RNA–Protein interactions for RNA: ENST00000466274.1

NCL-208, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 671 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-208ENST00000466274 ARHGAP33O14559 1287 aa11.29□□□□□ -0.6
NCL-208ENST00000466274 CHMP7Q8WUX9 453 aaPredicted RBP11.29□□□□□ -0.6
NCL-208ENST00000466274 AQRO60306 1485 aaKnown RBP eCLIP11.29□□□□□ -0.61e-8■■■■■ 28.5
NCL-208ENST00000466274 ABCC8Q09428 1581 aa11.28□□□□□ -0.6
NCL-208ENST00000466274 LARP6Q9BRS8 491 aaKnown RBP11.28□□□□□ -0.6
NCL-208ENST00000466274 PSEN2P49810 448 aa11.27□□□□□ -0.61
NCL-208ENST00000466274 EIF4G3O43432 1585 aaKnown RBP11.27□□□□□ -0.61
NCL-208ENST00000466274 TOPBP1Q92547 1522 aa11.25□□□□□ -0.61
NCL-208ENST00000466274 PPP4R3BQ5MIZ7 849 aa11.25□□□□□ -0.61
NCL-208ENST00000466274 DMRTA1Q5VZB9 504 aa11.25□□□□□ -0.61
NCL-208ENST00000466274 ADGRD1Q6QNK2 874 aa11.23□□□□□ -0.61
NCL-208ENST00000466274 CADPS2Q86UW7 1296 aa11.23□□□□□ -0.61
NCL-208ENST00000466274 WIZO95785 1651 aa11.22□□□□□ -0.61
NCL-208ENST00000466274 DDX27Q96GQ7 796 aaKnown RBP11.22□□□□□ -0.61
NCL-208ENST00000466274 CHD1O14646 1710 aa11.21□□□□□ -0.61
NCL-208ENST00000466274 GAPVD1Q14C86 1478 aa11.2□□□□□ -0.62
NCL-208ENST00000466274 ZNF454Q8N9F8 522 aa11.2□□□□□ -0.62
NCL-208ENST00000466274 MFSD10Q14728 455 aa11.19□□□□□ -0.62
NCL-208ENST00000466274 KCNK17Q96T54 332 aa11.19□□□□□ -0.62
NCL-208ENST00000466274 SYNJ1O43426 1573 aa11.19□□□□□ -0.62
NCL-208ENST00000466274 CLASP1Q7Z460 1538 aa11.19□□□□□ -0.62
NCL-208ENST00000466274 EVI5O60447 810 aa11.17□□□□□ -0.62
NCL-208ENST00000466274 TDRD9Q8NDG6 1382 aaKnown RBP11.16□□□□□ -0.62
NCL-208ENST00000466274 TK2O00142 265 aa11.16□□□□□ -0.62
NCL-208ENST00000466274 FOSBP53539 338 aa11.16□□□□□ -0.62
NCL-208ENST00000466274 ANO8Q9HCE9 1232 aaPredicted RBP11.16□□□□□ -0.62
NCL-208ENST00000466274 EMILIN3Q9NT22 766 aa11.16□□□□□ -0.62
NCL-208ENST00000466274 HRO43593 1189 aa11.15□□□□□ -0.62
NCL-208ENST00000466274 MAP3K9P80192 1104 aa11.15□□□□□ -0.62
NCL-208ENST00000466274 SNAPC4Q5SXM2 1469 aa11.14□□□□□ -0.63
NCL-208ENST00000466274 DNMBPQ6XZF7 1577 aa11.14□□□□□ -0.63
NCL-208ENST00000466274 BBXQ8WY36 941 aaPredicted RBP11.13□□□□□ -0.63
NCL-208ENST00000466274 TOP2AP11388 1531 aaKnown RBP11.13□□□□□ -0.63
NCL-208ENST00000466274 MAGI1Q96QZ7 1491 aaPredicted RBP11.12□□□□□ -0.63
NCL-208ENST00000466274 SOGA1O94964 1423 aa11.12□□□□□ -0.63
NCL-208ENST00000466274 KCNH8Q96L42 1107 aa11.12□□□□□ -0.63
NCL-208ENST00000466274 BCL2L12Q9HB09 334 aa11.12□□□□□ -0.63
NCL-208ENST00000466274 TARBP1Q13395 1621 aaKnown RBP11.12□□□□□ -0.63
NCL-208ENST00000466274 POLA1P09884 1462 aaPredicted RBP11.11□□□□□ -0.63
NCL-208ENST00000466274 VPS9D1Q9Y2B5 631 aa11.1□□□□□ -0.63
NCL-208ENST00000466274 SYNJ2O15056 1496 aa11.09□□□□□ -0.63
NCL-208ENST00000466274 FAM69CQ0P6D2 419 aa11.09□□□□□ -0.63
NCL-208ENST00000466274 JPH4Q96JJ6 628 aa11.09□□□□□ -0.63
NCL-208ENST00000466274 GRIN2BQ13224 1484 aa11.08□□□□□ -0.64
NCL-208ENST00000466274 STAC3Q96MF2 364 aa11.08□□□□□ -0.64
NCL-208ENST00000466274 ADAM33Q9BZ11 813 aa11.08□□□□□ -0.64
NCL-208ENST00000466274 PTPREP23469 700 aa11.07□□□□□ -0.64
NCL-208ENST00000466274 ZDHHC16Q969W1 377 aa11.07□□□□□ -0.64
NCL-208ENST00000466274 HCSTQ9UBK5 93 aa11.07□□□□□ -0.64
NCL-208ENST00000466274 RAD54L2Q9Y4B4 1467 aa11.06□□□□□ -0.64
NCL-208ENST00000466274 FBXO41Q8TF61 875 aa11.06□□□□□ -0.64
NCL-208ENST00000466274 KCTD12Q96CX2 325 aaKnown RBP11.06□□□□□ -0.64
NCL-208ENST00000466274 RTN4Q9NQC3 1192 aaKnown RBP11.06□□□□□ -0.64
NCL-208ENST00000466274 WDR97A6NE52 1622 aa11.06□□□□□ -0.64
NCL-208ENST00000466274 AMER1Q5JTC6 1135 aaPredicted RBP11.05□□□□□ -0.64
NCL-208ENST00000466274 CCDC88BA6NC98 1476 aa11.04□□□□□ -0.64
NCL-208ENST00000466274 ZBED2Q9BTP6 218 aa11.03□□□□□ -0.64
NCL-208ENST00000466274 SLC4A5Q9BY07 1137 aa11.03□□□□□ -0.64
NCL-208ENST00000466274 PCDHGA10Q9Y5H3 936 aa11.03□□□□□ -0.64
NCL-208ENST00000466274 PRDM2Q13029 1718 aa11.02□□□□□ -0.65
NCL-208ENST00000466274 CAMK2BQ13554 666 aa11.02□□□□□ -0.65
NCL-208ENST00000466274 SPRYD3Q8NCJ5 442 aa11.02□□□□□ -0.65
NCL-208ENST00000466274 DPYSL4O14531 572 aa11.01□□□□□ -0.65
NCL-208ENST00000466274 BHMG1C9JSJ3 638 aaPredicted RBP10.99□□□□□ -0.65
NCL-208ENST00000466274 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.99□□□□□ -0.65
NCL-208ENST00000466274 ABCC10Q5T3U5 1492 aa10.99□□□□□ -0.65
NCL-208ENST00000466274 PLA2G2EQ9NZK7 142 aa10.98□□□□□ -0.65
NCL-208ENST00000466274 ERCC6L2Q5T890 1561 aa10.98□□□□□ -0.65
NCL-208ENST00000466274 PHF14O94880 888 aa10.96□□□□□ -0.65
NCL-208ENST00000466274 COL9A1P20849 921 aa10.96□□□□□ -0.65
NCL-208ENST00000466274 TYW1BQ6NUM6 668 aa10.96□□□□□ -0.65
NCL-208ENST00000466274 PTPN5P54829 565 aa10.95□□□□□ -0.66
NCL-208ENST00000466274 PAXIP1Q6ZW49 1069 aaPredicted RBP10.95□□□□□ -0.66
NCL-208ENST00000466274 CFAP44Q96MT7 982 aa10.95□□□□□ -0.66
NCL-208ENST00000466274 FGD5Q6ZNL6 1462 aa10.94□□□□□ -0.66
NCL-208ENST00000466274 MRPL50Q8N5N7 158 aaKnown RBP10.94□□□□□ -0.66
NCL-208ENST00000466274 FBXW7Q969H0 707 aa10.94□□□□□ -0.66
NCL-208ENST00000466274 KDM6BO15054 1643 aa10.94□□□□□ -0.66
NCL-208ENST00000466274 PROX2Q3B8N5 592 aa10.93□□□□□ -0.66
NCL-208ENST00000466274 GOLGA8CPA6NN73 597 aa10.92□□□□□ -0.66
NCL-208ENST00000466274 PPP1R3GB7ZBB8 358 aa10.92□□□□□ -0.66
NCL-208ENST00000466274 DDX12PQ92771 950 aa10.91□□□□□ -0.66
NCL-208ENST00000466274 LMTK3Q96Q04 1460 aa10.91□□□□□ -0.66
NCL-208ENST00000466274 CEP170Q5SW79 1584 aa10.9□□□□□ -0.66
NCL-208ENST00000466274 ADGRL1O94910 1474 aa10.9□□□□□ -0.66
NCL-208ENST00000466274 WNT2BQ93097 391 aa10.9□□□□□ -0.66
NCL-208ENST00000466274 RBM33Q96EV2 1170 aaKnown RBP10.9□□□□□ -0.66
NCL-208ENST00000466274 EPAS1Q99814 870 aa10.9□□□□□ -0.66
NCL-208ENST00000466274 HECW2Q9P2P5 1572 aa10.9□□□□□ -0.67
NCL-208ENST00000466274 GRIN2AQ12879 1464 aa10.89□□□□□ -0.67
NCL-208ENST00000466274 C6orf132Q5T0Z8 1188 aa10.89□□□□□ -0.67
NCL-208ENST00000466274 THSD4Q6ZMP0 1018 aa10.89□□□□□ -0.67
NCL-208ENST00000466274 NUP160Q12769 1436 aa10.89□□□□□ -0.67
NCL-208ENST00000466274 KIF13AQ9H1H9 1805 aa10.88□□□□□ -0.67
NCL-208ENST00000466274 NBPF3Q9H094 633 aa10.88□□□□□ -0.67
NCL-208ENST00000466274 MAPKBP1O60336 1514 aa10.88□□□□□ -0.67
NCL-208ENST00000466274 PRG4Q92954 1404 aaPredicted RBP10.87□□□□□ -0.67
NCL-208ENST00000466274 SOCS7O14512 581 aa10.87□□□□□ -0.67
NCL-208ENST00000466274 RABGEF1Q9UJ41 708 aa10.87□□□□□ -0.67
NCL-208ENST00000466274 E2F4Q16254 413 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms