RNA–Protein interactions for RNA: ENST00000478886.1

CMTM6-202, Transcript of CKLF like MARVEL transmembrane domain containing 6, humanhuman

TSL 2

Gene CMTM6, Length 803 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM6-202ENST00000478886 HAP1P54257 671 aaPredicted RBP12.83□□□□□ -0.36
CMTM6-202ENST00000478886 EMILIN3Q9NT22 766 aa12.83□□□□□ -0.36
CMTM6-202ENST00000478886 ERBB3P21860 1342 aa12.83□□□□□ -0.36
CMTM6-202ENST00000478886 SOGA1O94964 1423 aa12.82□□□□□ -0.36
CMTM6-202ENST00000478886 HS3ST6Q96QI5 342 aa12.81□□□□□ -0.36
CMTM6-202ENST00000478886 RAD54L2Q9Y4B4 1467 aa12.8□□□□□ -0.36
CMTM6-202ENST00000478886 ZNF316A6NFI3 1004 aaPredicted RBP12.79□□□□□ -0.36
CMTM6-202ENST00000478886 VARS2Q5ST30 1063 aaKnown RBP12.79□□□□□ -0.36
CMTM6-202ENST00000478886 TARBP1Q13395 1621 aaKnown RBP12.79□□□□□ -0.36
CMTM6-202ENST00000478886 KDM4FA0A1W2PPD8 638 aa12.78□□□□□ -0.36
CMTM6-202ENST00000478886 E2F4Q16254 413 aa12.78□□□□□ -0.36
CMTM6-202ENST00000478886 WDR97A6NE52 1622 aa12.77□□□□□ -0.36
CMTM6-202ENST00000478886 ABCA10Q8WWZ4 1543 aa12.77□□□□□ -0.37
CMTM6-202ENST00000478886 POTEB3A0JP26 581 aa12.76□□□□□ -0.37
CMTM6-202ENST00000478886 MAP3K9P80192 1104 aa12.76□□□□□ -0.37
CMTM6-202ENST00000478886 POTEBQ6S5H4 581 aa12.76□□□□□ -0.37
CMTM6-202ENST00000478886 LHX6Q9UPM6 363 aa12.76□□□□□ -0.37
CMTM6-202ENST00000478886 CDAN1Q8IWY9 1227 aa12.74□□□□□ -0.37
CMTM6-202ENST00000478886 DPYSL4O14531 572 aa12.73□□□□□ -0.37
CMTM6-202ENST00000478886 EVI5O60447 810 aa12.72□□□□□ -0.37
CMTM6-202ENST00000478886 EIF4G3O43432 1585 aaKnown RBP12.72□□□□□ -0.37
CMTM6-202ENST00000478886 ZNF608Q9ULD9 1512 aaPredicted RBP12.72□□□□□ -0.37
CMTM6-202ENST00000478886 PSDA5PKW4 1024 aaPredicted RBP12.71□□□□□ -0.37
CMTM6-202ENST00000478886 KIF27Q86VH2 1401 aa12.71□□□□□ -0.38
CMTM6-202ENST00000478886 TDRD9Q8NDG6 1382 aaKnown RBP12.7□□□□□ -0.38
CMTM6-202ENST00000478886 ABCA5Q8WWZ7 1642 aa12.7□□□□□ -0.38
CMTM6-202ENST00000478886 AQRO60306 1485 aaKnown RBP eCLIP12.68□□□□□ -0.38
CMTM6-202ENST00000478886 GAPVD1Q14C86 1478 aa12.68□□□□□ -0.38
CMTM6-202ENST00000478886 PBRM1Q86U86 1689 aa12.67□□□□□ -0.38
CMTM6-202ENST00000478886 ANO8Q9HCE9 1232 aaPredicted RBP12.67□□□□□ -0.38
CMTM6-202ENST00000478886 ARIH1Q9Y4X5 557 aaPredicted RBP12.67□□□□□ -0.38
CMTM6-202ENST00000478886 EEA1Q15075 1411 aa12.66□□□□□ -0.38
CMTM6-202ENST00000478886 ZNF687Q8N1G0 1237 aa12.66□□□□□ -0.38
CMTM6-202ENST00000478886 GRIN2BQ13224 1484 aa12.65□□□□□ -0.38
CMTM6-202ENST00000478886 PDIA6Q15084 440 aa12.65□□□□□ -0.38
CMTM6-202ENST00000478886 PPP4R3BQ5MIZ7 849 aa12.65□□□□□ -0.38
CMTM6-202ENST00000478886 KCNV2Q8TDN2 545 aa12.65□□□□□ -0.38
CMTM6-202ENST00000478886 P3H3Q8IVL6 736 aa12.64□□□□□ -0.39
CMTM6-202ENST00000478886 ERICH3Q5RHP9 1530 aa12.63□□□□□ -0.39
CMTM6-202ENST00000478886 JPH4Q96JJ6 628 aa12.63□□□□□ -0.39
CMTM6-202ENST00000478886 RUSC2Q8N2Y8 1516 aa12.62□□□□□ -0.39
CMTM6-202ENST00000478886 SPDYE16A6NNV3 312 aaPredicted RBP12.62□□□□□ -0.39
CMTM6-202ENST00000478886 ZNF454Q8N9F8 522 aa12.62□□□□□ -0.39
CMTM6-202ENST00000478886 FOSBP53539 338 aa12.61□□□□□ -0.39
CMTM6-202ENST00000478886 VSIG10Q8N0Z9 540 aa12.61□□□□□ -0.39
CMTM6-202ENST00000478886 KDM2AQ9Y2K7 1162 aa12.61□□□□□ -0.39
CMTM6-202ENST00000478886 SNAPC4Q5SXM2 1469 aa12.6□□□□□ -0.39
CMTM6-202ENST00000478886 FAM9AQ8IZU1 332 aaPredicted RBP12.6□□□□□ -0.39
CMTM6-202ENST00000478886 KRTAP3-3Q9BYR6 98 aa12.6□□□□□ -0.39
CMTM6-202ENST00000478886 KRTAP3-2Q9BYR7 98 aa12.6□□□□□ -0.39
CMTM6-202ENST00000478886 CUL7Q14999 1698 aa12.6□□□□□ -0.39
CMTM6-202ENST00000478886 MAGI1Q96QZ7 1491 aaPredicted RBP12.59□□□□□ -0.39
CMTM6-202ENST00000478886 ARHGEF1Q92888 912 aaKnown RBP12.59□□□□□ -0.39
CMTM6-202ENST00000478886 PBX2P40425 430 aa12.58□□□□□ -0.4
CMTM6-202ENST00000478886 IGF1RP08069 1367 aa12.57□□□□□ -0.4
CMTM6-202ENST00000478886 ADAMTS12P58397 1594 aa12.57□□□□□ -0.4
CMTM6-202ENST00000478886 FHAD1B1AJZ9 1412 aa12.55□□□□□ -0.4
CMTM6-202ENST00000478886 PTGER2P43116 358 aa12.55□□□□□ -0.4
CMTM6-202ENST00000478886 PHF14O94880 888 aa12.54□□□□□ -0.4
CMTM6-202ENST00000478886 PCDHGA10Q9Y5H3 936 aa12.54□□□□□ -0.4
CMTM6-202ENST00000478886 CARMIL1Q5VZK9 1371 aa12.54□□□□□ -0.4
CMTM6-202ENST00000478886 SYNJ2O15056 1496 aa12.53□□□□□ -0.4
CMTM6-202ENST00000478886 POTEEQ6S8J3 1075 aa12.53□□□□□ -0.4
CMTM6-202ENST00000478886 DDX12PQ92771 950 aa12.53□□□□□ -0.4
CMTM6-202ENST00000478886 ZDHHC16Q969W1 377 aa12.53□□□□□ -0.4
CMTM6-202ENST00000478886 TYW1BQ6NUM6 668 aa12.52□□□□□ -0.41
CMTM6-202ENST00000478886 CHMP7Q8WUX9 453 aaPredicted RBP12.52□□□□□ -0.41
CMTM6-202ENST00000478886 FBXW7Q969H0 707 aa12.52□□□□□ -0.41
CMTM6-202ENST00000478886 KCNH8Q96L42 1107 aa12.52□□□□□ -0.41
CMTM6-202ENST00000478886 BCL2L12Q9HB09 334 aa12.52□□□□□ -0.41
CMTM6-202ENST00000478886 AXIN2Q9Y2T1 843 aa12.52□□□□□ -0.41
CMTM6-202ENST00000478886 CHD1O14646 1710 aa12.51□□□□□ -0.41
CMTM6-202ENST00000478886 ARHGAP33O14559 1287 aa12.51□□□□□ -0.41
CMTM6-202ENST00000478886 EPAS1Q99814 870 aa12.51□□□□□ -0.41
CMTM6-202ENST00000478886 RAPGEF2Q9Y4G8 1499 aa12.51□□□□□ -0.41
CMTM6-202ENST00000478886 KCNK17Q96T54 332 aa12.5□□□□□ -0.41
CMTM6-202ENST00000478886 PRXQ9BXM0 1461 aa12.5□□□□□ -0.41
CMTM6-202ENST00000478886 KIF21BO75037 1637 aa12.5□□□□□ -0.41
CMTM6-202ENST00000478886 LSM11P83369 360 aaKnown RBP eCLIP12.49□□□□□ -0.41
CMTM6-202ENST00000478886 ADAM33Q9BZ11 813 aa12.49□□□□□ -0.41
CMTM6-202ENST00000478886 GRIN2AQ12879 1464 aa12.48□□□□□ -0.41
CMTM6-202ENST00000478886 NBR1Q14596 966 aa12.48□□□□□ -0.41
CMTM6-202ENST00000478886 PTPREP23469 700 aa12.47□□□□□ -0.41
CMTM6-202ENST00000478886 PSEN2P49810 448 aa12.47□□□□□ -0.41
CMTM6-202ENST00000478886 GRXCR2A6NFK2 248 aa12.46□□□□□ -0.41
CMTM6-202ENST00000478886 GOLGA3Q08378 1498 aa12.46□□□□□ -0.42
CMTM6-202ENST00000478886 ANKRD13DQ6ZTN6 518 aa12.44□□□□□ -0.42
CMTM6-202ENST00000478886 EN1Q05925 392 aaPredicted RBP12.43□□□□□ -0.42
CMTM6-202ENST00000478886 DMRTA1Q5VZB9 504 aa12.42□□□□□ -0.42
CMTM6-202ENST00000478886 RBM33Q96EV2 1170 aaKnown RBP12.42□□□□□ -0.42
CMTM6-202ENST00000478886 CEP170Q5SW79 1584 aa12.41□□□□□ -0.42
CMTM6-202ENST00000478886 SPNS2Q8IVW8 549 aa12.41□□□□□ -0.42
CMTM6-202ENST00000478886 CTTNBP2Q8WZ74 1663 aa12.41□□□□□ -0.42
CMTM6-202ENST00000478886 NUP160Q12769 1436 aa12.4□□□□□ -0.42
CMTM6-202ENST00000478886 PPP1R3GB7ZBB8 358 aa12.39□□□□□ -0.43
CMTM6-202ENST00000478886 MAP3K7O43318 606 aa12.39□□□□□ -0.43
CMTM6-202ENST00000478886 UBTFP17480 764 aaKnown RBP12.39□□□□□ -0.43
CMTM6-202ENST00000478886 MLLT3P42568 568 aaPredicted RBP12.39□□□□□ -0.43
CMTM6-202ENST00000478886 TK2O00142 265 aa12.38□□□□□ -0.43
CMTM6-202ENST00000478886 SEMA3EO15041 775 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms