RNA–Protein interactions for RNA: ENST00000484552.5

CAST-210, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 1,767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-210ENST00000484552 MRC2Q9UBG0 1479 aa10.75□□□□□ -0.69
CAST-210ENST00000484552 MYBPC2Q14324 1141 aa10.74□□□□□ -0.69
CAST-210ENST00000484552 ZC3H4Q9UPT8 1303 aaKnown RBP10.73□□□□□ -0.69
CAST-210ENST00000484552 WDR62O43379 1518 aa10.73□□□□□ -0.69
CAST-210ENST00000484552 TOP2AP11388 1531 aaKnown RBP10.73□□□□□ -0.69
CAST-210ENST00000484552 ECM2O94769 699 aaPredicted RBP10.73□□□□□ -0.69
CAST-210ENST00000484552 RALBP1Q15311 655 aa10.73□□□□□ -0.69
CAST-210ENST00000484552 MKRN3Q13064 507 aaKnown RBP10.72□□□□□ -0.69
CAST-210ENST00000484552 PRDM4Q9UKN5 801 aa10.72□□□□□ -0.69
CAST-210ENST00000484552 CFTRP13569 1480 aa10.72□□□□□ -0.69
CAST-210ENST00000484552 CEP164Q9UPV0 1460 aa10.71□□□□□ -0.69
CAST-210ENST00000484552 BARGINQ6ZT62 677 aa10.71□□□□□ -0.69
CAST-210ENST00000484552 APBB1IPQ7Z5R6 666 aaPredicted RBP10.71□□□□□ -0.69
CAST-210ENST00000484552 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.71□□□□□ -0.697e-19■■■■■ 104.3
CAST-210ENST00000484552 RBM27Q9P2N5 1060 aaKnown RBP10.71□□□□□ -0.69
CAST-210ENST00000484552 SUGT1Q9Y2Z0 365 aa10.71□□□□□ -0.69
CAST-210ENST00000484552 IRX3P78415 501 aaPredicted RBP10.7□□□□□ -0.7
CAST-210ENST00000484552 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.7□□□□□ -0.7
CAST-210ENST00000484552 IGSF5Q9NSI5 407 aa10.7□□□□□ -0.7
CAST-210ENST00000484552 SH3BP1Q9Y3L3 701 aa10.7□□□□□ -0.7
CAST-210ENST00000484552 FANCD2Q9BXW9 1451 aa10.69□□□□□ -0.7
CAST-210ENST00000484552 RBM42Q9BTD8 480 aaKnown RBP10.69□□□□□ -0.7
CAST-210ENST00000484552 HMGB1P1B2RPK0 211 aaPredicted RBP10.68□□□□□ -0.7
CAST-210ENST00000484552 IRF5Q13568 498 aa10.68□□□□□ -0.7
CAST-210ENST00000484552 WDR70Q9NW82 654 aa10.68□□□□□ -0.7
CAST-210ENST00000484552 ZNF219Q9P2Y4 722 aaPredicted RBP10.68□□□□□ -0.7
CAST-210ENST00000484552 SOX12O15370 315 aa10.67□□□□□ -0.7
CAST-210ENST00000484552 APPP05067 770 aa10.67□□□□□ -0.7
CAST-210ENST00000484552 RBM26Q5T8P6 1007 aaKnown RBP10.67□□□□□ -0.7
CAST-210ENST00000484552 MTA3Q9BTC8 594 aa10.67□□□□□ -0.7
CAST-210ENST00000484552 SLC52A1Q9NWF4 448 aa10.67□□□□□ -0.7
CAST-210ENST00000484552 TESPA1A2RU30 521 aaPredicted RBP10.67□□□□□ -0.7
CAST-210ENST00000484552 RGL2O15211 777 aa10.67□□□□□ -0.7
CAST-210ENST00000484552 NRDCO43847 1150 aa10.67□□□□□ -0.7
CAST-210ENST00000484552 CALRP27797 417 aaKnown RBP10.67□□□□□ -0.7
CAST-210ENST00000484552 SDR16C5Q8N3Y7 309 aa10.67□□□□□ -0.7
CAST-210ENST00000484552 ZC3H15Q8WU90 426 aaKnown RBP10.67□□□□□ -0.7
CAST-210ENST00000484552 ANKRD62A6NC57 917 aa10.66□□□□□ -0.7
CAST-210ENST00000484552 CCDC96Q2M329 555 aa10.66□□□□□ -0.7
CAST-210ENST00000484552 PSEN1P49768 467 aa10.65□□□□□ -0.7
CAST-210ENST00000484552 MCCD1P59942 119 aaPredicted RBP10.65□□□□□ -0.7
CAST-210ENST00000484552 CDCA8Q53HL2 280 aa10.65□□□□□ -0.7
CAST-210ENST00000484552 ATXN8OSP0DMR3 200 aa10.65□□□□□ -0.71
CAST-210ENST00000484552 RETREG2Q8NC44 543 aa10.65□□□□□ -0.71
CAST-210ENST00000484552 CENPJQ9HC77 1338 aaPredicted RBP10.64□□□□□ -0.71
CAST-210ENST00000484552 ZNF830Q96NB3 372 aaPredicted RBP10.64□□□□□ -0.71
CAST-210ENST00000484552 UBA5Q9GZZ9 404 aa10.64□□□□□ -0.71
CAST-210ENST00000484552 ABCB7O75027 752 aa10.63□□□□□ -0.71
CAST-210ENST00000484552 EGFL6Q8IUX8 553 aa10.62□□□□□ -0.71
CAST-210ENST00000484552 RIOK3O14730 519 aaKnown RBP10.62□□□□□ -0.71
CAST-210ENST00000484552 CHRDL2Q6WN34 429 aa10.62□□□□□ -0.71
CAST-210ENST00000484552 KRBA2Q6ZNG9 492 aa10.62□□□□□ -0.71
CAST-210ENST00000484552 IL27Q8NEV9 243 aa10.62□□□□□ -0.71
CAST-210ENST00000484552 C11orf95C9JLR9 678 aaPredicted RBP10.61□□□□□ -0.71
CAST-210ENST00000484552 HSP90AA2PQ14568 343 aaPredicted RBP10.61□□□□□ -0.71
CAST-210ENST00000484552 LONRF3Q496Y0 759 aa10.61□□□□□ -0.71
CAST-210ENST00000484552 OTUD6BQ8N6M0 293 aa10.61□□□□□ -0.71
CAST-210ENST00000484552 HIRIP3Q9BW71 556 aaPredicted RBP10.61□□□□□ -0.71
CAST-210ENST00000484552 CARD10Q9BWT7 1032 aa10.61□□□□□ -0.71
CAST-210ENST00000484552 RPS6KL1Q9Y6S9 549 aa10.61□□□□□ -0.71
CAST-210ENST00000484552 URB2Q14146 1524 aaKnown RBP10.61□□□□□ -0.71
CAST-210ENST00000484552 UNCXA6NJT0 531 aa10.6□□□□□ -0.71
CAST-210ENST00000484552 CCER2I3L3R5 266 aa10.6□□□□□ -0.71
CAST-210ENST00000484552 ANP32CO43423 234 aa10.6□□□□□ -0.71
CAST-210ENST00000484552 TRAK2O60296 914 aa10.6□□□□□ -0.71
CAST-210ENST00000484552 CHGAP10645 457 aaKnown RBP10.6□□□□□ -0.71
CAST-210ENST00000484552 FOXD4Q12950 439 aaPredicted RBP10.6□□□□□ -0.71
CAST-210ENST00000484552 NBPF9Q3BBW0 867 aa10.6□□□□□ -0.71
CAST-210ENST00000484552 MICAL1Q8TDZ2 1067 aa10.6□□□□□ -0.71
CAST-210ENST00000484552 GPBP1L1Q9HC44 474 aaPredicted RBP10.6□□□□□ -0.71
CAST-210ENST00000484552 NOP58Q9Y2X3 529 aaKnown RBP10.6□□□□□ -0.71
CAST-210ENST00000484552 MYCNP04198 464 aaPredicted RBP10.6□□□□□ -0.71
CAST-210ENST00000484552 SETDB1Q15047 1291 aa10.6□□□□□ -0.71
CAST-210ENST00000484552 CC2D1BQ5T0F9 858 aaKnown RBP10.6□□□□□ -0.71
CAST-210ENST00000484552 SIRT1Q96EB6 747 aa10.6□□□□□ -0.71
CAST-210ENST00000484552 TSPAN18Q96SJ8 248 aa10.6□□□□□ -0.71
CAST-210ENST00000484552 CCDC88BA6NC98 1476 aa10.59□□□□□ -0.71
CAST-210ENST00000484552 GOLIM4O00461 696 aa10.59□□□□□ -0.71
CAST-210ENST00000484552 SP7Q8TDD2 431 aaPredicted RBP10.57□□□□□ -0.72
CAST-210ENST00000484552 MORC4Q8TE76 937 aa10.57□□□□□ -0.72
CAST-210ENST00000484552 MKL1Q969V6 931 aa10.57□□□□□ -0.72
CAST-210ENST00000484552 PLCD3Q8N3E9 789 aa10.57□□□□□ -0.72
CAST-210ENST00000484552 NUB1Q9Y5A7 615 aa10.57□□□□□ -0.72
CAST-210ENST00000484552 EVI5LQ96CN4 794 aa10.56□□□□□ -0.72
CAST-210ENST00000484552 TCERG1O14776 1098 aaKnown RBP10.55□□□□□ -0.72
CAST-210ENST00000484552 HDAC1Q13547 482 aaPredicted RBP10.55□□□□□ -0.72
CAST-210ENST00000484552 PRDM2Q13029 1718 aa10.55□□□□□ -0.72
CAST-210ENST00000484552 PPFIA4O75335 1185 aa10.54□□□□□ -0.72
CAST-210ENST00000484552 HSP90AB3PQ58FF7 597 aa10.54□□□□□ -0.72
CAST-210ENST00000484552 DRC1Q96MC2 740 aa10.54□□□□□ -0.72
CAST-210ENST00000484552 MAGEC2Q9UBF1 373 aaPredicted RBP10.54□□□□□ -0.72
CAST-210ENST00000484552 LIG1P18858 919 aa10.54□□□□□ -0.72
CAST-210ENST00000484552 ANP32AP39687 249 aaKnown RBP10.54□□□□□ -0.72
CAST-210ENST00000484552 WDR78Q5VTH9 848 aa10.54□□□□□ -0.72
CAST-210ENST00000484552 ARMCX6Q7L4S7 300 aa10.54□□□□□ -0.72
CAST-210ENST00000484552 TMEM51Q9NW97 253 aa10.54□□□□□ -0.72
CAST-210ENST00000484552 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.53□□□□□ -0.72
CAST-210ENST00000484552 SLC4A2P04920 1241 aa10.53□□□□□ -0.72
CAST-210ENST00000484552 ARID4AP29374 1257 aaPredicted RBP10.53□□□□□ -0.72
CAST-210ENST00000484552 SEMA3FQ13275 785 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms