RNA–Protein interactions for RNA: ENST00000474539.5

CCNL1-215, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 4,799 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-215ENST00000474539 OS9Q13438 667 aaPredicted RBP5.91□□□□□ -1.46
CCNL1-215ENST00000474539 GPATCH3Q96I76 525 aa5.91□□□□□ -1.46
CCNL1-215ENST00000474539 KIF15Q9NS87 1388 aa5.91□□□□□ -1.46
CCNL1-215ENST00000474539 SMG6Q86US8 1419 aaKnown RBP5.91□□□□□ -1.46
CCNL1-215ENST00000474539 DENND4BO75064 1496 aaPredicted RBP5.9□□□□□ -1.46
CCNL1-215ENST00000474539 U2SURPO15042 1029 aaKnown RBP5.9□□□□□ -1.46
CCNL1-215ENST00000474539 CNTLNQ9NXG0 1405 aa5.9□□□□□ -1.46
CCNL1-215ENST00000474539 MCCP23508 829 aa5.9□□□□□ -1.47
CCNL1-215ENST00000474539 EPRSP07814 1512 aaKnown RBP5.9□□□□□ -1.47
CCNL1-215ENST00000474539 HNRNPUQ00839 825 aaKnown RBP eCLIP5.9□□□□□ -1.47
CCNL1-215ENST00000474539 BECN1Q14457 450 aa5.9□□□□□ -1.47
CCNL1-215ENST00000474539 PROSER2Q86WR7 435 aaPredicted RBP5.9□□□□□ -1.47
CCNL1-215ENST00000474539 STK26Q9P289 416 aa5.9□□□□□ -1.47
CCNL1-215ENST00000474539 ANKRD30BQ9BXX2 1392 aa5.89□□□□□ -1.47
CCNL1-215ENST00000474539 HMMRO75330 724 aa5.89□□□□□ -1.47
CCNL1-215ENST00000474539 GTF2E1P29083 439 aaPredicted RBP5.89□□□□□ -1.47
CCNL1-215ENST00000474539 ZRSR1Q15695 479 aaKnown RBP5.89□□□□□ -1.47
CCNL1-215ENST00000474539 ZNF692Q9BU19 519 aaPredicted RBP5.89□□□□□ -1.47
CCNL1-215ENST00000474539 C11orf95C9JLR9 678 aaPredicted RBP5.89□□□□□ -1.47
CCNL1-215ENST00000474539 CCDC34Q96HJ3 373 aa5.89□□□□□ -1.47
CCNL1-215ENST00000474539 NESP48681 1621 aa5.88□□□□□ -1.47
CCNL1-215ENST00000474539 GOLGA6L22H0YM25 854 aa5.88□□□□□ -1.47
CCNL1-215ENST00000474539 HSP90AB1P08238 724 aaKnown RBP5.88□□□□□ -1.47
CCNL1-215ENST00000474539 AMOTL1Q8IY63 956 aa5.88□□□□□ -1.47
CCNL1-215ENST00000474539 FAM9BQ8IZU0 186 aa5.88□□□□□ -1.47
CCNL1-215ENST00000474539 TTC5Q8N0Z6 440 aa5.88□□□□□ -1.47
CCNL1-215ENST00000474539 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.88□□□□□ -1.47
CCNL1-215ENST00000474539 TXNDC2Q86VQ3 553 aa5.88□□□□□ -1.47
CCNL1-215ENST00000474539 KIF14Q15058 1648 aa5.88□□□□□ -1.47
CCNL1-215ENST00000474539 DDRGK1Q96HY6 314 aa5.87□□□□□ -1.47
CCNL1-215ENST00000474539 NOL10Q9BSC4 688 aaKnown RBP5.87□□□□□ -1.47
CCNL1-215ENST00000474539 ANKRD50Q9ULJ7 1429 aa5.87□□□□□ -1.47
CCNL1-215ENST00000474539 DDX58O95786 925 aaKnown RBP5.87□□□□□ -1.47
CCNL1-215ENST00000474539 DDX10Q13206 875 aaKnown RBP5.87□□□□□ -1.47
CCNL1-215ENST00000474539 TAF7LQ5H9L4 462 aa5.87□□□□□ -1.47
CCNL1-215ENST00000474539 TOM1O60784 492 aa5.87□□□□□ -1.47
CCNL1-215ENST00000474539 FANCAO15360 1455 aa5.87□□□□□ -1.47
CCNL1-215ENST00000474539 RAPGEF4Q8WZA2 1011 aa5.87□□□□□ -1.47
CCNL1-215ENST00000474539 CCDC141Q6ZP82 1450 aa5.86□□□□□ -1.47
CCNL1-215ENST00000474539 FGD6Q6ZV73 1430 aa5.86□□□□□ -1.47
CCNL1-215ENST00000474539 L1TD1Q5T7N2 865 aaKnown RBP5.86□□□□□ -1.47
CCNL1-215ENST00000474539 THOC2Q8NI27 1593 aaKnown RBP5.86□□□□□ -1.47
CCNL1-215ENST00000474539 NEXNQ0ZGT2 675 aa5.85□□□□□ -1.47
CCNL1-215ENST00000474539 PDE3BQ13370 1112 aa5.85□□□□□ -1.47
CCNL1-215ENST00000474539 HTATSF1O43719 755 aaKnown RBP5.85□□□□□ -1.47
CCNL1-215ENST00000474539 CCDC136Q96JN2 1154 aa5.85□□□□□ -1.47
CCNL1-215ENST00000474539 CCER2I3L3R5 266 aa5.85□□□□□ -1.47
CCNL1-215ENST00000474539 TEFQ10587 303 aa5.85□□□□□ -1.47
CCNL1-215ENST00000474539 NLRP13Q86W25 1043 aa5.85□□□□□ -1.47
CCNL1-215ENST00000474539 PNISRQ8TF01 805 aaKnown RBP5.85□□□□□ -1.47
CCNL1-215ENST00000474539 CENPJQ9HC77 1338 aaPredicted RBP5.85□□□□□ -1.47
CCNL1-215ENST00000474539 PLEKHG5O94827 1062 aa5.84□□□□□ -1.47
CCNL1-215ENST00000474539 PRXQ9BXM0 1461 aa5.84□□□□□ -1.47
CCNL1-215ENST00000474539 ADGRL1O94910 1474 aa5.84□□□□□ -1.47
CCNL1-215ENST00000474539 KCNH5Q8NCM2 988 aa5.84□□□□□ -1.47
CCNL1-215ENST00000474539 MAP3K1Q13233 1512 aa5.84□□□□□ -1.47
CCNL1-215ENST00000474539 NRDCO43847 1150 aa5.84□□□□□ -1.48
CCNL1-215ENST00000474539 WDHD1O75717 1129 aaPredicted RBP5.84□□□□□ -1.48
CCNL1-215ENST00000474539 KIF3AQ9Y496 699 aa5.84□□□□□ -1.48
CCNL1-215ENST00000474539 C9orf84Q5VXU9 1444 aa5.84□□□□□ -1.48
CCNL1-215ENST00000474539 SUPT6HQ7KZ85 1726 aaKnown RBP5.84□□□□□ -1.48
CCNL1-215ENST00000474539 WDR62O43379 1518 aa5.84□□□□□ -1.48
CCNL1-215ENST00000474539 GOLGA6L6A8MZA4 724 aa5.83□□□□□ -1.48
CCNL1-215ENST00000474539 FGD1P98174 961 aa5.83□□□□□ -1.48
CCNL1-215ENST00000474539 GORABQ5T7V8 394 aa5.83□□□□□ -1.48
CCNL1-215ENST00000474539 LAS1LQ9Y4W2 734 aaKnown RBP5.83□□□□□ -1.48
CCNL1-215ENST00000474539 ATAD2Q6PL18 1390 aa5.83□□□□□ -1.48
CCNL1-215ENST00000474539 LRRC9Q6ZRR7 1453 aa5.83□□□□□ -1.48
CCNL1-215ENST00000474539 KCNJ4P48050 445 aa5.83□□□□□ -1.48
CCNL1-215ENST00000474539 AAMPQ13685 434 aa5.83□□□□□ -1.48
CCNL1-215ENST00000474539 FAM135AQ9P2D6 1515 aa5.82□□□□□ -1.48
CCNL1-215ENST00000474539 PTMSP20962 102 aa5.82□□□□□ -1.48
CCNL1-215ENST00000474539 ERICH6BQ5W0A0 696 aa5.82□□□□□ -1.48
CCNL1-215ENST00000474539 RAB3GAP2Q9H2M9 1393 aa5.82□□□□□ -1.48
CCNL1-215ENST00000474539 CFAP74Q9C0B2 1584 aa5.82□□□□□ -1.48
CCNL1-215ENST00000474539 U2AF1L5P0DN76 240 aaPredicted RBP5.82□□□□□ -1.48
CCNL1-215ENST00000474539 U2AF1Q01081 240 aaKnown RBP eCLIP5.82□□□□□ -1.481e-18■■■■□ 26.7
CCNL1-215ENST00000474539 CADPS2Q86UW7 1296 aa5.82□□□□□ -1.48
CCNL1-215ENST00000474539 CCDC7Q96M83 1385 aa5.82□□□□□ -1.48
CCNL1-215ENST00000474539 PLEKHO1Q53GL0 409 aaPredicted RBP5.82□□□□□ -1.48
CCNL1-215ENST00000474539 KIAA1211Q6ZU35 1233 aa5.82□□□□□ -1.48
CCNL1-215ENST00000474539 TRIM34Q9BYJ4 488 aa5.82□□□□□ -1.48
CCNL1-215ENST00000474539 GAS2L2Q8NHY3 880 aa5.82□□□□□ -1.48
CCNL1-215ENST00000474539 HSP90AB4PQ58FF6 505 aa5.81□□□□□ -1.48
CCNL1-215ENST00000474539 TATP17735 454 aaPredicted RBP5.81□□□□□ -1.48
CCNL1-215ENST00000474539 SPG7Q9UQ90 795 aa5.81□□□□□ -1.48
CCNL1-215ENST00000474539 CTDP1Q9Y5B0 961 aaPredicted RBP5.81□□□□□ -1.48
CCNL1-215ENST00000474539 URB2Q14146 1524 aaKnown RBP5.81□□□□□ -1.48
CCNL1-215ENST00000474539 BIVM-ERCC5R4GMW8 1640 aa5.81□□□□□ -1.48
CCNL1-215ENST00000474539 MSH5O43196 834 aa5.8□□□□□ -1.48
CCNL1-215ENST00000474539 SAFB2Q14151 953 aaKnown RBP eCLIP5.8□□□□□ -1.48
CCNL1-215ENST00000474539 ZNF518AQ6AHZ1 1483 aa5.8□□□□□ -1.48
CCNL1-215ENST00000474539 MSH6P52701 1360 aa5.8□□□□□ -1.48
CCNL1-215ENST00000474539 NINLQ9Y2I6 1382 aa5.8□□□□□ -1.48
CCNL1-215ENST00000474539 BCL11AQ9H165 835 aa5.8□□□□□ -1.48
CCNL1-215ENST00000474539 WDR7Q9Y4E6 1490 aa5.8□□□□□ -1.48
CCNL1-215ENST00000474539 TRAK1Q9UPV9 953 aa5.79□□□□□ -1.48
CCNL1-215ENST00000474539 PMFBP1Q8TBY8 1022 aa5.79□□□□□ -1.48
CCNL1-215ENST00000474539 ABCC10Q5T3U5 1492 aa5.79□□□□□ -1.48
CCNL1-215ENST00000474539 KIAA1107Q9UPP5 1409 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms