RNA–Protein interactions for RNA: ENST00000479866.5

RAPGEF3-209, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2

Gene RAPGEF3, Length 3,917 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-209ENST00000479866 SAFB2Q14151 953 aaKnown RBP eCLIP15.66■□□□□ 0.1
RAPGEF3-209ENST00000479866 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.66■□□□□ 0.1
RAPGEF3-209ENST00000479866 ST20-MTHFSA0A0A6YYL1 179 aa15.65■□□□□ 0.1
RAPGEF3-209ENST00000479866 UBE2Q2Q8WVN8 375 aa15.65■□□□□ 0.1
RAPGEF3-209ENST00000479866 CLASP1Q7Z460 1538 aa15.65■□□□□ 0.1
RAPGEF3-209ENST00000479866 KDM5BQ9UGL1 1544 aa15.64■□□□□ 0.09
RAPGEF3-209ENST00000479866 KDM6BO15054 1643 aa15.63■□□□□ 0.09
RAPGEF3-209ENST00000479866 DNMT1P26358 1616 aaKnown RBP15.63■□□□□ 0.09
RAPGEF3-209ENST00000479866 MRS2Q9HD23 443 aa15.62■□□□□ 0.09
RAPGEF3-209ENST00000479866 STK26Q9P289 416 aa15.62■□□□□ 0.09
RAPGEF3-209ENST00000479866 TTC37Q6PGP7 1564 aa15.62■□□□□ 0.09
RAPGEF3-209ENST00000479866 NBPF1Q3BBV0 1214 aa15.61■□□□□ 0.09
RAPGEF3-209ENST00000479866 HNRNPUQ00839 825 aaKnown RBP eCLIP15.61■□□□□ 0.09
RAPGEF3-209ENST00000479866 TMC1Q8TDI8 760 aa15.61■□□□□ 0.09
RAPGEF3-209ENST00000479866 ZCCHC11Q5TAX3 1644 aaKnown RBP15.6■□□□□ 0.09
RAPGEF3-209ENST00000479866 MBD5Q9P267 1494 aa15.58■□□□□ 0.09
RAPGEF3-209ENST00000479866 UHRF1BP1LA0JNW5 1464 aa15.58■□□□□ 0.08
RAPGEF3-209ENST00000479866 NEFLP07196 543 aa15.57■□□□□ 0.08
RAPGEF3-209ENST00000479866 USP47Q96K76 1375 aa15.57■□□□□ 0.08
RAPGEF3-209ENST00000479866 TRAK1Q9UPV9 953 aa15.55■□□□□ 0.08
RAPGEF3-209ENST00000479866 SAMD9LQ8IVG5 1584 aa15.55■□□□□ 0.08
RAPGEF3-209ENST00000479866 CC2D1BQ5T0F9 858 aaKnown RBP15.54■□□□□ 0.08
RAPGEF3-209ENST00000479866 SHROOM2Q13796 1616 aa15.54■□□□□ 0.08
RAPGEF3-209ENST00000479866 WASHC2AQ641Q2 1341 aa15.53■□□□□ 0.08
RAPGEF3-209ENST00000479866 DENND4BO75064 1496 aaPredicted RBP15.53■□□□□ 0.08
RAPGEF3-209ENST00000479866 CDC42BPAQ5VT25 1732 aa15.53■□□□□ 0.08
RAPGEF3-209ENST00000479866 ARHGEF12Q9NZN5 1544 aa15.53■□□□□ 0.08
RAPGEF3-209ENST00000479866 GLIPR1L2Q4G1C9 344 aa15.52■□□□□ 0.08
RAPGEF3-209ENST00000479866 PZPP20742 1482 aa15.52■□□□□ 0.08
RAPGEF3-209ENST00000479866 TMF1P82094 1093 aa15.52■□□□□ 0.08
RAPGEF3-209ENST00000479866 CFAP70Q5T0N1 1121 aa15.52■□□□□ 0.08
RAPGEF3-209ENST00000479866 ADCY10Q96PN6 1610 aa15.52■□□□□ 0.07
RAPGEF3-209ENST00000479866 DHX29Q7Z478 1369 aaKnown RBP15.52■□□□□ 0.07
RAPGEF3-209ENST00000479866 TMEM132EQ6IEE7 984 aa15.51■□□□□ 0.07
RAPGEF3-209ENST00000479866 RPRD2Q5VT52 1461 aaKnown RBP15.51■□□□□ 0.07
RAPGEF3-209ENST00000479866 POGKQ9P215 609 aa15.51■□□□□ 0.07
RAPGEF3-209ENST00000479866 C11orf95C9JLR9 678 aaPredicted RBP15.5■□□□□ 0.07
RAPGEF3-209ENST00000479866 FBXO31Q5XUX0 539 aaPredicted RBP15.49■□□□□ 0.07
RAPGEF3-209ENST00000479866 ADGRL2O95490 1459 aa15.49■□□□□ 0.07
RAPGEF3-209ENST00000479866 SHANK2Q9UPX8 1470 aa15.49■□□□□ 0.07
RAPGEF3-209ENST00000479866 MYO5CQ9NQX4 1742 aa15.49■□□□□ 0.07
RAPGEF3-209ENST00000479866 KIF7Q2M1P5 1343 aa15.49■□□□□ 0.07
RAPGEF3-209ENST00000479866 TNNT2P45379 298 aaPredicted RBP15.47■□□□□ 0.07
RAPGEF3-209ENST00000479866 ZNF518AQ6AHZ1 1483 aa15.46■□□□□ 0.07
RAPGEF3-209ENST00000479866 FAM135AQ9P2D6 1515 aa15.46■□□□□ 0.07
RAPGEF3-209ENST00000479866 PREX2Q70Z35 1606 aa15.46■□□□□ 0.07
RAPGEF3-209ENST00000479866 KNSTRNQ9Y448 316 aa15.46■□□□□ 0.07
RAPGEF3-209ENST00000479866 DUOX2Q9NRD8 1548 aa15.46■□□□□ 0.06
RAPGEF3-209ENST00000479866 AEBP2Q6ZN18 517 aaPredicted RBP15.44■□□□□ 0.06
RAPGEF3-209ENST00000479866 A2MP01023 1474 aa15.44■□□□□ 0.06
RAPGEF3-209ENST00000479866 CCDC7Q96M83 1385 aa15.43■□□□□ 0.06
RAPGEF3-209ENST00000479866 CDC42BPBQ9Y5S2 1711 aa15.43■□□□□ 0.06
RAPGEF3-209ENST00000479866 GCC2Q8IWJ2 1684 aa15.43■□□□□ 0.06
RAPGEF3-209ENST00000479866 SRPK2P78362 688 aaKnown RBP15.43■□□□□ 0.06
RAPGEF3-209ENST00000479866 CDCA8Q53HL2 280 aa15.42■□□□□ 0.06
RAPGEF3-209ENST00000479866 ERBINQ96RT1 1412 aa15.42■□□□□ 0.06
RAPGEF3-209ENST00000479866 VGFO15240 615 aaPredicted RBP15.41■□□□□ 0.06
RAPGEF3-209ENST00000479866 CEBPAP49715 358 aaPredicted RBP15.41■□□□□ 0.06
RAPGEF3-209ENST00000479866 IDI1Q13907 227 aa15.41■□□□□ 0.06
RAPGEF3-209ENST00000479866 DEKP35659 375 aaKnown RBP15.41■□□□□ 0.06
RAPGEF3-209ENST00000479866 PDE4CQ08493 712 aa15.41■□□□□ 0.06
RAPGEF3-209ENST00000479866 ARHGEF5Q12774 1597 aa15.4■□□□□ 0.06
RAPGEF3-209ENST00000479866 ATP7AQ04656 1500 aa15.4■□□□□ 0.06
RAPGEF3-209ENST00000479866 ADGRF5Q8IZF2 1346 aa15.39■□□□□ 0.05
RAPGEF3-209ENST00000479866 NUTM2FA1L443 756 aa15.39■□□□□ 0.05
RAPGEF3-209ENST00000479866 PANK3Q9H999 370 aa15.39■□□□□ 0.05
RAPGEF3-209ENST00000479866 ABCC1P33527 1531 aa15.39■□□□□ 0.05
RAPGEF3-209ENST00000479866 CFAP65Q6ZU64 1925 aaKnown RBP15.39■□□□□ 0.05
RAPGEF3-209ENST00000479866 RTEL1-TNFRSF6BF6WH68 1400 aa15.38■□□□□ 0.05
RAPGEF3-209ENST00000479866 YEATS2Q9ULM3 1422 aa15.38■□□□□ 0.05
RAPGEF3-209ENST00000479866 TSPOAP1O95153 1857 aa15.37■□□□□ 0.05
RAPGEF3-209ENST00000479866 PRKRIP1Q9H875 184 aaPredicted RBP15.37■□□□□ 0.05
RAPGEF3-209ENST00000479866 ADGBQ8N7X0 1667 aa15.37■□□□□ 0.05
RAPGEF3-209ENST00000479866 POGZQ7Z3K3 1410 aa15.36■□□□□ 0.05
RAPGEF3-209ENST00000479866 IRX6P78412 446 aaPredicted RBP15.36■□□□□ 0.05
RAPGEF3-209ENST00000479866 MINK1Q8N4C8 1332 aaPredicted RBP15.35■□□□□ 0.05
RAPGEF3-209ENST00000479866 CCER2I3L3R5 266 aa15.35■□□□□ 0.05
RAPGEF3-209ENST00000479866 C14orf37Q86TY3 774 aa15.34■□□□□ 0.05
RAPGEF3-209ENST00000479866 PPM1GO15355 546 aaPredicted RBP15.33■□□□□ 0.05
RAPGEF3-209ENST00000479866 FKBP8Q14318 412 aa15.33■□□□□ 0.04
RAPGEF3-209ENST00000479866 RIMBP3CA6NJZ7 1639 aa15.33■□□□□ 0.04
RAPGEF3-209ENST00000479866 RIMBP3BA6NNM3 1639 aa15.33■□□□□ 0.04
RAPGEF3-209ENST00000479866 RIMBP3Q9UFD9 1639 aa15.33■□□□□ 0.04
RAPGEF3-209ENST00000479866 WDR43Q15061 677 aaKnown RBP eCLIP15.33■□□□□ 0.04
RAPGEF3-209ENST00000479866 HDGFP51858 240 aaKnown RBP15.32■□□□□ 0.04
RAPGEF3-209ENST00000479866 RTL5Q5HYW3 569 aaPredicted RBP15.32■□□□□ 0.04
RAPGEF3-209ENST00000479866 VSIG10Q8N0Z9 540 aa15.32■□□□□ 0.04
RAPGEF3-209ENST00000479866 SLC52A1Q9NWF4 448 aa15.32■□□□□ 0.04
RAPGEF3-209ENST00000479866 CCDC184Q52MB2 194 aa15.32■□□□□ 0.04
RAPGEF3-209ENST00000479866 NBR1Q14596 966 aa15.31■□□□□ 0.04
RAPGEF3-209ENST00000479866 TSHZ2Q9NRE2 1034 aa15.31■□□□□ 0.04
RAPGEF3-209ENST00000479866 EIF3AQ14152 1382 aaKnown RBP15.31■□□□□ 0.04
RAPGEF3-209ENST00000479866 TEX14Q8IWB6 1497 aa15.3■□□□□ 0.04
RAPGEF3-209ENST00000479866 CENPJQ9HC77 1338 aaPredicted RBP15.29■□□□□ 0.04
RAPGEF3-209ENST00000479866 SOX12O15370 315 aa15.29■□□□□ 0.04
RAPGEF3-209ENST00000479866 EID1Q9Y6B2 187 aa15.28■□□□□ 0.04
RAPGEF3-209ENST00000479866 NOS1P29475 1434 aa15.28■□□□□ 0.04
RAPGEF3-209ENST00000479866 NEO1Q92859 1461 aa15.28■□□□□ 0.04
RAPGEF3-209ENST00000479866 KTN1Q86UP2 1357 aaKnown RBP15.28■□□□□ 0.04
RAPGEF3-209ENST00000479866 CNTLNQ9NXG0 1405 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms