RNA–Protein interactions for RNA: ENST00000471779.1

DMD-219, Transcript of dystrophin, humanhuman

TSL 1 (best)

Gene DMD, Length 362 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-219ENST00000471779 RNF25Q96BH1 459 aaPredicted RBP4.93□□□□□ -1.62
DMD-219ENST00000471779 PLPP6Q8IY26 295 aa4.92□□□□□ -1.62
DMD-219ENST00000471779 TRIM41Q8WV44 630 aa4.92□□□□□ -1.62
DMD-219ENST00000471779 MYT1Q01538 1121 aa4.91□□□□□ -1.62
DMD-219ENST00000471779 PPP1R18Q6NYC8 613 aa4.91□□□□□ -1.62
DMD-219ENST00000471779 NCAPD3P42695 1498 aa4.91□□□□□ -1.62
DMD-219ENST00000471779 SMARCA2P51531 1590 aa4.91□□□□□ -1.62
DMD-219ENST00000471779 ATAD2BQ9ULI0 1458 aa4.9□□□□□ -1.62
DMD-219ENST00000471779 SUZ12Q15022 739 aaKnown RBP4.9□□□□□ -1.63
DMD-219ENST00000471779 PROX2Q3B8N5 592 aa4.9□□□□□ -1.63
DMD-219ENST00000471779 PKDCCQ504Y2 493 aa4.9□□□□□ -1.63
DMD-219ENST00000471779 IFNLR1Q8IU57 520 aaPredicted RBP4.9□□□□□ -1.63
DMD-219ENST00000471779 BCL11BQ9C0K0 894 aaPredicted RBP4.9□□□□□ -1.63
DMD-219ENST00000471779 MROH2BQ7Z745 1585 aa4.9□□□□□ -1.63
DMD-219ENST00000471779 SMARCA4P51532 1647 aa4.9□□□□□ -1.63
DMD-219ENST00000471779 RSF1Q96T23 1441 aaPredicted RBP4.89□□□□□ -1.63
DMD-219ENST00000471779 WFS1O76024 890 aa4.89□□□□□ -1.63
DMD-219ENST00000471779 FOSBP53539 338 aa4.89□□□□□ -1.63
DMD-219ENST00000471779 RABGEF1Q9UJ41 708 aa4.89□□□□□ -1.63
DMD-219ENST00000471779 BAZ1BQ9UIG0 1483 aaKnown RBP4.88□□□□□ -1.63
DMD-219ENST00000471779 FOXK1P85037 733 aa4.88□□□□□ -1.63
DMD-219ENST00000471779 INSM1Q01101 510 aaPredicted RBP4.88□□□□□ -1.63
DMD-219ENST00000471779 UPF1Q92900 1129 aaKnown RBP eCLIP4.88□□□□□ -1.63
DMD-219ENST00000471779 ZFRQ96KR1 1074 aaKnown RBP4.88□□□□□ -1.63
DMD-219ENST00000471779 ADAM33Q9BZ11 813 aa4.88□□□□□ -1.63
DMD-219ENST00000471779 HPS5Q9UPZ3 1129 aa4.87□□□□□ -1.63
DMD-219ENST00000471779 STK24Q9Y6E0 443 aa4.87□□□□□ -1.63
DMD-219ENST00000471779 DSG2Q14126 1118 aa4.85□□□□□ -1.63
DMD-219ENST00000471779 LAPTM4BQ86VI4 370 aa4.85□□□□□ -1.63
DMD-219ENST00000471779 EIF4ENIF1Q9NRA8 985 aaKnown RBP4.85□□□□□ -1.63
DMD-219ENST00000471779 SEPT9Q9UHD8 586 aaPredicted RBP4.85□□□□□ -1.63
DMD-219ENST00000471779 TSR3Q9UJK0 312 aaKnown RBP4.85□□□□□ -1.63
DMD-219ENST00000471779 WIZO95785 1651 aa4.84□□□□□ -1.63
DMD-219ENST00000471779 WIPF1O43516 503 aa4.84□□□□□ -1.63
DMD-219ENST00000471779 TJAP1Q5JTD0 557 aa4.84□□□□□ -1.63
DMD-219ENST00000471779 TRIM67Q6ZTA4 783 aa4.84□□□□□ -1.63
DMD-219ENST00000471779 ZDHHC16Q969W1 377 aa4.84□□□□□ -1.63
DMD-219ENST00000471779 HMGXB3Q12766 1538 aa4.83□□□□□ -1.64
DMD-219ENST00000471779 PPP1R3GB7ZBB8 358 aa4.83□□□□□ -1.64
DMD-219ENST00000471779 ST8SIA5O15466 376 aa4.83□□□□□ -1.64
DMD-219ENST00000471779 PPP1R37O75864 691 aa4.83□□□□□ -1.64
DMD-219ENST00000471779 DGAT1O75907 488 aa4.83□□□□□ -1.64
DMD-219ENST00000471779 OXER1Q8TDS5 423 aa4.83□□□□□ -1.64
DMD-219ENST00000471779 JPH4Q96JJ6 628 aa4.83□□□□□ -1.64
DMD-219ENST00000471779 CDKN2AIPQ9NXV6 580 aaPredicted RBP4.83□□□□□ -1.64
DMD-219ENST00000471779 KIAA1468Q9P260 1216 aa4.83□□□□□ -1.64
DMD-219ENST00000471779 PEG3Q9GZU2 1588 aa4.82□□□□□ -1.64
DMD-219ENST00000471779 COL9A1P20849 921 aa4.82□□□□□ -1.64
DMD-219ENST00000471779 LRCH3Q96II8 777 aa4.82□□□□□ -1.64
DMD-219ENST00000471779 CADPSQ9ULU8 1353 aa4.81□□□□□ -1.64
DMD-219ENST00000471779 FAM187AA6NFU0 413 aa4.81□□□□□ -1.64
DMD-219ENST00000471779 NFX1Q12986 1120 aaKnown RBP4.81□□□□□ -1.64
DMD-219ENST00000471779 MTRQ99707 1265 aa4.81□□□□□ -1.64
DMD-219ENST00000471779 GPHNQ9NQX3 736 aaPredicted RBP4.81□□□□□ -1.64
DMD-219ENST00000471779 PDS5BQ9NTI5 1447 aa4.8□□□□□ -1.64
DMD-219ENST00000471779 ZNF516Q92618 1163 aa4.79□□□□□ -1.64
DMD-219ENST00000471779 IL21Q9HBE4 155 aa4.79□□□□□ -1.64
DMD-219ENST00000471779 AAASQ9NRG9 546 aa4.79□□□□□ -1.64
DMD-219ENST00000471779 ERCC6Q03468 1493 aa4.79□□□□□ -1.64
DMD-219ENST00000471779 TOP2AP11388 1531 aaKnown RBP4.78□□□□□ -1.64
DMD-219ENST00000471779 CCDC88BA6NC98 1476 aa4.78□□□□□ -1.64
DMD-219ENST00000471779 STK25O00506 426 aa4.78□□□□□ -1.64
DMD-219ENST00000471779 PPP4CP60510 307 aa4.78□□□□□ -1.64
DMD-219ENST00000471779 LCE2CQ5TA81 110 aa4.78□□□□□ -1.64
DMD-219ENST00000471779 FAM98CQ17RN3 349 aaKnown RBP4.77□□□□□ -1.65
DMD-219ENST00000471779 NKX2-3Q8TAU0 364 aa4.77□□□□□ -1.65
DMD-219ENST00000471779 EVI5O60447 810 aa4.75□□□□□ -1.65
DMD-219ENST00000471779 DACH1Q9UI36 760 aa4.75□□□□□ -1.65
DMD-219ENST00000471779 NESP48681 1621 aa4.75□□□□□ -1.65
DMD-219ENST00000471779 LAMC3Q9Y6N6 1575 aa4.74□□□□□ -1.65
DMD-219ENST00000471779 FAM181BA6NEQ2 426 aa4.74□□□□□ -1.65
DMD-219ENST00000471779 C11orf95C9JLR9 678 aaPredicted RBP4.74□□□□□ -1.65
DMD-219ENST00000471779 TNFRSF10AO00220 468 aa4.74□□□□□ -1.65
DMD-219ENST00000471779 GGCXP38435 758 aa4.74□□□□□ -1.65
DMD-219ENST00000471779 SLC19A1P41440 591 aa4.74□□□□□ -1.65
DMD-219ENST00000471779 ANO8Q9HCE9 1232 aaPredicted RBP4.74□□□□□ -1.65
DMD-219ENST00000471779 GMPR2Q9P2T1 348 aaKnown RBP4.74□□□□□ -1.65
DMD-219ENST00000471779 TAOK2Q9UL54 1235 aa4.74□□□□□ -1.65
DMD-219ENST00000471779 CFTRP13569 1480 aa4.74□□□□□ -1.65
DMD-219ENST00000471779 PRR20EP86478 221 aa4.73□□□□□ -1.65
DMD-219ENST00000471779 PRR20CP86479 221 aa4.73□□□□□ -1.65
DMD-219ENST00000471779 PRR20DP86480 221 aa4.73□□□□□ -1.65
DMD-219ENST00000471779 PRR20BP86481 221 aa4.73□□□□□ -1.65
DMD-219ENST00000471779 PRR20AP86496 221 aa4.73□□□□□ -1.65
DMD-219ENST00000471779 EMID1Q96A84 441 aaPredicted RBP4.72□□□□□ -1.65
DMD-219ENST00000471779 PCDHGA10Q9Y5H3 936 aa4.72□□□□□ -1.65
DMD-219ENST00000471779 FANCD2Q9BXW9 1451 aa4.71□□□□□ -1.66
DMD-219ENST00000471779 TRIM6-TRIM34B2RNG4 842 aa4.71□□□□□ -1.66
DMD-219ENST00000471779 SPRYD7Q5W111 196 aa4.71□□□□□ -1.66
DMD-219ENST00000471779 CEP164Q9UPV0 1460 aa4.7□□□□□ -1.66
DMD-219ENST00000471779 ONECUT3O60422 494 aaPredicted RBP4.7□□□□□ -1.66
DMD-219ENST00000471779 ZNF598Q86UK7 904 aaKnown RBP4.7□□□□□ -1.66
DMD-219ENST00000471779 ABCC8Q09428 1581 aa4.7□□□□□ -1.66
DMD-219ENST00000471779 ZNF697Q5TEC3 545 aa4.69□□□□□ -1.66
DMD-219ENST00000471779 SAMD7Q7Z3H4 446 aa4.69□□□□□ -1.66
DMD-219ENST00000471779 TMUB1Q9BVT8 246 aa4.69□□□□□ -1.66
DMD-219ENST00000471779 TERTO14746 1132 aaKnown RBP4.68□□□□□ -1.66
DMD-219ENST00000471779 GDF9O60383 454 aa4.68□□□□□ -1.66
DMD-219ENST00000471779 PRKCSHP14314 528 aaPredicted RBP4.68□□□□□ -1.66
DMD-219ENST00000471779 COPS2P61201 443 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 111 ms