RNA–Protein interactions for RNA: ENST00000473007.7

UBE2D4-210, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 5

Gene UBE2D4, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-210ENST00000473007 PSEN1P49768 467 aa6.35□□□□□ -1.39
UBE2D4-210ENST00000473007 MAP2K5Q13163 448 aa6.35□□□□□ -1.39
UBE2D4-210ENST00000473007 CYB5RLQ6IPT4 315 aa6.35□□□□□ -1.39
UBE2D4-210ENST00000473007 PCDHB8Q9UN66 801 aa6.35□□□□□ -1.39
UBE2D4-210ENST00000473007 PCDHB13Q9Y5F0 798 aa6.35□□□□□ -1.39
UBE2D4-210ENST00000473007 FGD5Q6ZNL6 1462 aa6.34□□□□□ -1.39
UBE2D4-210ENST00000473007 PHF8Q9UPP1 1060 aa6.34□□□□□ -1.39
UBE2D4-210ENST00000473007 RIMBP3CA6NJZ7 1639 aa6.34□□□□□ -1.39
UBE2D4-210ENST00000473007 RIMBP3BA6NNM3 1639 aa6.34□□□□□ -1.39
UBE2D4-210ENST00000473007 RIMBP3Q9UFD9 1639 aa6.34□□□□□ -1.39
UBE2D4-210ENST00000473007 EIF4G3O43432 1585 aaKnown RBP6.34□□□□□ -1.39
UBE2D4-210ENST00000473007 ERICH3Q5RHP9 1530 aa6.34□□□□□ -1.39
UBE2D4-210ENST00000473007 PBRM1Q86U86 1689 aa6.33□□□□□ -1.4
UBE2D4-210ENST00000473007 SOX12O15370 315 aa6.33□□□□□ -1.4
UBE2D4-210ENST00000473007 PPP1R15AO75807 674 aaPredicted RBP6.33□□□□□ -1.4
UBE2D4-210ENST00000473007 EFCAB3Q8N7B9 438 aa6.33□□□□□ -1.4
UBE2D4-210ENST00000473007 PATL2C9JE40 543 aaKnown RBP6.32□□□□□ -1.4
UBE2D4-210ENST00000473007 PDE4CQ08493 712 aa6.32□□□□□ -1.4
UBE2D4-210ENST00000473007 AMOTL2Q9Y2J4 779 aa6.32□□□□□ -1.4
UBE2D4-210ENST00000473007 MAGI1Q96QZ7 1491 aaPredicted RBP6.32□□□□□ -1.4
UBE2D4-210ENST00000473007 CUL7Q14999 1698 aa6.32□□□□□ -1.4
UBE2D4-210ENST00000473007 ACIN1Q9UKV3 1341 aaKnown RBP6.31□□□□□ -1.4
UBE2D4-210ENST00000473007 USP35Q9P2H5 1018 aa6.31□□□□□ -1.4
UBE2D4-210ENST00000473007 SOGA1O94964 1423 aa6.31□□□□□ -1.4
UBE2D4-210ENST00000473007 SPDYE16A6NNV3 312 aaPredicted RBP6.3□□□□□ -1.4
UBE2D4-210ENST00000473007 MS4A1P11836 297 aa6.3□□□□□ -1.4
UBE2D4-210ENST00000473007 SH3D19Q5HYK7 790 aa6.3□□□□□ -1.4
UBE2D4-210ENST00000473007 SPDYE1Q8NFV5 336 aaPredicted RBP6.3□□□□□ -1.4
UBE2D4-210ENST00000473007 PRR29P0C7W0 189 aa6.29□□□□□ -1.4
UBE2D4-210ENST00000473007 KCNA1Q09470 495 aa6.29□□□□□ -1.4
UBE2D4-210ENST00000473007 TTLL12Q14166 644 aaPredicted RBP6.29□□□□□ -1.4
UBE2D4-210ENST00000473007 COG6Q9Y2V7 657 aa6.29□□□□□ -1.4
UBE2D4-210ENST00000473007 GRIN2BQ13224 1484 aa6.28□□□□□ -1.4
UBE2D4-210ENST00000473007 GAPVD1Q14C86 1478 aa6.28□□□□□ -1.4
UBE2D4-210ENST00000473007 EEA1Q15075 1411 aa6.28□□□□□ -1.4
UBE2D4-210ENST00000473007 OXER1Q8TDS5 423 aa6.28□□□□□ -1.4
UBE2D4-210ENST00000473007 RBM42Q9BTD8 480 aaKnown RBP6.28□□□□□ -1.4
UBE2D4-210ENST00000473007 ZNF330Q9Y3S2 320 aaPredicted RBP6.28□□□□□ -1.4
UBE2D4-210ENST00000473007 DPYSL4O14531 572 aa6.27□□□□□ -1.41
UBE2D4-210ENST00000473007 PDIA6Q15084 440 aa6.27□□□□□ -1.41
UBE2D4-210ENST00000473007 SKIV2LQ15477 1246 aaKnown RBP6.27□□□□□ -1.41
UBE2D4-210ENST00000473007 RSPH4AQ5TD94 716 aa6.27□□□□□ -1.41
UBE2D4-210ENST00000473007 GIGYF2Q6Y7W6 1299 aaKnown RBP6.27□□□□□ -1.41
UBE2D4-210ENST00000473007 ZNF579Q8NAF0 562 aaKnown RBP6.27□□□□□ -1.41
UBE2D4-210ENST00000473007 KIF27Q86VH2 1401 aa6.26□□□□□ -1.41
UBE2D4-210ENST00000473007 ARHGEF11O15085 1522 aa6.26□□□□□ -1.41
UBE2D4-210ENST00000473007 CHD1O14646 1710 aa6.26□□□□□ -1.41
UBE2D4-210ENST00000473007 NUTM2FA1L443 756 aa6.26□□□□□ -1.41
UBE2D4-210ENST00000473007 SPDYE5A6NIY4 337 aa6.26□□□□□ -1.41
UBE2D4-210ENST00000473007 GNPATO15228 680 aa6.26□□□□□ -1.41
UBE2D4-210ENST00000473007 BRD1O95696 1058 aa6.26□□□□□ -1.41
UBE2D4-210ENST00000473007 CABP2Q9NPB3 220 aa6.26□□□□□ -1.41
UBE2D4-210ENST00000473007 SYNJ2O15056 1496 aa6.26□□□□□ -1.41
UBE2D4-210ENST00000473007 ADAMTS12P58397 1594 aa6.26□□□□□ -1.41
UBE2D4-210ENST00000473007 ZNF608Q9ULD9 1512 aaPredicted RBP6.25□□□□□ -1.41
UBE2D4-210ENST00000473007 FECHP22830 423 aa6.25□□□□□ -1.41
UBE2D4-210ENST00000473007 REPIN1Q9BWE0 567 aaKnown RBP6.25□□□□□ -1.41
UBE2D4-210ENST00000473007 TSPYL2Q9H2G4 693 aaPredicted RBP6.25□□□□□ -1.41
UBE2D4-210ENST00000473007 RAD54L2Q9Y4B4 1467 aa6.24□□□□□ -1.41
UBE2D4-210ENST00000473007 PPP1R15BQ5SWA1 713 aa6.24□□□□□ -1.41
UBE2D4-210ENST00000473007 MS4A4AQ96JQ5 239 aa6.24□□□□□ -1.41
UBE2D4-210ENST00000473007 CHMP4AQ9BY43 222 aa6.24□□□□□ -1.41
UBE2D4-210ENST00000473007 EMILIN3Q9NT22 766 aa6.24□□□□□ -1.41
UBE2D4-210ENST00000473007 HIC1Q14526 733 aa6.23□□□□□ -1.41
UBE2D4-210ENST00000473007 CCDC27Q2M243 656 aa6.23□□□□□ -1.41
UBE2D4-210ENST00000473007 PROCA1Q8NCQ7 364 aaPredicted RBP6.23□□□□□ -1.41
UBE2D4-210ENST00000473007 CLEC11AQ9Y240 323 aa6.23□□□□□ -1.41
UBE2D4-210ENST00000473007 FHAD1B1AJZ9 1412 aa6.23□□□□□ -1.41
UBE2D4-210ENST00000473007 FAM177A1Q8N128 213 aaPredicted RBP6.22□□□□□ -1.41
UBE2D4-210ENST00000473007 AQRO60306 1485 aaKnown RBP eCLIP6.22□□□□□ -1.41
UBE2D4-210ENST00000473007 SHROOM2Q13796 1616 aa6.21□□□□□ -1.41
UBE2D4-210ENST00000473007 CALR3Q96L12 384 aaKnown RBP6.21□□□□□ -1.42
UBE2D4-210ENST00000473007 SNRKQ9NRH2 765 aa6.21□□□□□ -1.42
UBE2D4-210ENST00000473007 IGSF5Q9NSI5 407 aa6.21□□□□□ -1.42
UBE2D4-210ENST00000473007 USTQ9Y2C2 406 aa6.21□□□□□ -1.42
UBE2D4-210ENST00000473007 GRIN2AQ12879 1464 aa6.21□□□□□ -1.42
UBE2D4-210ENST00000473007 CTTNBP2Q8WZ74 1663 aa6.2□□□□□ -1.42
UBE2D4-210ENST00000473007 NUP160Q12769 1436 aa6.2□□□□□ -1.42
UBE2D4-210ENST00000473007 FCHSD2O94868 740 aa6.2□□□□□ -1.42
UBE2D4-210ENST00000473007 BANK1Q8NDB2 785 aa6.2□□□□□ -1.42
UBE2D4-210ENST00000473007 TMUB1Q9BVT8 246 aa6.2□□□□□ -1.42
UBE2D4-210ENST00000473007 KIF21BO75037 1637 aa6.2□□□□□ -1.42
UBE2D4-210ENST00000473007 SNAPC4Q5SXM2 1469 aa6.2□□□□□ -1.42
UBE2D4-210ENST00000473007 CLASP1Q7Z460 1538 aa6.2□□□□□ -1.42
UBE2D4-210ENST00000473007 TDRD9Q8NDG6 1382 aaKnown RBP6.19□□□□□ -1.42
UBE2D4-210ENST00000473007 GRXCR2A6NFK2 248 aa6.19□□□□□ -1.42
UBE2D4-210ENST00000473007 UNCXA6NJT0 531 aa6.19□□□□□ -1.42
UBE2D4-210ENST00000473007 SND1Q7KZF4 910 aaKnown RBP eCLIP6.19□□□□□ -1.42
UBE2D4-210ENST00000473007 GPHNQ9NQX3 736 aaPredicted RBP6.19□□□□□ -1.42
UBE2D4-210ENST00000473007 ATP1B4Q9UN42 357 aaPredicted RBP6.19□□□□□ -1.42
UBE2D4-210ENST00000473007 IGF1RP08069 1367 aa6.18□□□□□ -1.42
UBE2D4-210ENST00000473007 PRXQ9BXM0 1461 aa6.18□□□□□ -1.42
UBE2D4-210ENST00000473007 PBXIP1Q96AQ6 731 aa6.18□□□□□ -1.42
UBE2D4-210ENST00000473007 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.18□□□□□ -1.42
UBE2D4-210ENST00000473007 MYT1LQ9UL68 1186 aa6.18□□□□□ -1.42
UBE2D4-210ENST00000473007 IVNS1ABPQ9Y6Y0 642 aa6.18□□□□□ -1.42
UBE2D4-210ENST00000473007 RUSC2Q8N2Y8 1516 aa6.18□□□□□ -1.42
UBE2D4-210ENST00000473007 OSBPP22059 807 aa6.17□□□□□ -1.42
UBE2D4-210ENST00000473007 IFNL1Q8IU54 200 aa6.17□□□□□ -1.42
UBE2D4-210ENST00000473007 POLR3EQ9NVU0 708 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms