RNA–Protein interactions for RNA: ENST00000467141.1

MSL3-209, Transcript of MSL complex subunit 3, humanhuman

TSL 3

Gene MSL3, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-209ENST00000467141 HPS5Q9UPZ3 1129 aa8.34□□□□□ -1.07
MSL3-209ENST00000467141 ADAM33Q9BZ11 813 aa8.32□□□□□ -1.08
MSL3-209ENST00000467141 TJAP1Q5JTD0 557 aa8.31□□□□□ -1.08
MSL3-209ENST00000467141 RNF25Q96BH1 459 aaPredicted RBP8.31□□□□□ -1.08
MSL3-209ENST00000467141 NFX1Q12986 1120 aaKnown RBP8.3□□□□□ -1.08
MSL3-209ENST00000467141 TRIM67Q6ZTA4 783 aa8.3□□□□□ -1.08
MSL3-209ENST00000467141 BCL11BQ9C0K0 894 aaPredicted RBP8.3□□□□□ -1.08
MSL3-209ENST00000467141 ZDHHC16Q969W1 377 aa8.29□□□□□ -1.08
MSL3-209ENST00000467141 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.29□□□□□ -1.08
MSL3-209ENST00000467141 FAM181BA6NEQ2 426 aa8.28□□□□□ -1.08
MSL3-209ENST00000467141 UPF1Q92900 1129 aaKnown RBP eCLIP8.28□□□□□ -1.08
MSL3-209ENST00000467141 ST8SIA5O15466 376 aa8.27□□□□□ -1.09
MSL3-209ENST00000467141 IFNLR1Q8IU57 520 aaPredicted RBP8.27□□□□□ -1.09
MSL3-209ENST00000467141 STK24Q9Y6E0 443 aa8.27□□□□□ -1.09
MSL3-209ENST00000467141 FAM187AA6NFU0 413 aa8.26□□□□□ -1.09
MSL3-209ENST00000467141 DSG2Q14126 1118 aa8.26□□□□□ -1.09
MSL3-209ENST00000467141 LRCH3Q96II8 777 aa8.26□□□□□ -1.09
MSL3-209ENST00000467141 KIAA1468Q9P260 1216 aa8.26□□□□□ -1.09
MSL3-209ENST00000467141 SEPT9Q9UHD8 586 aaPredicted RBP8.26□□□□□ -1.09
MSL3-209ENST00000467141 PPP1R3GB7ZBB8 358 aa8.25□□□□□ -1.09
MSL3-209ENST00000467141 AAASQ9NRG9 546 aa8.24□□□□□ -1.09
MSL3-209ENST00000467141 OXER1Q8TDS5 423 aa8.23□□□□□ -1.09
MSL3-209ENST00000467141 JPH4Q96JJ6 628 aa8.23□□□□□ -1.09
MSL3-209ENST00000467141 MTRQ99707 1265 aa8.23□□□□□ -1.09
MSL3-209ENST00000467141 IL21Q9HBE4 155 aa8.23□□□□□ -1.09
MSL3-209ENST00000467141 PPP4CP60510 307 aa8.22□□□□□ -1.09
MSL3-209ENST00000467141 GPHNQ9NQX3 736 aaPredicted RBP8.22□□□□□ -1.09
MSL3-209ENST00000467141 ZNF516Q92618 1163 aa8.21□□□□□ -1.1
MSL3-209ENST00000467141 C11orf95C9JLR9 678 aaPredicted RBP8.2□□□□□ -1.1
MSL3-209ENST00000467141 COL9A1P20849 921 aa8.2□□□□□ -1.1
MSL3-209ENST00000467141 GGCXP38435 758 aa8.2□□□□□ -1.1
MSL3-209ENST00000467141 PPP1R37O75864 691 aa8.19□□□□□ -1.1
MSL3-209ENST00000467141 FAM98CQ17RN3 349 aaKnown RBP8.17□□□□□ -1.1
MSL3-209ENST00000467141 NKX2-3Q8TAU0 364 aa8.17□□□□□ -1.1
MSL3-209ENST00000467141 SLC19A1P41440 591 aa8.16□□□□□ -1.1
MSL3-209ENST00000467141 LCE2CQ5TA81 110 aa8.16□□□□□ -1.1
MSL3-209ENST00000467141 DACH1Q9UI36 760 aa8.16□□□□□ -1.1
MSL3-209ENST00000467141 PRR20EP86478 221 aa8.15□□□□□ -1.1
MSL3-209ENST00000467141 PRR20CP86479 221 aa8.15□□□□□ -1.1
MSL3-209ENST00000467141 PRR20DP86480 221 aa8.15□□□□□ -1.1
MSL3-209ENST00000467141 PRR20BP86481 221 aa8.15□□□□□ -1.1
MSL3-209ENST00000467141 PRR20AP86496 221 aa8.15□□□□□ -1.1
MSL3-209ENST00000467141 GMPR2Q9P2T1 348 aaKnown RBP8.15□□□□□ -1.1
MSL3-209ENST00000467141 ANO8Q9HCE9 1232 aaPredicted RBP8.14□□□□□ -1.11
MSL3-209ENST00000467141 UNC13AQ9UPW8 1703 aa8.12□□□□□ -1.11
MSL3-209ENST00000467141 TNFRSF10AO00220 468 aa8.12□□□□□ -1.11
MSL3-209ENST00000467141 RB1CC1Q8TDY2 1594 aa8.12□□□□□ -1.11
MSL3-209ENST00000467141 STK25O00506 426 aa8.11□□□□□ -1.11
MSL3-209ENST00000467141 ZNF598Q86UK7 904 aaKnown RBP8.11□□□□□ -1.11
MSL3-209ENST00000467141 TMUB1Q9BVT8 246 aa8.11□□□□□ -1.11
MSL3-209ENST00000467141 TAOK2Q9UL54 1235 aa8.11□□□□□ -1.11
MSL3-209ENST00000467141 ONECUT3O60422 494 aaPredicted RBP8.1□□□□□ -1.11
MSL3-209ENST00000467141 EVI5O60447 810 aa8.1□□□□□ -1.11
MSL3-209ENST00000467141 SPRYD7Q5W111 196 aa8.1□□□□□ -1.11
MSL3-209ENST00000467141 TERTO14746 1132 aaKnown RBP8.09□□□□□ -1.11
MSL3-209ENST00000467141 ZSCAN1Q8NBB4 408 aa8.08□□□□□ -1.12
MSL3-209ENST00000467141 NACADO15069 1562 aa8.07□□□□□ -1.12
MSL3-209ENST00000467141 KCTD17Q8N5Z5 321 aa8.07□□□□□ -1.12
MSL3-209ENST00000467141 EMID1Q96A84 441 aaPredicted RBP8.06□□□□□ -1.12
MSL3-209ENST00000467141 GDF9O60383 454 aa8.05□□□□□ -1.12
MSL3-209ENST00000467141 ZNF697Q5TEC3 545 aa8.05□□□□□ -1.12
MSL3-209ENST00000467141 TRIM6-TRIM34B2RNG4 842 aa8.04□□□□□ -1.12
MSL3-209ENST00000467141 PCDHGA10Q9Y5H3 936 aa8.04□□□□□ -1.12
MSL3-209ENST00000467141 XP32Q5T750 250 aa8.03□□□□□ -1.12
MSL3-209ENST00000467141 KRTAP4-8Q9BYQ9 185 aa8.03□□□□□ -1.12
MSL3-209ENST00000467141 AXIN1O15169 862 aa8.01□□□□□ -1.13
MSL3-209ENST00000467141 RNF223E7ERA6 249 aa8□□□□□ -1.13
MSL3-209ENST00000467141 LORP23490 312 aaPredicted RBP8□□□□□ -1.13
MSL3-209ENST00000467141 COPS2P61201 443 aa8□□□□□ -1.13
MSL3-209ENST00000467141 SAMD7Q7Z3H4 446 aa8□□□□□ -1.13
MSL3-209ENST00000467141 CRIPAKQ8N1N5 446 aa8□□□□□ -1.13
MSL3-209ENST00000467141 MYO15BQ96JP2 1530 aa7.98□□□□□ -1.13
MSL3-209ENST00000467141 FBXW7Q969H0 707 aa7.97□□□□□ -1.13
MSL3-209ENST00000467141 APLP1P51693 650 aa7.96□□□□□ -1.14
MSL3-209ENST00000467141 TYW1BQ6NUM6 668 aa7.96□□□□□ -1.14
MSL3-209ENST00000467141 LIAT1Q6ZQX7 453 aa7.96□□□□□ -1.14
MSL3-209ENST00000467141 ZCCHC6Q5VYS8 1495 aaKnown RBP7.95□□□□□ -1.14
MSL3-209ENST00000467141 SNRPBP14678 240 aaKnown RBP7.95□□□□□ -1.14
MSL3-209ENST00000467141 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.94□□□□□ -1.14
MSL3-209ENST00000467141 GMPRP36959 345 aa7.94□□□□□ -1.14
MSL3-209ENST00000467141 C6orf132Q5T0Z8 1188 aa7.94□□□□□ -1.14
MSL3-209ENST00000467141 SLC16A10Q8TF71 515 aa7.94□□□□□ -1.14
MSL3-209ENST00000467141 RNF40O75150 1001 aa7.93□□□□□ -1.14
MSL3-209ENST00000467141 MAP3K9P80192 1104 aa7.93□□□□□ -1.14
MSL3-209ENST00000467141 PPP1R15BQ5SWA1 713 aa7.93□□□□□ -1.14
MSL3-209ENST00000467141 BICRAQ9NZM4 1560 aa7.93□□□□□ -1.14
MSL3-209ENST00000467141 FOXC1Q12948 553 aa7.92□□□□□ -1.14
MSL3-209ENST00000467141 PACS2Q86VP3 889 aa7.92□□□□□ -1.14
MSL3-209ENST00000467141 PPEF1O14829 653 aaPredicted RBP7.91□□□□□ -1.14
MSL3-209ENST00000467141 ZPR1O75312 459 aa7.91□□□□□ -1.14
MSL3-209ENST00000467141 AVPP01185 164 aa7.91□□□□□ -1.14
MSL3-209ENST00000467141 DCAF1Q9Y4B6 1507 aa7.91□□□□□ -1.14
MSL3-209ENST00000467141 CTC1Q2NKJ3 1217 aa7.9□□□□□ -1.14
MSL3-209ENST00000467141 KRTAP9-2Q9BYQ4 174 aa7.9□□□□□ -1.14
MSL3-209ENST00000467141 SMAPO00193 183 aa7.89□□□□□ -1.15
MSL3-209ENST00000467141 PHF14O94880 888 aa7.89□□□□□ -1.15
MSL3-209ENST00000467141 ANKLE1Q8NAG6 615 aa7.89□□□□□ -1.15
MSL3-209ENST00000467141 KRTAP9-6A0A140TA67 174 aa7.88□□□□□ -1.15
MSL3-209ENST00000467141 DCAF8L2P0C7V8 631 aa7.88□□□□□ -1.15
MSL3-209ENST00000467141 KCNMA1Q12791 1236 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms