RNA–Protein interactions for RNA: ENST00000438508.1

HMGN1P6-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 6, humanhuman

BASIC

Gene HMGN1P6, Length 291 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P6-201ENST00000438508 LAPTM4BQ86VI4 370 aa12.19□□□□□ -0.46
HMGN1P6-201ENST00000438508 ZDHHC16Q969W1 377 aa12.19□□□□□ -0.46
HMGN1P6-201ENST00000438508 ADAM33Q9BZ11 813 aa12.17□□□□□ -0.46
HMGN1P6-201ENST00000438508 NRG2O14511 850 aaPredicted RBP12.16□□□□□ -0.46
HMGN1P6-201ENST00000438508 SMARCA4P51532 1647 aa12.15□□□□□ -0.47
HMGN1P6-201ENST00000438508 PPP1R3GB7ZBB8 358 aa12.14□□□□□ -0.47
HMGN1P6-201ENST00000438508 BCAMP50895 628 aa12.14□□□□□ -0.47
HMGN1P6-201ENST00000438508 UPF1Q92900 1129 aaKnown RBP eCLIP12.14□□□□□ -0.47
HMGN1P6-201ENST00000438508 WIZO95785 1651 aa12.12□□□□□ -0.47
HMGN1P6-201ENST00000438508 WBP1LQ9NX94 342 aa12.1□□□□□ -0.47
HMGN1P6-201ENST00000438508 ECM2O94769 699 aaPredicted RBP12.09□□□□□ -0.47
HMGN1P6-201ENST00000438508 ZNF787Q6DD87 383 aa12.09□□□□□ -0.47
HMGN1P6-201ENST00000438508 ZFRQ96KR1 1074 aaKnown RBP12.08□□□□□ -0.48
HMGN1P6-201ENST00000438508 ONECUT3O60422 494 aaPredicted RBP12.07□□□□□ -0.48
HMGN1P6-201ENST00000438508 ZNF775Q96BV0 537 aaPredicted RBP12.06□□□□□ -0.48
HMGN1P6-201ENST00000438508 CRISPLD2Q9H0B8 497 aa12.06□□□□□ -0.48
HMGN1P6-201ENST00000438508 PEG3Q9GZU2 1588 aa12.05□□□□□ -0.48
HMGN1P6-201ENST00000438508 RGL2O15211 777 aa12.05□□□□□ -0.48
HMGN1P6-201ENST00000438508 EVI5O60447 810 aa12.05□□□□□ -0.48
HMGN1P6-201ENST00000438508 PROX2Q3B8N5 592 aa12.05□□□□□ -0.48
HMGN1P6-201ENST00000438508 V9GY48 417 aaPredicted RBP12.04□□□□□ -0.48
HMGN1P6-201ENST00000438508 PPP1R15BQ5SWA1 713 aa12.02□□□□□ -0.49
HMGN1P6-201ENST00000438508 PRKD2Q9BZL6 878 aa12.01□□□□□ -0.49
HMGN1P6-201ENST00000438508 TSR3Q9UJK0 312 aaKnown RBP12.01□□□□□ -0.49
HMGN1P6-201ENST00000438508 TOP2AP11388 1531 aaKnown RBP12.01□□□□□ -0.49
HMGN1P6-201ENST00000438508 COL9A1P20849 921 aa12□□□□□ -0.49
HMGN1P6-201ENST00000438508 KIAA1468Q9P260 1216 aa11.99□□□□□ -0.49
HMGN1P6-201ENST00000438508 PCDHGA10Q9Y5H3 936 aa11.97□□□□□ -0.49
HMGN1P6-201ENST00000438508 FBXW7Q969H0 707 aa11.96□□□□□ -0.49
HMGN1P6-201ENST00000438508 ATAD2BQ9ULI0 1458 aa11.95□□□□□ -0.5
HMGN1P6-201ENST00000438508 SMARCA2P51531 1590 aa11.94□□□□□ -0.5
HMGN1P6-201ENST00000438508 FAM98CQ17RN3 349 aaKnown RBP11.94□□□□□ -0.5
HMGN1P6-201ENST00000438508 PKD2Q13563 968 aa11.93□□□□□ -0.5
HMGN1P6-201ENST00000438508 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.93□□□□□ -0.5
HMGN1P6-201ENST00000438508 TJAP1Q5JTD0 557 aa11.92□□□□□ -0.5
HMGN1P6-201ENST00000438508 HPS5Q9UPZ3 1129 aa11.92□□□□□ -0.5
HMGN1P6-201ENST00000438508 CCDC88BA6NC98 1476 aa11.9□□□□□ -0.5
HMGN1P6-201ENST00000438508 TYW1BQ6NUM6 668 aa11.9□□□□□ -0.5
HMGN1P6-201ENST00000438508 LRCH3Q96II8 777 aa11.9□□□□□ -0.5
HMGN1P6-201ENST00000438508 EIF4G1Q04637 1599 aaKnown RBP11.89□□□□□ -0.51
HMGN1P6-201ENST00000438508 HS6ST3Q8IZP7 471 aa11.89□□□□□ -0.51
HMGN1P6-201ENST00000438508 PDZRN3Q9UPQ7 1066 aa11.89□□□□□ -0.51
HMGN1P6-201ENST00000438508 PHF14O94880 888 aa11.88□□□□□ -0.51
HMGN1P6-201ENST00000438508 PDE4AP27815 886 aa11.88□□□□□ -0.51
HMGN1P6-201ENST00000438508 SEPT9Q9UHD8 586 aaPredicted RBP11.88□□□□□ -0.51
HMGN1P6-201ENST00000438508 NCAPD3P42695 1498 aa11.88□□□□□ -0.51
HMGN1P6-201ENST00000438508 NCKAP5LQ9HCH0 1330 aa11.87□□□□□ -0.51
HMGN1P6-201ENST00000438508 PPP1R18Q6NYC8 613 aa11.87□□□□□ -0.51
HMGN1P6-201ENST00000438508 TRIM6-TRIM34B2RNG4 842 aa11.86□□□□□ -0.51
HMGN1P6-201ENST00000438508 MAP3K9P80192 1104 aa11.86□□□□□ -0.51
HMGN1P6-201ENST00000438508 BAZ1BQ9UIG0 1483 aaKnown RBP11.84□□□□□ -0.51
HMGN1P6-201ENST00000438508 HMGXB3Q12766 1538 aa11.82□□□□□ -0.52
HMGN1P6-201ENST00000438508 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.82□□□□□ -0.52
HMGN1P6-201ENST00000438508 C6orf132Q5T0Z8 1188 aa11.81□□□□□ -0.52
HMGN1P6-201ENST00000438508 DNAJC5Q9H3Z4 198 aa11.81□□□□□ -0.52
HMGN1P6-201ENST00000438508 IL21Q9HBE4 155 aa11.81□□□□□ -0.52
HMGN1P6-201ENST00000438508 RYDENQ9NUL5 291 aaKnown RBP11.81□□□□□ -0.52
HMGN1P6-201ENST00000438508 PPP4CP60510 307 aa11.8□□□□□ -0.52
HMGN1P6-201ENST00000438508 LCE2AQ5TA79 106 aaPredicted RBP11.78□□□□□ -0.52
HMGN1P6-201ENST00000438508 MTRQ99707 1265 aa11.77□□□□□ -0.53
HMGN1P6-201ENST00000438508 EPAS1Q99814 870 aa11.77□□□□□ -0.53
HMGN1P6-201ENST00000438508 MFSD10Q14728 455 aa11.76□□□□□ -0.53
HMGN1P6-201ENST00000438508 DDX27Q96GQ7 796 aaKnown RBP11.75□□□□□ -0.53
HMGN1P6-201ENST00000438508 EMILIN3Q9NT22 766 aa11.75□□□□□ -0.53
HMGN1P6-201ENST00000438508 TREML4Q6UXN2 200 aa11.72□□□□□ -0.53
HMGN1P6-201ENST00000438508 LARP6Q9BRS8 491 aaKnown RBP11.71□□□□□ -0.53
HMGN1P6-201ENST00000438508 NKX1-1Q15270 411 aaPredicted RBP11.7□□□□□ -0.54
HMGN1P6-201ENST00000438508 PACS2Q86VP3 889 aa11.7□□□□□ -0.54
HMGN1P6-201ENST00000438508 TMUB1Q9BVT8 246 aa11.7□□□□□ -0.54
HMGN1P6-201ENST00000438508 CC2D2AQ9P2K1 1620 aa11.7□□□□□ -0.54
HMGN1P6-201ENST00000438508 DGAT1O75907 488 aa11.69□□□□□ -0.54
HMGN1P6-201ENST00000438508 MYT1Q01538 1121 aa11.69□□□□□ -0.54
HMGN1P6-201ENST00000438508 TRIM67Q6ZTA4 783 aa11.69□□□□□ -0.54
HMGN1P6-201ENST00000438508 ZNF516Q92618 1163 aa11.68□□□□□ -0.54
HMGN1P6-201ENST00000438508 GGCXP38435 758 aa11.67□□□□□ -0.54
HMGN1P6-201ENST00000438508 POTECB2RU33 542 aa11.66□□□□□ -0.54
HMGN1P6-201ENST00000438508 TSKSQ9UJT2 592 aa11.65□□□□□ -0.54
HMGN1P6-201ENST00000438508 SAMD7Q7Z3H4 446 aa11.64□□□□□ -0.55
HMGN1P6-201ENST00000438508 PKDCCQ504Y2 493 aa11.63□□□□□ -0.55
HMGN1P6-201ENST00000438508 PRR20EP86478 221 aa11.62□□□□□ -0.55
HMGN1P6-201ENST00000438508 PRR20CP86479 221 aa11.62□□□□□ -0.55
HMGN1P6-201ENST00000438508 PRR20DP86480 221 aa11.62□□□□□ -0.55
HMGN1P6-201ENST00000438508 PRR20BP86481 221 aa11.62□□□□□ -0.55
HMGN1P6-201ENST00000438508 PRR20AP86496 221 aa11.62□□□□□ -0.55
HMGN1P6-201ENST00000438508 ABCC8Q09428 1581 aa11.6□□□□□ -0.55
HMGN1P6-201ENST00000438508 CFTRP13569 1480 aa11.6□□□□□ -0.55
HMGN1P6-201ENST00000438508 NKX2-3Q8TAU0 364 aa11.6□□□□□ -0.55
HMGN1P6-201ENST00000438508 CHGAP10645 457 aaKnown RBP11.58□□□□□ -0.56
HMGN1P6-201ENST00000438508 STK17AQ9UEE5 414 aa11.58□□□□□ -0.56
HMGN1P6-201ENST00000438508 WRNQ14191 1432 aaPredicted RBP eCLIP11.58□□□□□ -0.56
HMGN1P6-201ENST00000438508 LOC105371045A0A1W2PR82 267 aa11.56□□□□□ -0.56
HMGN1P6-201ENST00000438508 APLP1P51693 650 aa11.56□□□□□ -0.56
HMGN1P6-201ENST00000438508 PRDM2Q13029 1718 aa11.56□□□□□ -0.56
HMGN1P6-201ENST00000438508 CADPSQ9ULU8 1353 aa11.55□□□□□ -0.56
HMGN1P6-201ENST00000438508 SLC19A1P41440 591 aa11.55□□□□□ -0.56
HMGN1P6-201ENST00000438508 RBM33Q96EV2 1170 aaKnown RBP11.55□□□□□ -0.56
HMGN1P6-201ENST00000438508 LOC100996750A0A140TA64 210 aa11.53□□□□□ -0.56
HMGN1P6-201ENST00000438508 CAMK2BQ13554 666 aa11.53□□□□□ -0.56
HMGN1P6-201ENST00000438508 NECTIN2Q92692 538 aa11.53□□□□□ -0.56
HMGN1P6-201ENST00000438508 EMID1Q96A84 441 aaPredicted RBP11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms