□□□□ -0.44
SND1-211ENST00000484767 PARD3Q8TEW0 1356 aa12.31□□□□□ -0.44
SND1-211ENST00000484767 PRAG1Q86YV5 1406 aa12.31□□□□□ -0.44
SND1-211ENST00000484767 CHMP7Q8WUX9 453 aaPredicted RBP12.31□□□□□ -0.44
SND1-211ENST00000484767 ATP10AO60312 1499 aa12.31□□□□□ -0.44
SND1-211ENST00000484767 RNF17Q9BXT8 1623 aaKnown RBP12.3□□□□□ -0.44
SND1-211ENST00000484767 ANP32AP39687 249 aaKnown RBP12.3□□□□□ -0.44
SND1-211ENST00000484767 JPH4Q96JJ6 628 aa12.3□□□□□ -0.44
SND1-211ENST00000484767 COL17A1Q9UMD9 1497 aaPredicted RBP12.29□□□□□ -0.44
SND1-211ENST00000484767 NLRP13Q86W25 1043 aa12.29□□□□□ -0.44
SND1-211ENST00000484767 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.28□□□□□ -0.444e-7■□□□□ 8.7
SND1-211ENST00000484767 ZNF777Q9ULD5 760 aaPredicted RBP12.28□□□□□ -0.44
SND1-211ENST00000484767 MAGI2Q86UL8 1455 aa12.27□□□□□ -0.44
SND1-211ENST00000484767 TCERG1O14776 1098 aaKnown RBP12.27□□□□□ -0.45
SND1-211ENST00000484767 MS4A1P11836 297 aa12.27□□□□□ -0.45
SND1-211ENST00000484767 IPO9Q96P70 1041 aaKnown RBP12.27□□□□□ -0.45
SND1-211ENST00000484767 CCDC144AA2RUR9 1427 aa12.27□□□□□ -0.45
SND1-211ENST00000484767 BLMP54132 1417 aaPredicted RBP12.27□□□□□ -0.45
SND1-211ENST00000484767 RRP1P56182 461 aaKnown RBP12.26□□□□□ -0.45
SND1-211ENST00000484767 ZNF326Q5BKZ1 582 aaKnown RBP12.26□□□□□ -0.45
SND1-211ENST00000484767 RNF39Q9H2S5 420 aa12.26□□□□□ -0.45
SND1-211ENST00000484767 ST20-MTHFSA0A0A6YYL1 179 aa12.25□□□□□ -0.45
SND1-211ENST00000484767 DUOX2Q9NRD8 1548 aa12.25□□□□□ -0.45
SND1-211ENST00000484767 SHROOM2Q13796 1616 aa12.24□□□□□ -0.45
SND1-211ENST00000484767 A2MP01023 1474 aa12.23□□□□□ -0.45
SND1-211ENST00000484767 POLR3GLQ9BT43 218 aa12.23□□□□□ -0.45
SND1-211ENST00000484767 IQGAP1P46940 1657 aa12.22□□□□□ -0.45
SND1-211ENST00000484767 CLASP1Q7Z460 1538 aa12.22□□□□□ -0.45
SND1-211ENST00000484767 ERBINQ96RT1 1412 aa12.22□□□□□ -0.45
SND1-211ENST00000484767 DCAF11Q8TEB1 546 aa12.22□□□□□ -0.45
SND1-211ENST00000484767 RCAN3Q9UKA8 241 aa12.22□□□□□ -0.45
SND1-211ENST00000484767 KIAA1210Q9ULL0 1709 aa12.21□□□□□ -0.45
SND1-211ENST00000484767 STAC3Q96MF2 364 aa12.21□□□□□ -0.45
SND1-211ENST00000484767 ZBTB47Q9UFB7 747 aaPredicted RBP12.21□□□□□ -0.45
SND1-211ENST00000484767 NEURL4Q96JN8 1562 aa12.21□□□□□ -0.46
SND1-211ENST00000484767 SYCP2Q9BX26 1530 aa12.21□□□□□ -0.46
SND1-211ENST00000484767 CEP152O94986 1710 aa12.2□□□□□ -0.46
SND1-211ENST00000484767 SPHKAPQ2M3C7 1700 aa12.2□□□□□ -0.46
SND1-211ENST00000484767 PER1O15534 1290 aaPredicted RBP12.2□□□□□ -0.46
SND1-211ENST00000484767 PLA2R1Q13018 1463 aa12.2□□□□□ -0.46
SND1-211ENST00000484767 SYNMO15061 1565 aa12.19□□□□□ -0.46
SND1-211ENST00000484767 TTC37Q6PGP7 1564 aa12.19□□□□□ -0.46
SND1-211ENST00000484767 DEKP35659 375 aaKnown RBP12.19□□□□□ -0.46
SND1-211ENST00000484767 ARHGAP5Q13017 1502 aa12.19□□□□□ -0.46
SND1-211ENST00000484767 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.19□□□□□ -0.462e-6■■■■□ 24.9
SND1-211ENST00000484767 ILDR1Q86SU0 546 aaPredicted RBP12.18□□□□□ -0.46
SND1-211ENST00000484767 HNRNPMP52272 730 aaKnown RBP eCLIP12.17□□□□□ -0.461e-7■■■■□ 25.2
SND1-211ENST00000484767 USP35Q9P2H5 1018 aa12.17□□□□□ -0.46
SND1-211ENST00000484767 KDM2AQ9Y2K7 1162 aa12.17□□□□□ -0.46
SND1-211ENST00000484767 MADDQ8WXG6 1647 aa12.17□□□□□ -0.46
SND1-211ENST00000484767 ABCC2Q92887 1545 aa12.16□□□□□ -0.46
SND1-211ENST00000484767 TMF1P82094 1093 aa12.16□□□□□ -0.46
SND1-211ENST00000484767 RTL5Q5HYW3 569 aaPredicted RBP12.16□□□□□ -0.46
SND1-211ENST00000484767 ARAP3Q8WWN8 1544 aa12.16□□□□□ -0.46
SND1-211ENST00000484767 CHD1O14646 1710 aa12.15□□□□□ -0.46
SND1-211ENST00000484767 SCAPERQ9BY12 1400 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms