RNA–Protein interactions for RNA: ENST00000475614.6

CCDC30-208, Transcript of coiled-coil domain containing 30, humanhuman

TSL 2

Gene CCDC30, Length 1,001 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30-208ENST00000475614 DDX27Q96GQ7 796 aaKnown RBP11.37□□□□□ -0.59
CCDC30-208ENST00000475614 URB2Q14146 1524 aaKnown RBP11.35□□□□□ -0.59
CCDC30-208ENST00000475614 PTCD2Q8WV60 388 aaKnown RBP11.34□□□□□ -0.59
CCDC30-208ENST00000475614 ARHGAP33O14559 1287 aa11.33□□□□□ -0.6
CCDC30-208ENST00000475614 ABCC8Q09428 1581 aa11.33□□□□□ -0.6
CCDC30-208ENST00000475614 DNMBPQ6XZF7 1577 aa11.33□□□□□ -0.6
CCDC30-208ENST00000475614 TBC1D12O60347 775 aa11.32□□□□□ -0.6
CCDC30-208ENST00000475614 ADGRD1Q6QNK2 874 aa11.32□□□□□ -0.6
CCDC30-208ENST00000475614 CUX2O14529 1486 aa11.32□□□□□ -0.6
CCDC30-208ENST00000475614 TOPBP1Q92547 1522 aa11.3□□□□□ -0.6
CCDC30-208ENST00000475614 BIVM-ERCC5R4GMW8 1640 aa11.29□□□□□ -0.6
CCDC30-208ENST00000475614 PSDA5PKW4 1024 aaPredicted RBP11.29□□□□□ -0.6
CCDC30-208ENST00000475614 DMRTA1Q5VZB9 504 aa11.29□□□□□ -0.6
CCDC30-208ENST00000475614 CUX1P39880 1505 aa11.29□□□□□ -0.6
CCDC30-208ENST00000475614 PSEN2P49810 448 aa11.28□□□□□ -0.6
CCDC30-208ENST00000475614 OXER1Q8TDS5 423 aa11.28□□□□□ -0.6
CCDC30-208ENST00000475614 PLCB2Q00722 1185 aa11.26□□□□□ -0.61
CCDC30-208ENST00000475614 TOP2BQ02880 1626 aa11.26□□□□□ -0.61
CCDC30-208ENST00000475614 HRO43593 1189 aa11.25□□□□□ -0.61
CCDC30-208ENST00000475614 HCSTQ9UBK5 93 aa11.25□□□□□ -0.61
CCDC30-208ENST00000475614 SYNJ1O43426 1573 aa11.24□□□□□ -0.61
CCDC30-208ENST00000475614 UPF1Q92900 1129 aaKnown RBP eCLIP11.24□□□□□ -0.61
CCDC30-208ENST00000475614 WRNQ14191 1432 aaPredicted RBP eCLIP11.24□□□□□ -0.61
CCDC30-208ENST00000475614 TK2O00142 265 aa11.23□□□□□ -0.61
CCDC30-208ENST00000475614 CAMK2BQ13554 666 aa11.23□□□□□ -0.61
CCDC30-208ENST00000475614 PLA2G2EQ9NZK7 142 aa11.23□□□□□ -0.61
CCDC30-208ENST00000475614 TSHZ2Q9NRE2 1034 aa11.22□□□□□ -0.61
CCDC30-208ENST00000475614 TARBP1Q13395 1621 aaKnown RBP11.21□□□□□ -0.61
CCDC30-208ENST00000475614 POLA1P09884 1462 aaPredicted RBP11.21□□□□□ -0.61
CCDC30-208ENST00000475614 PPP4R3BQ5MIZ7 849 aa11.21□□□□□ -0.61
CCDC30-208ENST00000475614 WDR70Q9NW82 654 aa11.21□□□□□ -0.61
CCDC30-208ENST00000475614 WDR97A6NE52 1622 aa11.2□□□□□ -0.62
CCDC30-208ENST00000475614 FGD5Q6ZNL6 1462 aa11.2□□□□□ -0.62
CCDC30-208ENST00000475614 EMILIN3Q9NT22 766 aa11.19□□□□□ -0.62
CCDC30-208ENST00000475614 MAP3K9P80192 1104 aa11.18□□□□□ -0.62
CCDC30-208ENST00000475614 IFT140Q96RY7 1462 aa11.18□□□□□ -0.62
CCDC30-208ENST00000475614 KCNK17Q96T54 332 aa11.16□□□□□ -0.62
CCDC30-208ENST00000475614 E2F4Q16254 413 aa11.15□□□□□ -0.62
CCDC30-208ENST00000475614 EVI5O60447 810 aa11.14□□□□□ -0.63
CCDC30-208ENST00000475614 KCTD12Q96CX2 325 aaKnown RBP11.14□□□□□ -0.63
CCDC30-208ENST00000475614 RAD54L2Q9Y4B4 1467 aa11.13□□□□□ -0.63
CCDC30-208ENST00000475614 SOGA1O94964 1423 aa11.13□□□□□ -0.63
CCDC30-208ENST00000475614 ANO8Q9HCE9 1232 aaPredicted RBP11.13□□□□□ -0.63
CCDC30-208ENST00000475614 ABCA10Q8WWZ4 1543 aa11.13□□□□□ -0.63
CCDC30-208ENST00000475614 EIF4G3O43432 1585 aaKnown RBP11.11□□□□□ -0.63
CCDC30-208ENST00000475614 VPS9D1Q9Y2B5 631 aa11.11□□□□□ -0.63
CCDC30-208ENST00000475614 ZNF608Q9ULD9 1512 aaPredicted RBP11.1□□□□□ -0.63
CCDC30-208ENST00000475614 ABCA5Q8WWZ7 1642 aa11.1□□□□□ -0.63
CCDC30-208ENST00000475614 DPYSL4O14531 572 aa11.09□□□□□ -0.63
CCDC30-208ENST00000475614 ZNF454Q8N9F8 522 aa11.09□□□□□ -0.63
CCDC30-208ENST00000475614 ARIH1Q9Y4X5 557 aaPredicted RBP11.09□□□□□ -0.63
CCDC30-208ENST00000475614 PBRM1Q86U86 1689 aa11.08□□□□□ -0.64
CCDC30-208ENST00000475614 BCL2L12Q9HB09 334 aa11.07□□□□□ -0.64
CCDC30-208ENST00000475614 FOSBP53539 338 aa11.06□□□□□ -0.64
CCDC30-208ENST00000475614 HAP1P54257 671 aaPredicted RBP11.06□□□□□ -0.64
CCDC30-208ENST00000475614 JPH4Q96JJ6 628 aa11.06□□□□□ -0.64
CCDC30-208ENST00000475614 KCNH8Q96L42 1107 aa11.06□□□□□ -0.64
CCDC30-208ENST00000475614 STAC3Q96MF2 364 aa11.06□□□□□ -0.64
CCDC30-208ENST00000475614 SPDYE16A6NNV3 312 aaPredicted RBP11.05□□□□□ -0.64
CCDC30-208ENST00000475614 PDIA6Q15084 440 aa11.04□□□□□ -0.64
CCDC30-208ENST00000475614 AQRO60306 1485 aaKnown RBP eCLIP11.04□□□□□ -0.64
CCDC30-208ENST00000475614 SLC4A5Q9BY07 1137 aa11.03□□□□□ -0.64
CCDC30-208ENST00000475614 GAPVD1Q14C86 1478 aa11.03□□□□□ -0.64
CCDC30-208ENST00000475614 TDRD9Q8NDG6 1382 aaKnown RBP11.03□□□□□ -0.64
CCDC30-208ENST00000475614 BHMG1C9JSJ3 638 aaPredicted RBP11.02□□□□□ -0.65
CCDC30-208ENST00000475614 PTPN5P54829 565 aa11.02□□□□□ -0.65
CCDC30-208ENST00000475614 GRIN2BQ13224 1484 aa11□□□□□ -0.65
CCDC30-208ENST00000475614 ERICH3Q5RHP9 1530 aa11□□□□□ -0.65
CCDC30-208ENST00000475614 P3H3Q8IVL6 736 aa11□□□□□ -0.65
CCDC30-208ENST00000475614 ZDHHC16Q969W1 377 aa11□□□□□ -0.65
CCDC30-208ENST00000475614 ZBED2Q9BTP6 218 aa11□□□□□ -0.65
CCDC30-208ENST00000475614 PHF14O94880 888 aa10.99□□□□□ -0.65
CCDC30-208ENST00000475614 KIF27Q86VH2 1401 aa10.99□□□□□ -0.65
CCDC30-208ENST00000475614 MAGI1Q96QZ7 1491 aaPredicted RBP10.99□□□□□ -0.65
CCDC30-208ENST00000475614 PTPREP23469 700 aa10.98□□□□□ -0.65
CCDC30-208ENST00000475614 ARHGEF1Q92888 912 aaKnown RBP10.98□□□□□ -0.65
CCDC30-208ENST00000475614 FBXW7Q969H0 707 aa10.98□□□□□ -0.65
CCDC30-208ENST00000475614 CHD1O14646 1710 aa10.98□□□□□ -0.65
CCDC30-208ENST00000475614 THSD4Q6ZMP0 1018 aa10.97□□□□□ -0.65
CCDC30-208ENST00000475614 EPAS1Q99814 870 aa10.97□□□□□ -0.65
CCDC30-208ENST00000475614 ADAM33Q9BZ11 813 aa10.97□□□□□ -0.65
CCDC30-208ENST00000475614 PCDHGA10Q9Y5H3 936 aa10.97□□□□□ -0.65
CCDC30-208ENST00000475614 ADAMTS12P58397 1594 aa10.97□□□□□ -0.65
CCDC30-208ENST00000475614 CUL7Q14999 1698 aa10.96□□□□□ -0.65
CCDC30-208ENST00000475614 SNAPC4Q5SXM2 1469 aa10.96□□□□□ -0.65
CCDC30-208ENST00000475614 TYW1BQ6NUM6 668 aa10.96□□□□□ -0.65
CCDC30-208ENST00000475614 KCNV2Q8TDN2 545 aa10.96□□□□□ -0.65
CCDC30-208ENST00000475614 RUSC2Q8N2Y8 1516 aa10.94□□□□□ -0.66
CCDC30-208ENST00000475614 IGF1RP08069 1367 aa10.93□□□□□ -0.66
CCDC30-208ENST00000475614 VSIG10Q8N0Z9 540 aa10.93□□□□□ -0.66
CCDC30-208ENST00000475614 SYNJ2O15056 1496 aa10.93□□□□□ -0.66
CCDC30-208ENST00000475614 DDX12PQ92771 950 aa10.92□□□□□ -0.66
CCDC30-208ENST00000475614 WNT2BQ93097 391 aa10.92□□□□□ -0.66
CCDC30-208ENST00000475614 EEA1Q15075 1411 aa10.92□□□□□ -0.66
CCDC30-208ENST00000475614 MRPL50Q8N5N7 158 aaKnown RBP10.91□□□□□ -0.66
CCDC30-208ENST00000475614 FHAD1B1AJZ9 1412 aa10.91□□□□□ -0.66
CCDC30-208ENST00000475614 IFFO2Q5TF58 517 aa10.9□□□□□ -0.66
CCDC30-208ENST00000475614 GOLGA8CPA6NN73 597 aa10.89□□□□□ -0.67
CCDC30-208ENST00000475614 KDM2AQ9Y2K7 1162 aa10.89□□□□□ -0.67
CCDC30-208ENST00000475614 NBR1Q14596 966 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms