RNA–Protein interactions for RNA: ENST00000461221.5

BRCA1-205, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 5,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-205ENST00000461221 RRP12Q5JTH9 1297 aaKnown RBP11.1□□□□□ -0.63
BRCA1-205ENST00000461221 CCDC47Q96A33 483 aaKnown RBP11.1□□□□□ -0.63
BRCA1-205ENST00000461221 TEX35Q5T0J7 233 aa11.09□□□□□ -0.63
BRCA1-205ENST00000461221 ROCK2O75116 1388 aaKnown RBP11.09□□□□□ -0.63
BRCA1-205ENST00000461221 CENPJQ9HC77 1338 aaPredicted RBP11.09□□□□□ -0.63
BRCA1-205ENST00000461221 PDE3BQ13370 1112 aa11.09□□□□□ -0.63
BRCA1-205ENST00000461221 MLECQ14165 292 aa11.09□□□□□ -0.63
BRCA1-205ENST00000461221 ANKRD20A12PQ8NF67 263 aa11.08□□□□□ -0.64
BRCA1-205ENST00000461221 FOXD4L1Q9NU39 408 aa11.08□□□□□ -0.64
BRCA1-205ENST00000461221 CDR1P51861 262 aa11.08□□□□□ -0.64
BRCA1-205ENST00000461221 SLC4A10Q6U841 1118 aa11.08□□□□□ -0.64
BRCA1-205ENST00000461221 TERF2IPQ9NYB0 399 aa11.08□□□□□ -0.64
BRCA1-205ENST00000461221 SYNE3Q6ZMZ3 975 aa11.08□□□□□ -0.64
BRCA1-205ENST00000461221 PATL2C9JE40 543 aaKnown RBP11.08□□□□□ -0.64
BRCA1-205ENST00000461221 LRRFIP1Q32MZ4 808 aaKnown RBP11.08□□□□□ -0.64
BRCA1-205ENST00000461221 ZNF771Q7L3S4 317 aaPredicted RBP11.08□□□□□ -0.64
BRCA1-205ENST00000461221 PHLDB1Q86UU1 1377 aa11.07□□□□□ -0.64
BRCA1-205ENST00000461221 SETD5Q9C0A6 1442 aa11.07□□□□□ -0.64
BRCA1-205ENST00000461221 TCEAL9Q9UHQ7 104 aa11.07□□□□□ -0.64
BRCA1-205ENST00000461221 CPLX2Q6PUV4 134 aaKnown RBP11.07□□□□□ -0.64
BRCA1-205ENST00000461221 KRI1Q8N9T8 703 aaKnown RBP11.06□□□□□ -0.64
BRCA1-205ENST00000461221 CCDC9Q9Y3X0 531 aaKnown RBP11.06□□□□□ -0.64
BRCA1-205ENST00000461221 GTF2E1P29083 439 aaPredicted RBP11.06□□□□□ -0.64
BRCA1-205ENST00000461221 AMOTL1Q8IY63 956 aa11.06□□□□□ -0.64
BRCA1-205ENST00000461221 DDX49Q9Y6V7 483 aaKnown RBP11.06□□□□□ -0.64
BRCA1-205ENST00000461221 HOOK1Q9UJC3 728 aaKnown RBP11.05□□□□□ -0.64
BRCA1-205ENST00000461221 PCMTD1Q96MG8 357 aaPredicted RBP11.05□□□□□ -0.64
BRCA1-205ENST00000461221 PKD2Q13563 968 aa11.04□□□□□ -0.64
BRCA1-205ENST00000461221 TRIM29Q14134 588 aa11.04□□□□□ -0.64
BRCA1-205ENST00000461221 ACBD3Q9H3P7 528 aa11.04□□□□□ -0.64
BRCA1-205ENST00000461221 ARHGAP35Q9NRY4 1499 aa11.04□□□□□ -0.64
BRCA1-205ENST00000461221 FOXD4L5Q5VV16 416 aaPredicted RBP11.04□□□□□ -0.64
BRCA1-205ENST00000461221 FOXD4L4Q8WXT5 416 aaPredicted RBP11.04□□□□□ -0.64
BRCA1-205ENST00000461221 AK7Q96M32 723 aa11.04□□□□□ -0.64
BRCA1-205ENST00000461221 GGT6Q6P531 493 aa11.03□□□□□ -0.64
BRCA1-205ENST00000461221 NOL10Q9BSC4 688 aaKnown RBP11.03□□□□□ -0.64
BRCA1-205ENST00000461221 NOM1Q5C9Z4 860 aaKnown RBP11.03□□□□□ -0.64
BRCA1-205ENST00000461221 CTDP1Q9Y5B0 961 aaPredicted RBP11.03□□□□□ -0.64
BRCA1-205ENST00000461221 RUFY2Q8WXA3 655 aa11.02□□□□□ -0.64
BRCA1-205ENST00000461221 RUFY1Q96T51 708 aa11.02□□□□□ -0.64
BRCA1-205ENST00000461221 ZNF592Q92610 1267 aa11.02□□□□□ -0.65
BRCA1-205ENST00000461221 EIF4G1Q04637 1599 aaKnown RBP11.01□□□□□ -0.65
BRCA1-205ENST00000461221 ERCC6Q03468 1493 aa11.01□□□□□ -0.65
BRCA1-205ENST00000461221 TRHP20396 242 aaPredicted RBP11.01□□□□□ -0.65
BRCA1-205ENST00000461221 TRIM34Q9BYJ4 488 aa11.01□□□□□ -0.65
BRCA1-205ENST00000461221 AMPHP49418 695 aa11.01□□□□□ -0.65
BRCA1-205ENST00000461221 CENPQQ7L2Z9 268 aaPredicted RBP11.01□□□□□ -0.65
BRCA1-205ENST00000461221 CLUAP1Q96AJ1 413 aa11.01□□□□□ -0.65
BRCA1-205ENST00000461221 RILPL2Q969X0 211 aa11.01□□□□□ -0.65
BRCA1-205ENST00000461221 ARGLU1Q9NWB6 273 aaPredicted RBP11.01□□□□□ -0.65
BRCA1-205ENST00000461221 BAZ1BQ9UIG0 1483 aaKnown RBP11.01□□□□□ -0.65
BRCA1-205ENST00000461221 MCTP1Q6DN14 999 aa11.01□□□□□ -0.65
BRCA1-205ENST00000461221 WWC1Q8IX03 1113 aa11□□□□□ -0.65
BRCA1-205ENST00000461221 NLRP13Q86W25 1043 aa11□□□□□ -0.65
BRCA1-205ENST00000461221 DIAPH3Q9NSV4 1193 aa11□□□□□ -0.65
BRCA1-205ENST00000461221 HOMER1Q86YM7 354 aa11□□□□□ -0.65
BRCA1-205ENST00000461221 FAM161AQ3B820 660 aa11□□□□□ -0.65
BRCA1-205ENST00000461221 ANO8Q9HCE9 1232 aaPredicted RBP10.99□□□□□ -0.65
BRCA1-205ENST00000461221 ZKSCAN1P17029 563 aaPredicted RBP10.99□□□□□ -0.65
BRCA1-205ENST00000461221 GSE1Q14687 1217 aa10.99□□□□□ -0.65
BRCA1-205ENST00000461221 VSIG10Q8N0Z9 540 aa10.99□□□□□ -0.65
BRCA1-205ENST00000461221 NGDNQ8NEJ9 315 aaKnown RBP10.99□□□□□ -0.65
BRCA1-205ENST00000461221 EID1Q9Y6B2 187 aa10.98□□□□□ -0.65
BRCA1-205ENST00000461221 REC8O95072 547 aa10.98□□□□□ -0.65
BRCA1-205ENST00000461221 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.98□□□□□ -0.65
BRCA1-205ENST00000461221 CNKSR2Q8WXI2 1034 aa10.98□□□□□ -0.65
BRCA1-205ENST00000461221 DCTN1Q14203 1278 aa10.98□□□□□ -0.65
BRCA1-205ENST00000461221 FBXO3Q9UK99 471 aa10.98□□□□□ -0.65
BRCA1-205ENST00000461221 ANKRD30AQ9BXX3 1397 aa10.97□□□□□ -0.65
BRCA1-205ENST00000461221 CPLX1O14810 134 aa10.97□□□□□ -0.65
BRCA1-205ENST00000461221 CCDC146Q8IYE0 955 aa10.97□□□□□ -0.65
BRCA1-205ENST00000461221 ANKRD45Q5TZF3 282 aa10.97□□□□□ -0.65
BRCA1-205ENST00000461221 TSHZ2Q9NRE2 1034 aa10.97□□□□□ -0.65
BRCA1-205ENST00000461221 HSP90B2PQ58FF3 399 aa10.96□□□□□ -0.65
BRCA1-205ENST00000461221 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.96□□□□□ -0.65
BRCA1-205ENST00000461221 CCDC43Q96MW1 224 aaKnown RBP10.96□□□□□ -0.65
BRCA1-205ENST00000461221 CT47A1Q5JQC4 288 aaPredicted RBP10.96□□□□□ -0.66
BRCA1-205ENST00000461221 RNF20Q5VTR2 975 aa10.96□□□□□ -0.66
BRCA1-205ENST00000461221 CCDC191Q8NCU4 936 aa10.96□□□□□ -0.66
BRCA1-205ENST00000461221 MNS1Q8NEH6 495 aa10.96□□□□□ -0.66
BRCA1-205ENST00000461221 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.96□□□□□ -0.664e-6■■■■■ 85.3
BRCA1-205ENST00000461221 NUP155O75694 1391 aa10.96□□□□□ -0.66
BRCA1-205ENST00000461221 RDXP35241 583 aaKnown RBP10.96□□□□□ -0.66
BRCA1-205ENST00000461221 NEXNQ0ZGT2 675 aa10.96□□□□□ -0.66
BRCA1-205ENST00000461221 ODF2Q5BJF6 829 aa10.95□□□□□ -0.66
BRCA1-205ENST00000461221 C1orf141Q5JVX7 400 aa10.95□□□□□ -0.66
BRCA1-205ENST00000461221 BICD2Q8TD16 824 aa10.95□□□□□ -0.66
BRCA1-205ENST00000461221 CCDC173Q0VFZ6 552 aa10.95□□□□□ -0.66
BRCA1-205ENST00000461221 ZKSCAN2Q63HK3 967 aa10.95□□□□□ -0.66
BRCA1-205ENST00000461221 ANO2Q9NQ90 1003 aa10.95□□□□□ -0.66
BRCA1-205ENST00000461221 KIF15Q9NS87 1388 aa10.95□□□□□ -0.66
BRCA1-205ENST00000461221 RB1CC1Q8TDY2 1594 aa10.95□□□□□ -0.66
BRCA1-205ENST00000461221 TRDNQ13061 729 aa10.95□□□□□ -0.66
BRCA1-205ENST00000461221 CARMIL2Q6F5E8 1435 aa10.95□□□□□ -0.66
BRCA1-205ENST00000461221 MPHOSPH9Q99550 1183 aa10.95□□□□□ -0.66
BRCA1-205ENST00000461221 SASS6Q6UVJ0 657 aa10.94□□□□□ -0.66
BRCA1-205ENST00000461221 MYO6Q9UM54 1294 aa10.94□□□□□ -0.66
BRCA1-205ENST00000461221 ERCC4Q92889 916 aaPredicted RBP10.94□□□□□ -0.66
BRCA1-205ENST00000461221 CARMIL1Q5VZK9 1371 aa10.94□□□□□ -0.66
BRCA1-205ENST00000461221 ERICH2A1L162 156 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms