RNA–Protein interactions for RNA: ENST00000478886.1

CMTM6-202, Transcript of CKLF like MARVEL transmembrane domain containing 6, humanhuman

TSL 2

Gene CMTM6, Length 803 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM6-202ENST00000478886 AEBP2Q6ZN18 517 aaPredicted RBP28.75■■■□□ 2.19
CMTM6-202ENST00000478886 CHIC1Q5VXU3 224 aa27.92■■■□□ 2.06
CMTM6-202ENST00000478886 PHF23Q9BUL5 403 aaPredicted RBP24.49■■□□□ 1.51
CMTM6-202ENST00000478886 SENP3Q9H4L4 574 aaPredicted RBP24.48■■□□□ 1.51
CMTM6-202ENST00000478886 FOXD1Q16676 465 aa22.7■■□□□ 1.22
CMTM6-202ENST00000478886 PLPPR3Q6T4P5 718 aa22.6■■□□□ 1.21
CMTM6-202ENST00000478886 ADRA2BP18089 450 aa21.66■■□□□ 1.06
CMTM6-202ENST00000478886 PPP6R1Q9UPN7 881 aa21.66■■□□□ 1.06
CMTM6-202ENST00000478886 PIAS4Q8N2W9 510 aaPredicted RBP21.4■■□□□ 1.02
CMTM6-202ENST00000478886 POTEDQ86YR6 584 aa21.17■□□□□ 0.98
CMTM6-202ENST00000478886 MSH5O43196 834 aa21.05■□□□□ 0.96
CMTM6-202ENST00000478886 PPP4R3CPQ6ZMV5 832 aa19.87■□□□□ 0.77
CMTM6-202ENST00000478886 SCAF1Q9H7N4 1312 aaKnown RBP19.85■□□□□ 0.77
CMTM6-202ENST00000478886 MAPK8IP2Q13387 824 aaPredicted RBP19.68■□□□□ 0.74
CMTM6-202ENST00000478886 DMRT2Q9Y5R5 561 aa19.5■□□□□ 0.71
CMTM6-202ENST00000478886 CNKSR2Q8WXI2 1034 aa19.37■□□□□ 0.69
CMTM6-202ENST00000478886 NCBP3Q53F19 620 aaKnown RBP19.32■□□□□ 0.68
CMTM6-202ENST00000478886 KCNA4P22459 653 aa19.19■□□□□ 0.66
CMTM6-202ENST00000478886 RNF216Q9NWF9 866 aaPredicted RBP19.03■□□□□ 0.64
CMTM6-202ENST00000478886 NPM3O75607 178 aaKnown RBP19.01■□□□□ 0.63
CMTM6-202ENST00000478886 HOXD11P31277 338 aaPredicted RBP19.01■□□□□ 0.63
CMTM6-202ENST00000478886 DCAF8L1A6NGE4 600 aa18.67■□□□□ 0.58
CMTM6-202ENST00000478886 DNAJC5BQ9UF47 199 aa18.51■□□□□ 0.55
CMTM6-202ENST00000478886 SLC4A1APQ9BWU0 796 aaKnown RBP18.26■□□□□ 0.51
CMTM6-202ENST00000478886 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.13■□□□□ 0.49
CMTM6-202ENST00000478886 RNF39Q9H2S5 420 aa18■□□□□ 0.47
CMTM6-202ENST00000478886 SLC4A2P04920 1241 aa17.98■□□□□ 0.47
CMTM6-202ENST00000478886 NISCHQ9Y2I1 1504 aa17.93■□□□□ 0.46
CMTM6-202ENST00000478886 U3KPZ7 1027 aaPredicted RBP17.81■□□□□ 0.44
CMTM6-202ENST00000478886 C1QBPQ07021 282 aaKnown RBP17.78■□□□□ 0.44
CMTM6-202ENST00000478886 FOXD4L1Q9NU39 408 aa17.74■□□□□ 0.43
CMTM6-202ENST00000478886 CACNB1Q02641 598 aaPredicted RBP17.68■□□□□ 0.42
CMTM6-202ENST00000478886 ZBTB22O15209 634 aa17.65■□□□□ 0.42
CMTM6-202ENST00000478886 MYCNP04198 464 aaPredicted RBP17.61■□□□□ 0.41
CMTM6-202ENST00000478886 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.55■□□□□ 0.4
CMTM6-202ENST00000478886 HNRNPUL2Q1KMD3 747 aaKnown RBP17.55■□□□□ 0.4
CMTM6-202ENST00000478886 EHMT2Q96KQ7 1210 aa17.51■□□□□ 0.39
CMTM6-202ENST00000478886 SAMD1Q6SPF0 538 aaPredicted RBP17.47■□□□□ 0.39
CMTM6-202ENST00000478886 APLP2Q06481 763 aa17.43■□□□□ 0.38
CMTM6-202ENST00000478886 CSRNP3Q8WYN3 585 aa17.36■□□□□ 0.37
CMTM6-202ENST00000478886 SPINK5Q9NQ38 1064 aaPredicted RBP17.35■□□□□ 0.37
CMTM6-202ENST00000478886 CAPN15O75808 1086 aa17.31■□□□□ 0.36
CMTM6-202ENST00000478886 ZNF219Q9P2Y4 722 aaPredicted RBP17.2■□□□□ 0.34
CMTM6-202ENST00000478886 TRHP20396 242 aaPredicted RBP17.17■□□□□ 0.34
CMTM6-202ENST00000478886 ATXN8OSP0DMR3 200 aa17.14■□□□□ 0.33
CMTM6-202ENST00000478886 ATF5Q9Y2D1 282 aaPredicted RBP17.09■□□□□ 0.33
CMTM6-202ENST00000478886 DSG3P32926 999 aa17.05■□□□□ 0.32
CMTM6-202ENST00000478886 ABCB7O75027 752 aa16.97■□□□□ 0.31
CMTM6-202ENST00000478886 POLA2Q14181 598 aa16.84■□□□□ 0.29
CMTM6-202ENST00000478886 ZBTB12Q9Y330 459 aaPredicted RBP16.61■□□□□ 0.25
CMTM6-202ENST00000478886 FBLN2P98095 1184 aa16.45■□□□□ 0.22
CMTM6-202ENST00000478886 POTEHQ6S545 545 aa16.36■□□□□ 0.21
CMTM6-202ENST00000478886 MKRN4PQ13434 485 aaPredicted RBP16.35■□□□□ 0.21
CMTM6-202ENST00000478886 OSCARQ8IYS5 282 aa16.31■□□□□ 0.2
CMTM6-202ENST00000478886 RBM42Q9BTD8 480 aaKnown RBP16.3■□□□□ 0.2
CMTM6-202ENST00000478886 SPDYE2BA6NHP3 402 aa16.13■□□□□ 0.17
CMTM6-202ENST00000478886 SPDYE6P0CI01 402 aa16.13■□□□□ 0.17
CMTM6-202ENST00000478886 SPDYE2Q495Y8 402 aa16.13■□□□□ 0.17
CMTM6-202ENST00000478886 AKT1S1Q96B36 256 aa16.03■□□□□ 0.16
CMTM6-202ENST00000478886 ZNF692Q9BU19 519 aaPredicted RBP16.01■□□□□ 0.15
CMTM6-202ENST00000478886 SSUH2Q9Y2M2 353 aa15.97■□□□□ 0.15
CMTM6-202ENST00000478886 SPDYE4A6NLX3 237 aa15.91■□□□□ 0.14
CMTM6-202ENST00000478886 CCDC180Q9P1Z9 1646 aa15.86■□□□□ 0.13
CMTM6-202ENST00000478886 REM2Q8IYK8 340 aaPredicted RBP15.86■□□□□ 0.13
CMTM6-202ENST00000478886 PABPN1Q86U42 306 aaKnown RBP eCLIP15.79■□□□□ 0.12
CMTM6-202ENST00000478886 FKBP8Q14318 412 aa15.74■□□□□ 0.11
CMTM6-202ENST00000478886 PITPNM1O00562 1244 aa15.71■□□□□ 0.11
CMTM6-202ENST00000478886 SPDYE1Q8NFV5 336 aaPredicted RBP15.69■□□□□ 0.1
CMTM6-202ENST00000478886 CHRDL2Q6WN34 429 aa15.68■□□□□ 0.1
CMTM6-202ENST00000478886 PROM2Q8N271 834 aa15.62■□□□□ 0.09
CMTM6-202ENST00000478886 CLEC11AQ9Y240 323 aa15.61■□□□□ 0.09
CMTM6-202ENST00000478886 STAG3Q9UJ98 1225 aa15.51■□□□□ 0.07
CMTM6-202ENST00000478886 PRR29P0C7W0 189 aa15.44■□□□□ 0.06
CMTM6-202ENST00000478886 PIP4P2Q8N4L2 257 aa15.43■□□□□ 0.06
CMTM6-202ENST00000478886 FXR2P51116 673 aaKnown RBP eCLIP15.42■□□□□ 0.06
CMTM6-202ENST00000478886 PRKAR2AP13861 404 aaKnown RBP15.3■□□□□ 0.04
CMTM6-202ENST00000478886 FBXO3Q9UK99 471 aa15.26■□□□□ 0.03
CMTM6-202ENST00000478886 ABCC9O60706 1549 aa15.24■□□□□ 0.03
CMTM6-202ENST00000478886 CHADLQ6NUI6 762 aa15.24■□□□□ 0.03
CMTM6-202ENST00000478886 CREBZFQ9NS37 354 aa15.19■□□□□ 0.02
CMTM6-202ENST00000478886 MIER1Q8N108 512 aa15.1■□□□□ 0.01
CMTM6-202ENST00000478886 PLCD3Q8N3E9 789 aa15.09■□□□□ 0.01
CMTM6-202ENST00000478886 FARP1Q9Y4F1 1045 aaPredicted RBP15.09■□□□□ 0.01
CMTM6-202ENST00000478886 PLEKHG5O94827 1062 aa15.08■□□□□ 0
CMTM6-202ENST00000478886 VASPP50552 380 aaPredicted RBP15.06■□□□□ 0
CMTM6-202ENST00000478886 MNX1P50219 401 aaPredicted RBP15.01□□□□□ -0.01
CMTM6-202ENST00000478886 ZCCHC6Q5VYS8 1495 aaKnown RBP15.01□□□□□ -0.01
CMTM6-202ENST00000478886 HAX1O00165 279 aa14.98□□□□□ -0.01
CMTM6-202ENST00000478886 NPM1P06748 294 aaKnown RBP eCLIP14.97□□□□□ -0.01
CMTM6-202ENST00000478886 ZBTB47Q9UFB7 747 aaPredicted RBP14.95□□□□□ -0.02
CMTM6-202ENST00000478886 C19orf67A6NJJ6 358 aa14.91□□□□□ -0.02
CMTM6-202ENST00000478886 DCAF8L2P0C7V8 631 aa14.9□□□□□ -0.02
CMTM6-202ENST00000478886 CD44P16070 742 aaKnown RBP14.86□□□□□ -0.03
CMTM6-202ENST00000478886 DCAF1Q9Y4B6 1507 aa14.86□□□□□ -0.03
CMTM6-202ENST00000478886 NACADO15069 1562 aa14.84□□□□□ -0.03
CMTM6-202ENST00000478886 KLHL34Q8N239 644 aa14.83□□□□□ -0.04
CMTM6-202ENST00000478886 MYO15BQ96JP2 1530 aa14.82□□□□□ -0.04
CMTM6-202ENST00000478886 RB1CC1Q8TDY2 1594 aa14.81□□□□□ -0.04
CMTM6-202ENST00000478886 EVX2Q03828 476 aa14.8□□□□□ -0.04
CMTM6-202ENST00000478886 IFNLR1Q8IU57 520 aaPredicted RBP14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms