RNA–Protein interactions for RNA: ENST00000442985.1

SPEN-203, Transcript of spen family transcriptional repressor, humanhuman

TSL 5

Gene SPEN, Length 891 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-203ENST00000442985 TARBP1Q13395 1621 aaKnown RBP8.87□□□□□ -0.99
SPEN-203ENST00000442985 PDIA6Q15084 440 aa8.85□□□□□ -0.99
SPEN-203ENST00000442985 POLA1P09884 1462 aaPredicted RBP8.84□□□□□ -0.99
SPEN-203ENST00000442985 PSDA5PKW4 1024 aaPredicted RBP8.84□□□□□ -0.99
SPEN-203ENST00000442985 HOXB3P14651 431 aaPredicted RBP8.84□□□□□ -0.99
SPEN-203ENST00000442985 ABCC8Q09428 1581 aa8.84□□□□□ -0.99
SPEN-203ENST00000442985 UPF1Q92900 1129 aaKnown RBP eCLIP8.84□□□□□ -0.994e-12■□□□□ 8.6
SPEN-203ENST00000442985 EMILIN3Q9NT22 766 aa8.84□□□□□ -0.99
SPEN-203ENST00000442985 PCDHGA4Q9Y5G9 962 aa8.84□□□□□ -0.99
SPEN-203ENST00000442985 RAD54L2Q9Y4B4 1467 aa8.83□□□□□ -1
SPEN-203ENST00000442985 DPYSL4O14531 572 aa8.82□□□□□ -1
SPEN-203ENST00000442985 SMYD5Q6GMV2 418 aa8.82□□□□□ -1
SPEN-203ENST00000442985 CYB5RLQ6IPT4 315 aa8.82□□□□□ -1
SPEN-203ENST00000442985 ARAP1Q96P48 1450 aa8.82□□□□□ -1
SPEN-203ENST00000442985 HOXB1P14653 301 aaPredicted RBP8.8□□□□□ -1
SPEN-203ENST00000442985 TDRD9Q8NDG6 1382 aaKnown RBP8.8□□□□□ -1
SPEN-203ENST00000442985 EVI5O60447 810 aa8.79□□□□□ -1
SPEN-203ENST00000442985 FGD5Q6ZNL6 1462 aa8.78□□□□□ -1
SPEN-203ENST00000442985 SNAPC4Q5SXM2 1469 aa8.77□□□□□ -1
SPEN-203ENST00000442985 PTGER2P43116 358 aa8.77□□□□□ -1.01
SPEN-203ENST00000442985 GPR153Q6NV75 609 aa8.77□□□□□ -1.01
SPEN-203ENST00000442985 SOGA1O94964 1423 aa8.77□□□□□ -1.01
SPEN-203ENST00000442985 CUX1P39880 1505 aa8.76□□□□□ -1.01
SPEN-203ENST00000442985 ANO8Q9HCE9 1232 aaPredicted RBP8.76□□□□□ -1.01
SPEN-203ENST00000442985 CLASP1Q7Z460 1538 aa8.75□□□□□ -1.01
SPEN-203ENST00000442985 ARSIQ5FYB1 569 aa8.75□□□□□ -1.01
SPEN-203ENST00000442985 FBXW7Q969H0 707 aa8.74□□□□□ -1.01
SPEN-203ENST00000442985 JPH4Q96JJ6 628 aa8.74□□□□□ -1.01
SPEN-203ENST00000442985 EPAS1Q99814 870 aa8.74□□□□□ -1.01
SPEN-203ENST00000442985 NUDT7P0C024 238 aa8.73□□□□□ -1.01
SPEN-203ENST00000442985 WDR97A6NE52 1622 aa8.72□□□□□ -1.01
SPEN-203ENST00000442985 TESPA1A2RU30 521 aaPredicted RBP8.72□□□□□ -1.01
SPEN-203ENST00000442985 ST18O60284 1047 aa8.72□□□□□ -1.01
SPEN-203ENST00000442985 PHF14O94880 888 aa8.72□□□□□ -1.01
SPEN-203ENST00000442985 EMP3P54852 163 aa8.72□□□□□ -1.01
SPEN-203ENST00000442985 PPP4R3BQ5MIZ7 849 aa8.72□□□□□ -1.01
SPEN-203ENST00000442985 KCNH8Q96L42 1107 aa8.72□□□□□ -1.01
SPEN-203ENST00000442985 SYNJ1O43426 1573 aa8.71□□□□□ -1.02
SPEN-203ENST00000442985 KDM4FA0A1W2PPD8 638 aa8.71□□□□□ -1.02
SPEN-203ENST00000442985 FAM163AQ96GL9 167 aaPredicted RBP8.71□□□□□ -1.02
SPEN-203ENST00000442985 GRIN2BQ13224 1484 aa8.7□□□□□ -1.02
SPEN-203ENST00000442985 MAGI1Q96QZ7 1491 aaPredicted RBP8.7□□□□□ -1.02
SPEN-203ENST00000442985 PBRM1Q86U86 1689 aa8.7□□□□□ -1.02
SPEN-203ENST00000442985 TYW1BQ6NUM6 668 aa8.7□□□□□ -1.02
SPEN-203ENST00000442985 CHMP7Q8WUX9 453 aaPredicted RBP8.7□□□□□ -1.02
SPEN-203ENST00000442985 SYNJ2O15056 1496 aa8.7□□□□□ -1.02
SPEN-203ENST00000442985 ERBB3P21860 1342 aa8.69□□□□□ -1.02
SPEN-203ENST00000442985 SEMA3EO15041 775 aa8.68□□□□□ -1.02
SPEN-203ENST00000442985 FOSBP53539 338 aa8.68□□□□□ -1.02
SPEN-203ENST00000442985 GAPVD1Q14C86 1478 aa8.67□□□□□ -1.02
SPEN-203ENST00000442985 ZNF454Q8N9F8 522 aa8.67□□□□□ -1.02
SPEN-203ENST00000442985 ABCA5Q8WWZ7 1642 aa8.66□□□□□ -1.02
SPEN-203ENST00000442985 PBX2P40425 430 aa8.66□□□□□ -1.02
SPEN-203ENST00000442985 ZDHHC16Q969W1 377 aa8.66□□□□□ -1.02
SPEN-203ENST00000442985 LHX6Q9UPM6 363 aa8.66□□□□□ -1.02
SPEN-203ENST00000442985 GRXCR2A6NFK2 248 aa8.65□□□□□ -1.02
SPEN-203ENST00000442985 DDX12PQ92771 950 aa8.65□□□□□ -1.02
SPEN-203ENST00000442985 ERCC6L2Q5T890 1561 aa8.65□□□□□ -1.03
SPEN-203ENST00000442985 ABCA10Q8WWZ4 1543 aa8.64□□□□□ -1.03
SPEN-203ENST00000442985 CERKQ8TCT0 537 aa8.64□□□□□ -1.03
SPEN-203ENST00000442985 KHSRPQ92945 711 aaKnown RBP eCLIP8.64□□□□□ -1.036e-7■■□□□ 11.8
SPEN-203ENST00000442985 EN1Q05925 392 aaPredicted RBP8.63□□□□□ -1.03
SPEN-203ENST00000442985 PCDHGA10Q9Y5H3 936 aa8.63□□□□□ -1.03
SPEN-203ENST00000442985 SUPT5HO00267 1087 aaKnown RBP8.62□□□□□ -1.03
SPEN-203ENST00000442985 MAP3K7O43318 606 aa8.62□□□□□ -1.03
SPEN-203ENST00000442985 VARS2Q5ST30 1063 aaKnown RBP8.62□□□□□ -1.03
SPEN-203ENST00000442985 BCL2L12Q9HB09 334 aa8.62□□□□□ -1.03
SPEN-203ENST00000442985 ADAMTS12P58397 1594 aa8.61□□□□□ -1.03
SPEN-203ENST00000442985 CEP170Q5SW79 1584 aa8.61□□□□□ -1.03
SPEN-203ENST00000442985 PTPREP23469 700 aa8.61□□□□□ -1.03
SPEN-203ENST00000442985 MLLT3P42568 568 aaPredicted RBP8.61□□□□□ -1.03
SPEN-203ENST00000442985 MARVELD3Q96A59 401 aa8.61□□□□□ -1.03
SPEN-203ENST00000442985 GRIN2AQ12879 1464 aa8.61□□□□□ -1.03
SPEN-203ENST00000442985 OSBPP22059 807 aa8.6□□□□□ -1.03
SPEN-203ENST00000442985 FAM205CA6NFA0 338 aa8.59□□□□□ -1.03
SPEN-203ENST00000442985 LMOD2Q6P5Q4 547 aa8.59□□□□□ -1.03
SPEN-203ENST00000442985 GPIHBP1Q8IV16 184 aa8.59□□□□□ -1.03
SPEN-203ENST00000442985 ZNF687Q8N1G0 1237 aa8.59□□□□□ -1.03
SPEN-203ENST00000442985 NUP160Q12769 1436 aa8.58□□□□□ -1.04
SPEN-203ENST00000442985 WRNQ14191 1432 aaPredicted RBP eCLIP8.58□□□□□ -1.04
SPEN-203ENST00000442985 PRKCSHP14314 528 aaPredicted RBP8.58□□□□□ -1.04
SPEN-203ENST00000442985 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.58□□□□□ -1.04
SPEN-203ENST00000442985 HS3ST6Q96QI5 342 aa8.58□□□□□ -1.04
SPEN-203ENST00000442985 TOP2BQ02880 1626 aa8.58□□□□□ -1.04
SPEN-203ENST00000442985 BIVM-ERCC5R4GMW8 1640 aa8.58□□□□□ -1.04
SPEN-203ENST00000442985 SHROOM2Q13796 1616 aa8.56□□□□□ -1.04
SPEN-203ENST00000442985 PPP1R3GB7ZBB8 358 aa8.56□□□□□ -1.04
SPEN-203ENST00000442985 FCHSD2O94868 740 aa8.56□□□□□ -1.04
SPEN-203ENST00000442985 LCE2DQ5TA82 110 aaPredicted RBP8.56□□□□□ -1.04
SPEN-203ENST00000442985 RBM27Q9P2N5 1060 aaKnown RBP8.56□□□□□ -1.04
SPEN-203ENST00000442985 NUTM2FA1L443 756 aa8.55□□□□□ -1.04
SPEN-203ENST00000442985 ARHGAP33O14559 1287 aa8.55□□□□□ -1.04
SPEN-203ENST00000442985 C6orf132Q5T0Z8 1188 aa8.55□□□□□ -1.04
SPEN-203ENST00000442985 ADAM33Q9BZ11 813 aa8.55□□□□□ -1.04
SPEN-203ENST00000442985 FHAD1B1AJZ9 1412 aa8.54□□□□□ -1.04
SPEN-203ENST00000442985 RBM33Q96EV2 1170 aaKnown RBP8.54□□□□□ -1.04
SPEN-203ENST00000442985 HIC1Q14526 733 aa8.53□□□□□ -1.04
SPEN-203ENST00000442985 KCNK17Q96T54 332 aa8.53□□□□□ -1.04
SPEN-203ENST00000442985 ERICH3Q5RHP9 1530 aa8.53□□□□□ -1.04
SPEN-203ENST00000442985 RBM26Q5T8P6 1007 aaKnown RBP8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms