RNA–Protein interactions for RNA: ENST00000443816.5

FN1-211, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,762 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-211ENST00000443816 APBB1O00213 710 aa14.09□□□□□ -0.15
FN1-211ENST00000443816 PSME1Q06323 249 aa14.09□□□□□ -0.15
FN1-211ENST00000443816 COG3Q96JB2 828 aa14.09□□□□□ -0.15
FN1-211ENST00000443816 PHLDB1Q86UU1 1377 aa14.09□□□□□ -0.15
FN1-211ENST00000443816 RWDD1Q9H446 243 aaPredicted RBP14.09□□□□□ -0.15
FN1-211ENST00000443816 ATF3P18847 181 aa14.08□□□□□ -0.16
FN1-211ENST00000443816 KANK4Q5T7N3 995 aaPredicted RBP14.08□□□□□ -0.16
FN1-211ENST00000443816 FGD5Q6ZNL6 1462 aa14.08□□□□□ -0.16
FN1-211ENST00000443816 TRAK1Q9UPV9 953 aa14.08□□□□□ -0.16
FN1-211ENST00000443816 DCAF8L1A6NGE4 600 aa14.08□□□□□ -0.16
FN1-211ENST00000443816 PMFBP1Q8TBY8 1022 aa14.08□□□□□ -0.16
FN1-211ENST00000443816 MSH5O43196 834 aa14.07□□□□□ -0.16
FN1-211ENST00000443816 SMC4Q9NTJ3 1288 aa14.07□□□□□ -0.16
FN1-211ENST00000443816 PTMSP20962 102 aa14.07□□□□□ -0.16
FN1-211ENST00000443816 CGNL1Q0VF96 1302 aa14.06□□□□□ -0.16
FN1-211ENST00000443816 ARHGAP5Q13017 1502 aa14.06□□□□□ -0.16
FN1-211ENST00000443816 TRIM6-TRIM34B2RNG4 842 aa14.05□□□□□ -0.16
FN1-211ENST00000443816 DRC7Q8IY82 874 aa14.05□□□□□ -0.16
FN1-211ENST00000443816 CC2D2AQ9P2K1 1620 aa14.05□□□□□ -0.16
FN1-211ENST00000443816 SLC4A10Q6U841 1118 aa14.05□□□□□ -0.16
FN1-211ENST00000443816 LRRFIP1Q32MZ4 808 aaKnown RBP14.03□□□□□ -0.16
FN1-211ENST00000443816 TTC5Q8N0Z6 440 aa14.03□□□□□ -0.16
FN1-211ENST00000443816 RCAN3Q9UKA8 241 aa14.03□□□□□ -0.16
FN1-211ENST00000443816 NOL10Q9BSC4 688 aaKnown RBP14.03□□□□□ -0.16
FN1-211ENST00000443816 HSP90B1P14625 803 aaKnown RBP14.02□□□□□ -0.16
FN1-211ENST00000443816 KIF15Q9NS87 1388 aa14.02□□□□□ -0.17
FN1-211ENST00000443816 TRIM34Q9BYJ4 488 aa14.02□□□□□ -0.17
FN1-211ENST00000443816 AMOTL1Q8IY63 956 aa14.02□□□□□ -0.17
FN1-211ENST00000443816 TEFQ10587 303 aa14.01□□□□□ -0.17
FN1-211ENST00000443816 PHF23Q9BUL5 403 aaPredicted RBP14.01□□□□□ -0.17
FN1-211ENST00000443816 B4GALNT3Q6L9W6 998 aa14.01□□□□□ -0.17
FN1-211ENST00000443816 TPM4P67936 248 aa14.01□□□□□ -0.17
FN1-211ENST00000443816 NEXNQ0ZGT2 675 aa14□□□□□ -0.17
FN1-211ENST00000443816 CSPP1Q1MSJ5 1256 aa14□□□□□ -0.17
FN1-211ENST00000443816 KIF3AQ9Y496 699 aa13.99□□□□□ -0.17
FN1-211ENST00000443816 NLRP13Q86W25 1043 aa13.98□□□□□ -0.17
FN1-211ENST00000443816 MYOM3Q5VTT5 1437 aa13.98□□□□□ -0.17
FN1-211ENST00000443816 ERICH6BQ5W0A0 696 aa13.98□□□□□ -0.17
FN1-211ENST00000443816 GRIN2BQ13224 1484 aa13.98□□□□□ -0.17
FN1-211ENST00000443816 KIF21BO75037 1637 aa13.98□□□□□ -0.17
FN1-211ENST00000443816 CHMP4CQ96CF2 233 aa13.98□□□□□ -0.17
FN1-211ENST00000443816 SYAP1Q96A49 352 aaPredicted RBP13.98□□□□□ -0.17
FN1-211ENST00000443816 MIA2Q96PC5 1412 aa13.98□□□□□ -0.17
FN1-211ENST00000443816 SYTL4Q96C24 671 aaPredicted RBP13.97□□□□□ -0.17
FN1-211ENST00000443816 WASHC2AQ641Q2 1341 aa13.97□□□□□ -0.17
FN1-211ENST00000443816 GBP4Q96PP9 640 aa13.97□□□□□ -0.17
FN1-211ENST00000443816 SUPT6HQ7KZ85 1726 aaKnown RBP13.97□□□□□ -0.17
FN1-211ENST00000443816 SYNJ2O15056 1496 aa13.97□□□□□ -0.17
FN1-211ENST00000443816 VPS53Q5VIR6 699 aa13.97□□□□□ -0.17
FN1-211ENST00000443816 RASSF8Q8NHQ8 419 aa13.97□□□□□ -0.17
FN1-211ENST00000443816 CENPJQ9HC77 1338 aaPredicted RBP13.96□□□□□ -0.17
FN1-211ENST00000443816 MARCH6O60337 910 aa13.96□□□□□ -0.17
FN1-211ENST00000443816 L3MBTL2Q969R5 705 aa13.96□□□□□ -0.17
FN1-211ENST00000443816 MRC2Q9UBG0 1479 aa13.96□□□□□ -0.18
FN1-211ENST00000443816 CTDP1Q9Y5B0 961 aaPredicted RBP13.96□□□□□ -0.18
FN1-211ENST00000443816 VPS37DQ86XT2 251 aa13.95□□□□□ -0.18
FN1-211ENST00000443816 NOP58Q9Y2X3 529 aaKnown RBP13.95□□□□□ -0.18
FN1-211ENST00000443816 DHX57Q6P158 1386 aaKnown RBP13.95□□□□□ -0.18
FN1-211ENST00000443816 MINK1Q8N4C8 1332 aaPredicted RBP13.94□□□□□ -0.18
FN1-211ENST00000443816 DDX58O95786 925 aaKnown RBP13.94□□□□□ -0.18
FN1-211ENST00000443816 TOMM22Q9NS69 142 aa13.94□□□□□ -0.18
FN1-211ENST00000443816 CCDC146Q8IYE0 955 aa13.94□□□□□ -0.18
FN1-211ENST00000443816 TCEAL9Q9UHQ7 104 aa13.94□□□□□ -0.18
FN1-211ENST00000443816 MSNP26038 577 aaKnown RBP13.93□□□□□ -0.18
FN1-211ENST00000443816 RAD54L2Q9Y4B4 1467 aa13.93□□□□□ -0.18
FN1-211ENST00000443816 NOC3LQ8WTT2 800 aaKnown RBP13.92□□□□□ -0.18
FN1-211ENST00000443816 STAC3Q96MF2 364 aa13.92□□□□□ -0.18
FN1-211ENST00000443816 PDE3BQ13370 1112 aa13.92□□□□□ -0.18
FN1-211ENST00000443816 HECW1Q76N89 1606 aa13.92□□□□□ -0.18
FN1-211ENST00000443816 AKAP17AQ02040 695 aaKnown RBP13.92□□□□□ -0.18
FN1-211ENST00000443816 C9orf78Q9NZ63 289 aaPredicted RBP13.92□□□□□ -0.18
FN1-211ENST00000443816 KIF16BQ96L93 1317 aa13.91□□□□□ -0.18
FN1-211ENST00000443816 RRBP1Q9P2E9 1410 aaKnown RBP13.91□□□□□ -0.18
FN1-211ENST00000443816 SPRYD3Q8NCJ5 442 aa13.91□□□□□ -0.18
FN1-211ENST00000443816 ROCK1Q13464 1354 aa13.9□□□□□ -0.18
FN1-211ENST00000443816 MYBBP1AQ9BQG0 1328 aaKnown RBP13.9□□□□□ -0.18
FN1-211ENST00000443816 PRM3Q9NNZ6 103 aa13.9□□□□□ -0.18
FN1-211ENST00000443816 PANK3Q9H999 370 aa13.9□□□□□ -0.18
FN1-211ENST00000443816 RAPGEF4Q8WZA2 1011 aa13.89□□□□□ -0.19
FN1-211ENST00000443816 SYNE3Q6ZMZ3 975 aa13.89□□□□□ -0.19
FN1-211ENST00000443816 IFT140Q96RY7 1462 aa13.88□□□□□ -0.19
FN1-211ENST00000443816 ST18O60284 1047 aa13.88□□□□□ -0.19
FN1-211ENST00000443816 GPRASP1Q5JY77 1395 aa13.88□□□□□ -0.19
FN1-211ENST00000443816 CWC22Q9HCG8 908 aaKnown RBP13.88□□□□□ -0.19
FN1-211ENST00000443816 AQRO60306 1485 aaKnown RBP eCLIP13.88□□□□□ -0.199e-12■■■■■ 26.9
FN1-211ENST00000443816 SF3B2Q13435 895 aaKnown RBP13.88□□□□□ -0.19
FN1-211ENST00000443816 NGEFQ8N5V2 710 aa13.88□□□□□ -0.19
FN1-211ENST00000443816 NCAPD3P42695 1498 aa13.87□□□□□ -0.19
FN1-211ENST00000443816 ST20-MTHFSA0A0A6YYL1 179 aa13.87□□□□□ -0.19
FN1-211ENST00000443816 CEP89Q96ST8 783 aa13.87□□□□□ -0.19
FN1-211ENST00000443816 ANO8Q9HCE9 1232 aaPredicted RBP13.87□□□□□ -0.19
FN1-211ENST00000443816 FYCO1Q9BQS8 1478 aa13.87□□□□□ -0.19
FN1-211ENST00000443816 POGZQ7Z3K3 1410 aa13.87□□□□□ -0.19
FN1-211ENST00000443816 UNC13AQ9UPW8 1703 aa13.87□□□□□ -0.19
FN1-211ENST00000443816 TCERG1O14776 1098 aaKnown RBP13.87□□□□□ -0.19
FN1-211ENST00000443816 RBM33Q96EV2 1170 aaKnown RBP13.87□□□□□ -0.19
FN1-211ENST00000443816 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.87□□□□□ -0.19
FN1-211ENST00000443816 PLEKHH2Q8IVE3 1493 aa13.86□□□□□ -0.19
FN1-211ENST00000443816 SMG6Q86US8 1419 aaKnown RBP13.86□□□□□ -0.19
FN1-211ENST00000443816 USP47Q96K76 1375 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms