RNA–Protein interactions for RNA: ENST00000465301.2

RTL9-201, Transcript of retrotransposon Gag like 9, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RTL9, Length 5,426 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9-201ENST00000465301 SPRYD3Q8NCJ5 442 aa10.15□□□□□ -0.78
RTL9-201ENST00000465301 ANKRD20A12PQ8NF67 263 aa10.15□□□□□ -0.78
RTL9-201ENST00000465301 ANKRD30AQ9BXX3 1397 aa10.15□□□□□ -0.78
RTL9-201ENST00000465301 C1orf141Q5JVX7 400 aa10.15□□□□□ -0.78
RTL9-201ENST00000465301 WWC1Q8IX03 1113 aa10.15□□□□□ -0.79
RTL9-201ENST00000465301 SENP3-EIF4A1A0A087X0R7 540 aa10.14□□□□□ -0.79
RTL9-201ENST00000465301 H3BQV1 296 aa10.14□□□□□ -0.79
RTL9-201ENST00000465301 IFFO2Q5TF58 517 aa10.14□□□□□ -0.79
RTL9-201ENST00000465301 ARHGAP35Q9NRY4 1499 aa10.14□□□□□ -0.79
RTL9-201ENST00000465301 CCDC180Q9P1Z9 1646 aa10.14□□□□□ -0.79
RTL9-201ENST00000465301 EVA1CP58658 441 aa10.14□□□□□ -0.79
RTL9-201ENST00000465301 RSPH4AQ5TD94 716 aa10.14□□□□□ -0.79
RTL9-201ENST00000465301 PHLDB1Q86UU1 1377 aa10.14□□□□□ -0.79
RTL9-201ENST00000465301 PES1O00541 588 aaKnown RBP10.13□□□□□ -0.79
RTL9-201ENST00000465301 MSH5O43196 834 aa10.13□□□□□ -0.79
RTL9-201ENST00000465301 IPO7O95373 1038 aaKnown RBP10.13□□□□□ -0.79
RTL9-201ENST00000465301 FAM184AQ8NB25 1140 aa10.13□□□□□ -0.79
RTL9-201ENST00000465301 TRIM29Q14134 588 aa10.13□□□□□ -0.79
RTL9-201ENST00000465301 HOOK1Q9UJC3 728 aaKnown RBP10.13□□□□□ -0.79
RTL9-201ENST00000465301 CCDC43Q96MW1 224 aaKnown RBP10.13□□□□□ -0.79
RTL9-201ENST00000465301 PKD2Q13563 968 aa10.12□□□□□ -0.79
RTL9-201ENST00000465301 MEX3CQ5U5Q3 659 aaKnown RBP10.12□□□□□ -0.79
RTL9-201ENST00000465301 B4GALNT3Q6L9W6 998 aa10.12□□□□□ -0.79
RTL9-201ENST00000465301 GOLGA6L3A6NEY3 463 aa10.12□□□□□ -0.79
RTL9-201ENST00000465301 NEXNQ0ZGT2 675 aa10.12□□□□□ -0.79
RTL9-201ENST00000465301 RCAN3Q9UKA8 241 aa10.12□□□□□ -0.79
RTL9-201ENST00000465301 SLC4A10Q6U841 1118 aa10.12□□□□□ -0.79
RTL9-201ENST00000465301 CARMIL1Q5VZK9 1371 aa10.12□□□□□ -0.79
RTL9-201ENST00000465301 UACAQ9BZF9 1416 aa10.11□□□□□ -0.79
RTL9-201ENST00000465301 CDR1P51861 262 aa10.11□□□□□ -0.79
RTL9-201ENST00000465301 TTC5Q8N0Z6 440 aa10.11□□□□□ -0.79
RTL9-201ENST00000465301 NACADO15069 1562 aa10.11□□□□□ -0.79
RTL9-201ENST00000465301 RUFY2Q8WXA3 655 aa10.11□□□□□ -0.79
RTL9-201ENST00000465301 GOLGA6L19H0YKK7 550 aa10.11□□□□□ -0.79
RTL9-201ENST00000465301 SIN3AQ96ST3 1273 aa10.11□□□□□ -0.79
RTL9-201ENST00000465301 SETD5Q9C0A6 1442 aa10.1□□□□□ -0.79
RTL9-201ENST00000465301 MFAP1P55081 439 aaKnown RBP10.1□□□□□ -0.79
RTL9-201ENST00000465301 R3HCC1Q9Y3T6 440 aaKnown RBP10.1□□□□□ -0.79
RTL9-201ENST00000465301 PDE3BQ13370 1112 aa10.09□□□□□ -0.79
RTL9-201ENST00000465301 RDXP35241 583 aaKnown RBP10.09□□□□□ -0.79
RTL9-201ENST00000465301 CENPJQ9HC77 1338 aaPredicted RBP10.09□□□□□ -0.79
RTL9-201ENST00000465301 DDX11L8A8MPP1 907 aa10.09□□□□□ -0.79
RTL9-201ENST00000465301 RTN4Q9NQC3 1192 aaKnown RBP10.08□□□□□ -0.8
RTL9-201ENST00000465301 HSPA5P11021 654 aaKnown RBP10.08□□□□□ -0.8
RTL9-201ENST00000465301 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.08□□□□□ -0.8
RTL9-201ENST00000465301 WASHC2CQ9Y4E1 1318 aa10.08□□□□□ -0.8
RTL9-201ENST00000465301 BECN2A8MW95 431 aa10.08□□□□□ -0.8
RTL9-201ENST00000465301 FOXD1Q16676 465 aa10.08□□□□□ -0.8
RTL9-201ENST00000465301 RRP12Q5JTH9 1297 aaKnown RBP10.08□□□□□ -0.8
RTL9-201ENST00000465301 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.08□□□□□ -0.8
RTL9-201ENST00000465301 NUP155O75694 1391 aa10.08□□□□□ -0.8
RTL9-201ENST00000465301 VPS37DQ86XT2 251 aa10.08□□□□□ -0.8
RTL9-201ENST00000465301 PCMTD1Q96MG8 357 aaPredicted RBP10.08□□□□□ -0.8
RTL9-201ENST00000465301 DDX58O95786 925 aaKnown RBP10.07□□□□□ -0.8
RTL9-201ENST00000465301 PDS5BQ9NTI5 1447 aa10.07□□□□□ -0.8
RTL9-201ENST00000465301 CUX2O14529 1486 aa10.07□□□□□ -0.8
RTL9-201ENST00000465301 ERICH2A1L162 156 aa10.07□□□□□ -0.8
RTL9-201ENST00000465301 TEFQ10587 303 aa10.07□□□□□ -0.8
RTL9-201ENST00000465301 WWC2Q6AWC2 1192 aa10.07□□□□□ -0.8
RTL9-201ENST00000465301 KIF3BO15066 747 aa10.06□□□□□ -0.8
RTL9-201ENST00000465301 DHX16O60231 1041 aaKnown RBP10.06□□□□□ -0.8
RTL9-201ENST00000465301 FMN1Q68DA7 1419 aa10.06□□□□□ -0.8
RTL9-201ENST00000465301 TRDNQ13061 729 aa10.06□□□□□ -0.8
RTL9-201ENST00000465301 SKOR2Q2VWA4 1001 aaPredicted RBP10.06□□□□□ -0.8
RTL9-201ENST00000465301 COG3Q96JB2 828 aa10.06□□□□□ -0.8
RTL9-201ENST00000465301 DIAPH3Q9NSV4 1193 aa10.06□□□□□ -0.8
RTL9-201ENST00000465301 RAD21O60216 631 aa10.06□□□□□ -0.8
RTL9-201ENST00000465301 ODF2Q5BJF6 829 aa10.06□□□□□ -0.8
RTL9-201ENST00000465301 LTV1Q96GA3 475 aaPredicted RBP10.05□□□□□ -0.8
RTL9-201ENST00000465301 ZKSCAN1P17029 563 aaPredicted RBP10.05□□□□□ -0.8
RTL9-201ENST00000465301 RBM33Q96EV2 1170 aaKnown RBP10.05□□□□□ -0.8
RTL9-201ENST00000465301 ROCK1Q13464 1354 aa10.05□□□□□ -0.8
RTL9-201ENST00000465301 AMER1Q5JTC6 1135 aaPredicted RBP10.04□□□□□ -0.8
RTL9-201ENST00000465301 RNF20Q5VTR2 975 aa10.04□□□□□ -0.8
RTL9-201ENST00000465301 CT47A1Q5JQC4 288 aaPredicted RBP10.04□□□□□ -0.8
RTL9-201ENST00000465301 CPLX1O14810 134 aa10.04□□□□□ -0.8
RTL9-201ENST00000465301 SLKQ9H2G2 1235 aaPredicted RBP10.04□□□□□ -0.8
RTL9-201ENST00000465301 GZF1Q9H116 711 aaPredicted RBP10.04□□□□□ -0.8
RTL9-201ENST00000465301 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.03□□□□□ -0.8
RTL9-201ENST00000465301 CALRP27797 417 aaKnown RBP10.03□□□□□ -0.8
RTL9-201ENST00000465301 FBXW7Q969H0 707 aa10.03□□□□□ -0.8
RTL9-201ENST00000465301 ACBD3Q9H3P7 528 aa10.03□□□□□ -0.8
RTL9-201ENST00000465301 SAFBQ15424 915 aaKnown RBP eCLIP10.02□□□□□ -0.8
RTL9-201ENST00000465301 NOL8Q76FK4 1167 aaKnown RBP10.02□□□□□ -0.8
RTL9-201ENST00000465301 NLRP13Q86W25 1043 aa10.02□□□□□ -0.81
RTL9-201ENST00000465301 BRMS1Q9HCU9 246 aa10.02□□□□□ -0.81
RTL9-201ENST00000465301 HSP90AB4PQ58FF6 505 aa10.02□□□□□ -0.81
RTL9-201ENST00000465301 AK7Q96M32 723 aa10.02□□□□□ -0.81
RTL9-201ENST00000465301 C9orf78Q9NZ63 289 aaPredicted RBP10.02□□□□□ -0.81
RTL9-201ENST00000465301 CCDC173Q0VFZ6 552 aa10.02□□□□□ -0.81
RTL9-201ENST00000465301 RILPL2Q969X0 211 aa10.02□□□□□ -0.81
RTL9-201ENST00000465301 MYO6Q9UM54 1294 aa10.02□□□□□ -0.81
RTL9-201ENST00000465301 VGFO15240 615 aaPredicted RBP10.01□□□□□ -0.81
RTL9-201ENST00000465301 DEKP35659 375 aaKnown RBP10.01□□□□□ -0.81
RTL9-201ENST00000465301 CCAR2Q8N163 923 aaKnown RBP10.01□□□□□ -0.81
RTL9-201ENST00000465301 REC8O95072 547 aa10.01□□□□□ -0.81
RTL9-201ENST00000465301 MCTP1Q6DN14 999 aa10.01□□□□□ -0.81
RTL9-201ENST00000465301 EVC2Q86UK5 1308 aa10.01□□□□□ -0.81
RTL9-201ENST00000465301 IFIT2P09913 472 aaKnown RBP10.01□□□□□ -0.81
RTL9-201ENST00000465301 HMGB2P26583 209 aaKnown RBP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms