RNA–Protein interactions for RNA: ENST00000478139.1

SYCP3-204, Transcript of synaptonemal complex protein 3, humanhuman

TSL 2

Gene SYCP3, Length 3,690 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP3-204ENST00000478139 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.62□□□□□ -0.71
SYCP3-204ENST00000478139 SLC52A1Q9NWF4 448 aa10.62□□□□□ -0.71
SYCP3-204ENST00000478139 POGKQ9P215 609 aa10.62□□□□□ -0.71
SYCP3-204ENST00000478139 ABCC5O15440 1437 aa10.62□□□□□ -0.71
SYCP3-204ENST00000478139 TSHZ2Q9NRE2 1034 aa10.62□□□□□ -0.71
SYCP3-204ENST00000478139 ZFYVE16Q7Z3T8 1539 aa10.62□□□□□ -0.71
SYCP3-204ENST00000478139 YEATS2Q9ULM3 1422 aa10.61□□□□□ -0.71
SYCP3-204ENST00000478139 DCAF11Q8TEB1 546 aa10.61□□□□□ -0.71
SYCP3-204ENST00000478139 MAGI2Q86UL8 1455 aa10.61□□□□□ -0.71
SYCP3-204ENST00000478139 FBXO31Q5XUX0 539 aaPredicted RBP10.61□□□□□ -0.71
SYCP3-204ENST00000478139 HSPA2P54652 639 aa10.6□□□□□ -0.71
SYCP3-204ENST00000478139 VGFO15240 615 aaPredicted RBP10.6□□□□□ -0.71
SYCP3-204ENST00000478139 MYO5CQ9NQX4 1742 aa10.6□□□□□ -0.71
SYCP3-204ENST00000478139 PTPN23Q9H3S7 1636 aa10.6□□□□□ -0.71
SYCP3-204ENST00000478139 CFAP43Q8NDM7 1665 aa10.59□□□□□ -0.71
SYCP3-204ENST00000478139 TTC37Q6PGP7 1564 aa10.59□□□□□ -0.71
SYCP3-204ENST00000478139 SIN3AQ96ST3 1273 aa10.59□□□□□ -0.71
SYCP3-204ENST00000478139 STK26Q9P289 416 aa10.59□□□□□ -0.71
SYCP3-204ENST00000478139 RTEL1-TNFRSF6BF6WH68 1400 aa10.59□□□□□ -0.71
SYCP3-204ENST00000478139 DDX10Q13206 875 aaKnown RBP10.59□□□□□ -0.71
SYCP3-204ENST00000478139 GLI2P10070 1586 aa10.58□□□□□ -0.72
SYCP3-204ENST00000478139 CNTLNQ9NXG0 1405 aa10.58□□□□□ -0.72
SYCP3-204ENST00000478139 TULP1O00294 542 aaPredicted RBP10.58□□□□□ -0.72
SYCP3-204ENST00000478139 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.58□□□□□ -0.72
SYCP3-204ENST00000478139 CCDC144AA2RUR9 1427 aa10.58□□□□□ -0.72
SYCP3-204ENST00000478139 NCOA1Q15788 1441 aa10.57□□□□□ -0.72
SYCP3-204ENST00000478139 HIRIP3Q9BW71 556 aaPredicted RBP10.57□□□□□ -0.72
SYCP3-204ENST00000478139 ROCK1Q13464 1354 aa10.56□□□□□ -0.72
SYCP3-204ENST00000478139 TNRQ92752 1358 aa10.56□□□□□ -0.72
SYCP3-204ENST00000478139 ABCA9Q8IUA7 1624 aa10.56□□□□□ -0.72
SYCP3-204ENST00000478139 ZMYM3Q14202 1370 aa10.56□□□□□ -0.72
SYCP3-204ENST00000478139 HAP1P54257 671 aaPredicted RBP10.56□□□□□ -0.72
SYCP3-204ENST00000478139 CNGB1Q14028 1251 aaPredicted RBP10.56□□□□□ -0.72
SYCP3-204ENST00000478139 ATP7AQ04656 1500 aa10.55□□□□□ -0.72
SYCP3-204ENST00000478139 PLEKHG5O94827 1062 aa10.55□□□□□ -0.72
SYCP3-204ENST00000478139 ARAP3Q8WWN8 1544 aa10.55□□□□□ -0.72
SYCP3-204ENST00000478139 FKBP8Q14318 412 aa10.54□□□□□ -0.72
SYCP3-204ENST00000478139 MLH3Q9UHC1 1453 aa10.54□□□□□ -0.72
SYCP3-204ENST00000478139 SAFB2Q14151 953 aaKnown RBP eCLIP10.53□□□□□ -0.72
SYCP3-204ENST00000478139 LMOD2Q6P5Q4 547 aa10.53□□□□□ -0.72
SYCP3-204ENST00000478139 UHRF1BP1Q6BDS2 1440 aa10.53□□□□□ -0.72
SYCP3-204ENST00000478139 PROSER2Q86WR7 435 aaPredicted RBP10.53□□□□□ -0.72
SYCP3-204ENST00000478139 KLHL34Q8N239 644 aa10.53□□□□□ -0.72
SYCP3-204ENST00000478139 IDI1Q13907 227 aa10.52□□□□□ -0.72
SYCP3-204ENST00000478139 SLC26A8Q96RN1 970 aa10.52□□□□□ -0.72
SYCP3-204ENST00000478139 DUOX2Q9NRD8 1548 aa10.52□□□□□ -0.73
SYCP3-204ENST00000478139 EIF5BO60841 1220 aaKnown RBP10.51□□□□□ -0.73
SYCP3-204ENST00000478139 ABCC1P33527 1531 aa10.51□□□□□ -0.73
SYCP3-204ENST00000478139 COL17A1Q9UMD9 1497 aaPredicted RBP10.5□□□□□ -0.73
SYCP3-204ENST00000478139 ERBINQ96RT1 1412 aa10.5□□□□□ -0.73
SYCP3-204ENST00000478139 CARD11Q9BXL7 1154 aa10.5□□□□□ -0.73
SYCP3-204ENST00000478139 PREX2Q70Z35 1606 aa10.5□□□□□ -0.73
SYCP3-204ENST00000478139 HFM1A2PYH4 1435 aa10.5□□□□□ -0.73
SYCP3-204ENST00000478139 ATF3P18847 181 aa10.48□□□□□ -0.73
SYCP3-204ENST00000478139 MBD5Q9P267 1494 aa10.48□□□□□ -0.73
SYCP3-204ENST00000478139 ANP32EQ9BTT0 268 aa10.48□□□□□ -0.73
SYCP3-204ENST00000478139 FAM135AQ9P2D6 1515 aa10.48□□□□□ -0.73
SYCP3-204ENST00000478139 HECW2Q9P2P5 1572 aa10.48□□□□□ -0.73
SYCP3-204ENST00000478139 NAIPQ13075 1403 aa10.48□□□□□ -0.73
SYCP3-204ENST00000478139 SAMD9LQ8IVG5 1584 aa10.48□□□□□ -0.73
SYCP3-204ENST00000478139 TMC1Q8TDI8 760 aa10.47□□□□□ -0.73
SYCP3-204ENST00000478139 TCOF1Q13428 1488 aaKnown RBP10.47□□□□□ -0.73
SYCP3-204ENST00000478139 SHANK2Q9UPX8 1470 aa10.47□□□□□ -0.73
SYCP3-204ENST00000478139 BCL11AQ9H165 835 aa10.47□□□□□ -0.73
SYCP3-204ENST00000478139 TAOK2Q9UL54 1235 aa10.46□□□□□ -0.73
SYCP3-204ENST00000478139 ARHGEF12Q9NZN5 1544 aa10.46□□□□□ -0.74
SYCP3-204ENST00000478139 SRPK2P78362 688 aaKnown RBP10.46□□□□□ -0.74
SYCP3-204ENST00000478139 NCKAP5LQ9HCH0 1330 aa10.45□□□□□ -0.74
SYCP3-204ENST00000478139 NUTM2FA1L443 756 aa10.45□□□□□ -0.74
SYCP3-204ENST00000478139 TRAK1Q9UPV9 953 aa10.45□□□□□ -0.74
SYCP3-204ENST00000478139 STAC3Q96MF2 364 aa10.45□□□□□ -0.74
SYCP3-204ENST00000478139 NEFLP07196 543 aa10.44□□□□□ -0.74
SYCP3-204ENST00000478139 PIP4K2BP78356 416 aa10.44□□□□□ -0.74
SYCP3-204ENST00000478139 ZBTB7CA1YPR0 619 aa10.44□□□□□ -0.74
SYCP3-204ENST00000478139 ANP32CO43423 234 aa10.44□□□□□ -0.74
SYCP3-204ENST00000478139 KDM4FA0A1W2PPD8 638 aa10.43□□□□□ -0.74
SYCP3-204ENST00000478139 RPGRIP1LQ68CZ1 1315 aa10.43□□□□□ -0.74
SYCP3-204ENST00000478139 CDCA8Q53HL2 280 aa10.43□□□□□ -0.74
SYCP3-204ENST00000478139 L3MBTL2Q969R5 705 aa10.43□□□□□ -0.74
SYCP3-204ENST00000478139 ARHGEF5Q12774 1597 aa10.43□□□□□ -0.74
SYCP3-204ENST00000478139 MAP3K4Q9Y6R4 1608 aa10.43□□□□□ -0.74
SYCP3-204ENST00000478139 CDC42BPAQ5VT25 1732 aa10.42□□□□□ -0.74
SYCP3-204ENST00000478139 EIF4G2P78344 907 aaKnown RBP eCLIP10.42□□□□□ -0.74
SYCP3-204ENST00000478139 PTPRKQ15262 1439 aa10.42□□□□□ -0.74
SYCP3-204ENST00000478139 UBAP1LF5GYI3 381 aa10.41□□□□□ -0.74
SYCP3-204ENST00000478139 DNMT1P26358 1616 aaKnown RBP10.4□□□□□ -0.74
SYCP3-204ENST00000478139 NGDNQ8NEJ9 315 aaKnown RBP10.4□□□□□ -0.74
SYCP3-204ENST00000478139 PAK3O75914 559 aaPredicted RBP10.4□□□□□ -0.74
SYCP3-204ENST00000478139 TOM1O60784 492 aa10.39□□□□□ -0.75
SYCP3-204ENST00000478139 TMEM132EQ6IEE7 984 aa10.39□□□□□ -0.75
SYCP3-204ENST00000478139 RBM19Q9Y4C8 960 aaKnown RBP10.39□□□□□ -0.75
SYCP3-204ENST00000478139 CCER2I3L3R5 266 aa10.39□□□□□ -0.75
SYCP3-204ENST00000478139 ROCK2O75116 1388 aaKnown RBP10.39□□□□□ -0.75
SYCP3-204ENST00000478139 ANKRD30BQ9BXX2 1392 aa10.39□□□□□ -0.75
SYCP3-204ENST00000478139 CDC42BPBQ9Y5S2 1711 aa10.38□□□□□ -0.75
SYCP3-204ENST00000478139 HOMEZQ8IX15 550 aa10.38□□□□□ -0.75
SYCP3-204ENST00000478139 CFAP70Q5T0N1 1121 aa10.38□□□□□ -0.75
SYCP3-204ENST00000478139 ARHGEF40Q8TER5 1519 aa10.38□□□□□ -0.75
SYCP3-204ENST00000478139 ADGRL2O95490 1459 aa10.37□□□□□ -0.75
SYCP3-204ENST00000478139 MINK1Q8N4C8 1332 aaPredicted RBP10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms