RNA–Protein interactions for RNA: ENST00000443128.6

CCDC113-202, Transcript of coiled-coil domain containing 113, humanhuman

TSL 2 BASIC

Gene CCDC113, Length 5,110 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-202ENST00000443128 NAIPQ13075 1403 aa11.35□□□□□ -0.59
CCDC113-202ENST00000443128 U2AF1L5P0DN76 240 aaPredicted RBP11.35□□□□□ -0.59
CCDC113-202ENST00000443128 U2AF1Q01081 240 aaKnown RBP eCLIP11.35□□□□□ -0.59
CCDC113-202ENST00000443128 HSP90AA1P07900 732 aaKnown RBP11.35□□□□□ -0.59
CCDC113-202ENST00000443128 SCAPERQ9BY12 1400 aa11.34□□□□□ -0.59
CCDC113-202ENST00000443128 ADAMTS12P58397 1594 aa11.34□□□□□ -0.59
CCDC113-202ENST00000443128 B4GALNT3Q6L9W6 998 aa11.34□□□□□ -0.59
CCDC113-202ENST00000443128 ABCA5Q8WWZ7 1642 aa11.34□□□□□ -0.59
CCDC113-202ENST00000443128 KIAA1107Q9UPP5 1409 aa11.33□□□□□ -0.6
CCDC113-202ENST00000443128 MYBBP1AQ9BQG0 1328 aaKnown RBP11.33□□□□□ -0.6
CCDC113-202ENST00000443128 PTPN23Q9H3S7 1636 aa11.33□□□□□ -0.6
CCDC113-202ENST00000443128 PAK3O75914 559 aaPredicted RBP11.32□□□□□ -0.6
CCDC113-202ENST00000443128 KIF7Q2M1P5 1343 aa11.32□□□□□ -0.6
CCDC113-202ENST00000443128 NUTM2FA1L443 756 aa11.31□□□□□ -0.6
CCDC113-202ENST00000443128 CAMSAP2Q08AD1 1489 aa11.31□□□□□ -0.6
CCDC113-202ENST00000443128 ROCK1Q13464 1354 aa11.31□□□□□ -0.6
CCDC113-202ENST00000443128 CCDC7Q96M83 1385 aa11.31□□□□□ -0.6
CCDC113-202ENST00000443128 RAPGEF3O95398 923 aa11.3□□□□□ -0.6
CCDC113-202ENST00000443128 STAC3Q96MF2 364 aa11.3□□□□□ -0.6
CCDC113-202ENST00000443128 EVC2Q86UK5 1308 aa11.3□□□□□ -0.6
CCDC113-202ENST00000443128 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.3□□□□□ -0.6
CCDC113-202ENST00000443128 ABCC5O15440 1437 aa11.3□□□□□ -0.6
CCDC113-202ENST00000443128 KIF14Q15058 1648 aa11.3□□□□□ -0.6
CCDC113-202ENST00000443128 CCDC146Q8IYE0 955 aa11.29□□□□□ -0.6
CCDC113-202ENST00000443128 MINK1Q8N4C8 1332 aaPredicted RBP11.29□□□□□ -0.6
CCDC113-202ENST00000443128 NUP153P49790 1475 aaKnown RBP11.29□□□□□ -0.6
CCDC113-202ENST00000443128 NUP160Q12769 1436 aa11.29□□□□□ -0.6
CCDC113-202ENST00000443128 RCAN3Q9UKA8 241 aa11.29□□□□□ -0.6
CCDC113-202ENST00000443128 ATP10BO94823 1461 aa11.29□□□□□ -0.6
CCDC113-202ENST00000443128 CCDC141Q6ZP82 1450 aa11.28□□□□□ -0.6
CCDC113-202ENST00000443128 WASHC2AQ641Q2 1341 aa11.28□□□□□ -0.6
CCDC113-202ENST00000443128 THOC2Q8NI27 1593 aaKnown RBP11.28□□□□□ -0.6
CCDC113-202ENST00000443128 NBPF8Q3BBV2 869 aa11.28□□□□□ -0.6
CCDC113-202ENST00000443128 DISP1Q96F81 1524 aa11.28□□□□□ -0.6
CCDC113-202ENST00000443128 NGDNQ8NEJ9 315 aaKnown RBP11.27□□□□□ -0.6
CCDC113-202ENST00000443128 MS4A1P11836 297 aa11.27□□□□□ -0.6
CCDC113-202ENST00000443128 RGS3P49796 1198 aa11.27□□□□□ -0.61
CCDC113-202ENST00000443128 UGGT2Q9NYU1 1516 aa11.27□□□□□ -0.61
CCDC113-202ENST00000443128 CENPJQ9HC77 1338 aaPredicted RBP11.27□□□□□ -0.61
CCDC113-202ENST00000443128 CTTNBP2Q8WZ74 1663 aa11.26□□□□□ -0.61
CCDC113-202ENST00000443128 CFAP70Q5T0N1 1121 aa11.25□□□□□ -0.61
CCDC113-202ENST00000443128 TMEM132EQ6IEE7 984 aa11.25□□□□□ -0.61
CCDC113-202ENST00000443128 RTF1Q92541 710 aaKnown RBP11.25□□□□□ -0.61
CCDC113-202ENST00000443128 CGNL1Q0VF96 1302 aa11.25□□□□□ -0.61
CCDC113-202ENST00000443128 NBPF1Q3BBV0 1214 aa11.25□□□□□ -0.61
CCDC113-202ENST00000443128 CNTLNQ9NXG0 1405 aa11.25□□□□□ -0.61
CCDC113-202ENST00000443128 GOLGA2Q08379 1002 aa11.25□□□□□ -0.61
CCDC113-202ENST00000443128 ARXQ96QS3 562 aa11.25□□□□□ -0.61
CCDC113-202ENST00000443128 PTPRKQ15262 1439 aa11.25□□□□□ -0.61
CCDC113-202ENST00000443128 AKNAQ7Z591 1439 aa11.24□□□□□ -0.61
CCDC113-202ENST00000443128 RAPGEF6Q8TEU7 1601 aa11.24□□□□□ -0.61
CCDC113-202ENST00000443128 PBRM1Q86U86 1689 aa11.23□□□□□ -0.61
CCDC113-202ENST00000443128 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.23□□□□□ -0.61
CCDC113-202ENST00000443128 CHMP4BQ9H444 224 aaKnown RBP11.23□□□□□ -0.61
CCDC113-202ENST00000443128 WDR97A6NE52 1622 aa11.23□□□□□ -0.61
CCDC113-202ENST00000443128 CD109Q6YHK3 1445 aa11.23□□□□□ -0.61
CCDC113-202ENST00000443128 NBR1Q14596 966 aa11.23□□□□□ -0.61
CCDC113-202ENST00000443128 PDE3BQ13370 1112 aa11.22□□□□□ -0.61
CCDC113-202ENST00000443128 NCOA1Q15788 1441 aa11.22□□□□□ -0.61
CCDC113-202ENST00000443128 CALD1Q05682 793 aaKnown RBP11.22□□□□□ -0.61
CCDC113-202ENST00000443128 KIAA0556O60303 1618 aa11.21□□□□□ -0.61
CCDC113-202ENST00000443128 GPATCH8Q9UKJ3 1502 aaKnown RBP11.21□□□□□ -0.61
CCDC113-202ENST00000443128 RRP7AQ9Y3A4 280 aaKnown RBP11.21□□□□□ -0.62
CCDC113-202ENST00000443128 ERICH6BQ5W0A0 696 aa11.21□□□□□ -0.62
CCDC113-202ENST00000443128 ADGRL1O94910 1474 aa11.2□□□□□ -0.62
CCDC113-202ENST00000443128 CEP170Q5SW79 1584 aa11.2□□□□□ -0.62
CCDC113-202ENST00000443128 DDRGK1Q96HY6 314 aa11.2□□□□□ -0.62
CCDC113-202ENST00000443128 ZBED9Q6R2W3 1325 aa11.2□□□□□ -0.62
CCDC113-202ENST00000443128 ANKRD30BQ9BXX2 1392 aa11.2□□□□□ -0.62
CCDC113-202ENST00000443128 AMPHP49418 695 aa11.2□□□□□ -0.62
CCDC113-202ENST00000443128 COG3Q96JB2 828 aa11.19□□□□□ -0.62
CCDC113-202ENST00000443128 CSB-PGBD3P0DP91 1061 aa11.18□□□□□ -0.62
CCDC113-202ENST00000443128 CABP2Q9NPB3 220 aa11.18□□□□□ -0.62
CCDC113-202ENST00000443128 IPO8O15397 1037 aaKnown RBP11.18□□□□□ -0.62
CCDC113-202ENST00000443128 BECN1Q14457 450 aa11.18□□□□□ -0.62
CCDC113-202ENST00000443128 LTV1Q96GA3 475 aaPredicted RBP11.17□□□□□ -0.62
CCDC113-202ENST00000443128 ERBINQ96RT1 1412 aa11.17□□□□□ -0.62
CCDC113-202ENST00000443128 SLC52A1Q9NWF4 448 aa11.17□□□□□ -0.62
CCDC113-202ENST00000443128 SMC4Q9NTJ3 1288 aa11.16□□□□□ -0.62
CCDC113-202ENST00000443128 APAF1O14727 1248 aa11.16□□□□□ -0.62
CCDC113-202ENST00000443128 FANCAO15360 1455 aa11.15□□□□□ -0.62
CCDC113-202ENST00000443128 CASC1Q6TDU7 716 aa11.15□□□□□ -0.62
CCDC113-202ENST00000443128 ITPRIPQ8IWB1 547 aa11.15□□□□□ -0.62
CCDC113-202ENST00000443128 SAMD9Q5K651 1589 aa11.14□□□□□ -0.63
CCDC113-202ENST00000443128 CLUAP1Q96AJ1 413 aa11.14□□□□□ -0.63
CCDC113-202ENST00000443128 LMOD3Q0VAK6 560 aa11.14□□□□□ -0.63
CCDC113-202ENST00000443128 OS9Q13438 667 aaPredicted RBP11.14□□□□□ -0.63
CCDC113-202ENST00000443128 GGNBP2Q9H3C7 697 aa11.13□□□□□ -0.63
CCDC113-202ENST00000443128 CFAP43Q8NDM7 1665 aa11.13□□□□□ -0.63
CCDC113-202ENST00000443128 PRAM1Q96QH2 718 aa11.13□□□□□ -0.63
CCDC113-202ENST00000443128 ASXL2Q76L83 1435 aa11.12□□□□□ -0.63
CCDC113-202ENST00000443128 TXNDC2Q86VQ3 553 aa11.12□□□□□ -0.63
CCDC113-202ENST00000443128 MAGI3Q5TCQ9 1506 aa11.12□□□□□ -0.63
CCDC113-202ENST00000443128 DIAPH1O60610 1272 aaKnown RBP11.12□□□□□ -0.63
CCDC113-202ENST00000443128 E9PSI1 815 aa11.12□□□□□ -0.63
CCDC113-202ENST00000443128 BRD4O60885 1362 aaPredicted RBP11.11□□□□□ -0.63
CCDC113-202ENST00000443128 PLIN1O60240 522 aa11.11□□□□□ -0.63
CCDC113-202ENST00000443128 RPGRIP1LQ68CZ1 1315 aa11.11□□□□□ -0.63
CCDC113-202ENST00000443128 PLCH2O75038 1416 aa11.11□□□□□ -0.63
CCDC113-202ENST00000443128 STK31Q9BXU1 1019 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms