RNA–Protein interactions for RNA: ENST00000466154.5

SLX4-202, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

TSL 1 (best)

Gene SLX4, Length 3,228 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-202ENST00000466154 AFAP1Q8N556 730 aa22.1■■□□□ 1.13
SLX4-202ENST00000466154 KDM5CP41229 1560 aa22.09■■□□□ 1.13
SLX4-202ENST00000466154 EFCAB2Q5VUJ9 269 aa22.09■■□□□ 1.13
SLX4-202ENST00000466154 TTC37Q6PGP7 1564 aa22.08■■□□□ 1.13
SLX4-202ENST00000466154 CDC42BPBQ9Y5S2 1711 aa22.08■■□□□ 1.12
SLX4-202ENST00000466154 PNISRQ8TF01 805 aaKnown RBP22.08■■□□□ 1.12
SLX4-202ENST00000466154 UHRF1BP1Q6BDS2 1440 aa22.06■■□□□ 1.12
SLX4-202ENST00000466154 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.05■■□□□ 1.12
SLX4-202ENST00000466154 ARID4BQ4LE39 1312 aaPredicted RBP22.04■■□□□ 1.12
SLX4-202ENST00000466154 ANP32EQ9BTT0 268 aa22.04■■□□□ 1.12
SLX4-202ENST00000466154 NUDCQ9Y266 331 aa22.04■■□□□ 1.12
SLX4-202ENST00000466154 ARHGEF5Q12774 1597 aa22.03■■□□□ 1.12
SLX4-202ENST00000466154 PREX2Q70Z35 1606 aa22.02■■□□□ 1.12
SLX4-202ENST00000466154 MYBBP1AQ9BQG0 1328 aaKnown RBP22.02■■□□□ 1.11
SLX4-202ENST00000466154 BCL11AQ9H165 835 aa22.01■■□□□ 1.11
SLX4-202ENST00000466154 SPAG9O60271 1321 aaKnown RBP22.01■■□□□ 1.11
SLX4-202ENST00000466154 ARHGEF12Q9NZN5 1544 aa21.99■■□□□ 1.11
SLX4-202ENST00000466154 PANK3Q9H999 370 aa21.99■■□□□ 1.11
SLX4-202ENST00000466154 CCDC136Q96JN2 1154 aa21.99■■□□□ 1.11
SLX4-202ENST00000466154 PRAG1Q86YV5 1406 aa21.99■■□□□ 1.11
SLX4-202ENST00000466154 RALBP1Q15311 655 aa21.98■■□□□ 1.11
SLX4-202ENST00000466154 PLA2R1Q13018 1463 aa21.97■■□□□ 1.11
SLX4-202ENST00000466154 KDM5DQ9BY66 1539 aa21.97■■□□□ 1.11
SLX4-202ENST00000466154 KTN1Q86UP2 1357 aaKnown RBP21.97■■□□□ 1.11
SLX4-202ENST00000466154 POLR1AO95602 1720 aaPredicted RBP21.97■■□□□ 1.11
SLX4-202ENST00000466154 TRAPPC8Q9Y2L5 1435 aa21.96■■□□□ 1.11
SLX4-202ENST00000466154 ABCC2Q92887 1545 aa21.96■■□□□ 1.11
SLX4-202ENST00000466154 ERICH6Q7L0X2 663 aa21.95■■□□□ 1.1
SLX4-202ENST00000466154 DISP3Q9P2K9 1392 aa21.95■■□□□ 1.1
SLX4-202ENST00000466154 A2MP01023 1474 aa21.95■■□□□ 1.1
SLX4-202ENST00000466154 TMF1P82094 1093 aa21.94■■□□□ 1.1
SLX4-202ENST00000466154 KIF3BO15066 747 aa21.93■■□□□ 1.1
SLX4-202ENST00000466154 ERICH6BQ5W0A0 696 aa21.93■■□□□ 1.1
SLX4-202ENST00000466154 NLRP13Q86W25 1043 aa21.93■■□□□ 1.1
SLX4-202ENST00000466154 SMG6Q86US8 1419 aaKnown RBP21.92■■□□□ 1.1
SLX4-202ENST00000466154 PLCH2O75038 1416 aa21.9■■□□□ 1.1
SLX4-202ENST00000466154 CHGAP10645 457 aaKnown RBP21.9■■□□□ 1.1
SLX4-202ENST00000466154 TESK2Q96S53 571 aa21.89■■□□□ 1.1
SLX4-202ENST00000466154 MSH5O43196 834 aa21.89■■□□□ 1.09
SLX4-202ENST00000466154 SENP3Q9H4L4 574 aaPredicted RBP21.89■■□□□ 1.09
SLX4-202ENST00000466154 BRD4O60885 1362 aaPredicted RBP21.89■■□□□ 1.09
SLX4-202ENST00000466154 MYO5CQ9NQX4 1742 aa21.88■■□□□ 1.09
SLX4-202ENST00000466154 CDCA7LQ96GN5 454 aa21.88■■□□□ 1.09
SLX4-202ENST00000466154 PER1O15534 1290 aaPredicted RBP21.86■■□□□ 1.09
SLX4-202ENST00000466154 ERBINQ96RT1 1412 aa21.85■■□□□ 1.09
SLX4-202ENST00000466154 DUOX2Q9NRD8 1548 aa21.85■■□□□ 1.09
SLX4-202ENST00000466154 KNSTRNQ9Y448 316 aa21.84■■□□□ 1.09
SLX4-202ENST00000466154 ZCCHC11Q5TAX3 1644 aaKnown RBP21.82■■□□□ 1.08
SLX4-202ENST00000466154 SCAPERQ9BY12 1400 aa21.81■■□□□ 1.08
SLX4-202ENST00000466154 SHROOM2Q13796 1616 aa21.81■■□□□ 1.08
SLX4-202ENST00000466154 RCAN3Q9UKA8 241 aa21.81■■□□□ 1.08
SLX4-202ENST00000466154 PLIN1O60240 522 aa21.81■■□□□ 1.08
SLX4-202ENST00000466154 TRPM1Q7Z4N2 1603 aa21.81■■□□□ 1.08
SLX4-202ENST00000466154 EXOC6Q8TAG9 804 aa21.8■■□□□ 1.08
SLX4-202ENST00000466154 UNC13BO14795 1591 aa21.79■■□□□ 1.08
SLX4-202ENST00000466154 LRPPRCP42704 1394 aaKnown RBP21.78■■□□□ 1.08
SLX4-202ENST00000466154 PARD3Q8TEW0 1356 aa21.78■■□□□ 1.08
SLX4-202ENST00000466154 RRP1P56182 461 aaKnown RBP21.76■■□□□ 1.07
SLX4-202ENST00000466154 CFAP70Q5T0N1 1121 aa21.76■■□□□ 1.07
SLX4-202ENST00000466154 MAST1Q9Y2H9 1570 aa21.76■■□□□ 1.07
SLX4-202ENST00000466154 KANK1Q14678 1352 aa21.75■■□□□ 1.07
SLX4-202ENST00000466154 GPRASP1Q5JY77 1395 aa21.75■■□□□ 1.07
SLX4-202ENST00000466154 GGT6Q6P531 493 aa21.75■■□□□ 1.07
SLX4-202ENST00000466154 COL17A1Q9UMD9 1497 aaPredicted RBP21.75■■□□□ 1.07
SLX4-202ENST00000466154 WDR43Q15061 677 aaKnown RBP eCLIP21.75■■□□□ 1.07
SLX4-202ENST00000466154 IQGAP3Q86VI3 1631 aa21.75■■□□□ 1.07
SLX4-202ENST00000466154 ADAMTS8Q9UP79 889 aa21.74■■□□□ 1.07
SLX4-202ENST00000466154 PLXNC1O60486 1568 aa21.74■■□□□ 1.07
SLX4-202ENST00000466154 ABCC1P33527 1531 aa21.73■■□□□ 1.07
SLX4-202ENST00000466154 NPM1P06748 294 aaKnown RBP eCLIP21.73■■□□□ 1.07
SLX4-202ENST00000466154 FANCAO15360 1455 aa21.72■■□□□ 1.07
SLX4-202ENST00000466154 FANCIQ9NVI1 1328 aa21.71■■□□□ 1.07
SLX4-202ENST00000466154 NUTM2DQ5VT03 806 aaPredicted RBP21.71■■□□□ 1.07
SLX4-202ENST00000466154 CCDC146Q8IYE0 955 aa21.7■■□□□ 1.07
SLX4-202ENST00000466154 NPM2Q86SE8 214 aaKnown RBP21.69■■□□□ 1.06
SLX4-202ENST00000466154 RNF123Q5XPI4 1314 aa21.68■■□□□ 1.06
SLX4-202ENST00000466154 PRDM15P57071 1507 aaPredicted RBP21.68■■□□□ 1.06
SLX4-202ENST00000466154 TNNT2P45379 298 aaPredicted RBP21.68■■□□□ 1.06
SLX4-202ENST00000466154 ADGRF5Q8IZF2 1346 aa21.67■■□□□ 1.06
SLX4-202ENST00000466154 PPP2R1AP30153 589 aa21.67■■□□□ 1.06
SLX4-202ENST00000466154 ADGRL1O94910 1474 aa21.67■■□□□ 1.06
SLX4-202ENST00000466154 ATP10AO60312 1499 aa21.67■■□□□ 1.06
SLX4-202ENST00000466154 WDR7Q9Y4E6 1490 aa21.66■■□□□ 1.06
SLX4-202ENST00000466154 CDCA8Q53HL2 280 aa21.66■■□□□ 1.06
SLX4-202ENST00000466154 CLASP1Q7Z460 1538 aa21.65■■□□□ 1.06
SLX4-202ENST00000466154 TRAK1Q9UPV9 953 aa21.64■■□□□ 1.05
SLX4-202ENST00000466154 SKAP1Q86WV1 359 aa21.64■■□□□ 1.05
SLX4-202ENST00000466154 E9PCH4 1651 aa21.64■■□□□ 1.05
SLX4-202ENST00000466154 UHRF1BP1LA0JNW5 1464 aa21.64■■□□□ 1.05
SLX4-202ENST00000466154 UGGT1Q9NYU2 1555 aa21.64■■□□□ 1.05
SLX4-202ENST00000466154 EIF2AK4Q9P2K8 1649 aaKnown RBP21.63■■□□□ 1.05
SLX4-202ENST00000466154 PDE3BQ13370 1112 aa21.63■■□□□ 1.05
SLX4-202ENST00000466154 MAGI2Q86UL8 1455 aa21.63■■□□□ 1.05
SLX4-202ENST00000466154 WASHC2CQ9Y4E1 1318 aa21.62■■□□□ 1.05
SLX4-202ENST00000466154 ZFYVE16Q7Z3T8 1539 aa21.62■■□□□ 1.05
SLX4-202ENST00000466154 ASXL2Q76L83 1435 aa21.61■■□□□ 1.05
SLX4-202ENST00000466154 AMER1Q5JTC6 1135 aaPredicted RBP21.61■■□□□ 1.05
SLX4-202ENST00000466154 TMEM132EQ6IEE7 984 aa21.6■■□□□ 1.05
SLX4-202ENST00000466154 CRBNQ96SW2 442 aa21.59■■□□□ 1.05
SLX4-202ENST00000466154 ATP7AQ04656 1500 aa21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms