RNA–Protein interactions for RNA: ENST00000430888.1

LINC01553-201, Transcript of long intergenic non-protein coding RNA 1553, humanhuman

Gene LINC01553, Length 387 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01553-201ENST00000430888 DSG2Q14126 1118 aa9.06□□□□□ -0.96
LINC01553-201ENST00000430888 RYDENQ9NUL5 291 aaKnown RBP9.06□□□□□ -0.96
LINC01553-201ENST00000430888 SOWAHBA6NEL2 793 aa9.04□□□□□ -0.96
LINC01553-201ENST00000430888 PRKD2Q9BZL6 878 aa9.04□□□□□ -0.96
LINC01553-201ENST00000430888 WBP1LQ9NX94 342 aa9.04□□□□□ -0.96
LINC01553-201ENST00000430888 OXER1Q8TDS5 423 aa9.03□□□□□ -0.96
LINC01553-201ENST00000430888 NYAP1Q6ZVC0 841 aa9.02□□□□□ -0.97
LINC01553-201ENST00000430888 ADAM33Q9BZ11 813 aa9.02□□□□□ -0.97
LINC01553-201ENST00000430888 GPHNQ9NQX3 736 aaPredicted RBP9.02□□□□□ -0.97
LINC01553-201ENST00000430888 NCKAP5LQ9HCH0 1330 aa9.01□□□□□ -0.97
LINC01553-201ENST00000430888 VSIG10Q8N0Z9 540 aa8.99□□□□□ -0.97
LINC01553-201ENST00000430888 RABGEF1Q9UJ41 708 aa8.99□□□□□ -0.97
LINC01553-201ENST00000430888 LOC100996750A0A140TA64 210 aa8.98□□□□□ -0.97
LINC01553-201ENST00000430888 PROX2Q3B8N5 592 aa8.98□□□□□ -0.97
LINC01553-201ENST00000430888 UPF1Q92900 1129 aaKnown RBP eCLIP8.98□□□□□ -0.97
LINC01553-201ENST00000430888 KRTAP4-6Q9BYQ5 205 aa8.98□□□□□ -0.97
LINC01553-201ENST00000430888 LCE2AQ5TA79 106 aaPredicted RBP8.96□□□□□ -0.98
LINC01553-201ENST00000430888 CRISPLD2Q9H0B8 497 aa8.96□□□□□ -0.98
LINC01553-201ENST00000430888 ZDHHC16Q969W1 377 aa8.95□□□□□ -0.98
LINC01553-201ENST00000430888 JPH4Q96JJ6 628 aa8.95□□□□□ -0.98
LINC01553-201ENST00000430888 ZFRQ96KR1 1074 aaKnown RBP8.95□□□□□ -0.98
LINC01553-201ENST00000430888 PDZRN3Q9UPQ7 1066 aa8.94□□□□□ -0.98
LINC01553-201ENST00000430888 V9GY48 417 aaPredicted RBP8.94□□□□□ -0.98
LINC01553-201ENST00000430888 POTECB2RU33 542 aa8.93□□□□□ -0.98
LINC01553-201ENST00000430888 LAPTM4BQ86VI4 370 aa8.93□□□□□ -0.98
LINC01553-201ENST00000430888 ANO8Q9HCE9 1232 aaPredicted RBP8.92□□□□□ -0.98
LINC01553-201ENST00000430888 PPP1R3GB7ZBB8 358 aa8.91□□□□□ -0.98
LINC01553-201ENST00000430888 COL9A1P20849 921 aa8.91□□□□□ -0.98
LINC01553-201ENST00000430888 LARP6Q9BRS8 491 aaKnown RBP8.9□□□□□ -0.98
LINC01553-201ENST00000430888 MFSD10Q14728 455 aa8.89□□□□□ -0.99
LINC01553-201ENST00000430888 PDE4AP27815 886 aa8.88□□□□□ -0.99
LINC01553-201ENST00000430888 PPP1R18Q6NYC8 613 aa8.88□□□□□ -0.99
LINC01553-201ENST00000430888 TREML4Q6UXN2 200 aa8.88□□□□□ -0.99
LINC01553-201ENST00000430888 KIAA1468Q9P260 1216 aa8.87□□□□□ -0.99
LINC01553-201ENST00000430888 TSR3Q9UJK0 312 aaKnown RBP8.87□□□□□ -0.99
LINC01553-201ENST00000430888 TJAP1Q5JTD0 557 aa8.86□□□□□ -0.99
LINC01553-201ENST00000430888 SEPT9Q9UHD8 586 aaPredicted RBP8.86□□□□□ -0.99
LINC01553-201ENST00000430888 HPS5Q9UPZ3 1129 aa8.86□□□□□ -0.99
LINC01553-201ENST00000430888 EVI5O60447 810 aa8.83□□□□□ -1
LINC01553-201ENST00000430888 MYT1Q01538 1121 aa8.82□□□□□ -1
LINC01553-201ENST00000430888 PPP1R15BQ5SWA1 713 aa8.82□□□□□ -1
LINC01553-201ENST00000430888 DDX27Q96GQ7 796 aaKnown RBP8.82□□□□□ -1
LINC01553-201ENST00000430888 KCNV2Q8TDN2 545 aa8.81□□□□□ -1
LINC01553-201ENST00000430888 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.81□□□□□ -1
LINC01553-201ENST00000430888 CAMK2BQ13554 666 aa8.8□□□□□ -1
LINC01553-201ENST00000430888 TRIM67Q6ZTA4 783 aa8.8□□□□□ -1
LINC01553-201ENST00000430888 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.8□□□□□ -1
LINC01553-201ENST00000430888 EMILIN3Q9NT22 766 aa8.8□□□□□ -1
LINC01553-201ENST00000430888 PCDHGA10Q9Y5H3 936 aa8.79□□□□□ -1
LINC01553-201ENST00000430888 E2F4Q16254 413 aa8.78□□□□□ -1
LINC01553-201ENST00000430888 LRCH3Q96II8 777 aa8.78□□□□□ -1
LINC01553-201ENST00000430888 WDR70Q9NW82 654 aa8.78□□□□□ -1
LINC01553-201ENST00000430888 FAM98CQ17RN3 349 aaKnown RBP8.77□□□□□ -1.01
LINC01553-201ENST00000430888 ONECUT3O60422 494 aaPredicted RBP8.76□□□□□ -1.01
LINC01553-201ENST00000430888 MTRQ99707 1265 aa8.76□□□□□ -1.01
LINC01553-201ENST00000430888 STK17AQ9UEE5 414 aa8.76□□□□□ -1.01
LINC01553-201ENST00000430888 ZNF516Q92618 1163 aa8.75□□□□□ -1.01
LINC01553-201ENST00000430888 IL21Q9HBE4 155 aa8.73□□□□□ -1.01
LINC01553-201ENST00000430888 PKDCCQ504Y2 493 aa8.72□□□□□ -1.01
LINC01553-201ENST00000430888 DGAT1O75907 488 aa8.71□□□□□ -1.02
LINC01553-201ENST00000430888 PPP4CP60510 307 aa8.71□□□□□ -1.02
LINC01553-201ENST00000430888 NKX2-3Q8TAU0 364 aa8.71□□□□□ -1.02
LINC01553-201ENST00000430888 ARIH1Q9Y4X5 557 aaPredicted RBP8.71□□□□□ -1.02
LINC01553-201ENST00000430888 TRIM6-TRIM34B2RNG4 842 aa8.7□□□□□ -1.02
LINC01553-201ENST00000430888 DPYSL4O14531 572 aa8.69□□□□□ -1.02
LINC01553-201ENST00000430888 ARHGEF1Q92888 912 aaKnown RBP8.68□□□□□ -1.02
LINC01553-201ENST00000430888 TYW1BQ6NUM6 668 aa8.67□□□□□ -1.02
LINC01553-201ENST00000430888 EMID1Q96A84 441 aaPredicted RBP8.67□□□□□ -1.02
LINC01553-201ENST00000430888 WFS1O76024 890 aa8.66□□□□□ -1.02
LINC01553-201ENST00000430888 FBXW7Q969H0 707 aa8.66□□□□□ -1.02
LINC01553-201ENST00000430888 SEMA3EO15041 775 aa8.65□□□□□ -1.02
LINC01553-201ENST00000430888 ST8SIA5O15466 376 aa8.65□□□□□ -1.02
LINC01553-201ENST00000430888 WIPF1O43516 503 aa8.65□□□□□ -1.02
LINC01553-201ENST00000430888 PHF14O94880 888 aa8.64□□□□□ -1.03
LINC01553-201ENST00000430888 C6orf132Q5T0Z8 1188 aa8.64□□□□□ -1.03
LINC01553-201ENST00000430888 P3H3Q8IVL6 736 aa8.64□□□□□ -1.03
LINC01553-201ENST00000430888 MLLT3P42568 568 aaPredicted RBP8.62□□□□□ -1.03
LINC01553-201ENST00000430888 MAP3K9P80192 1104 aa8.62□□□□□ -1.03
LINC01553-201ENST00000430888 NFX1Q12986 1120 aaKnown RBP8.62□□□□□ -1.03
LINC01553-201ENST00000430888 BCANQ96GW7 911 aa8.62□□□□□ -1.03
LINC01553-201ENST00000430888 AAASQ9NRG9 546 aa8.62□□□□□ -1.03
LINC01553-201ENST00000430888 PRR20EP86478 221 aa8.61□□□□□ -1.03
LINC01553-201ENST00000430888 PRR20CP86479 221 aa8.61□□□□□ -1.03
LINC01553-201ENST00000430888 PRR20DP86480 221 aa8.61□□□□□ -1.03
LINC01553-201ENST00000430888 PRR20BP86481 221 aa8.61□□□□□ -1.03
LINC01553-201ENST00000430888 PRR20AP86496 221 aa8.61□□□□□ -1.03
LINC01553-201ENST00000430888 PDIA6Q15084 440 aa8.61□□□□□ -1.03
LINC01553-201ENST00000430888 SAMD7Q7Z3H4 446 aa8.61□□□□□ -1.03
LINC01553-201ENST00000430888 FAM187AA6NFU0 413 aa8.6□□□□□ -1.03
LINC01553-201ENST00000430888 INSM1Q01101 510 aaPredicted RBP8.6□□□□□ -1.03
LINC01553-201ENST00000430888 LCE2CQ5TA81 110 aa8.6□□□□□ -1.03
LINC01553-201ENST00000430888 TMUB1Q9BVT8 246 aa8.59□□□□□ -1.03
LINC01553-201ENST00000430888 TSKSQ9UJT2 592 aa8.59□□□□□ -1.03
LINC01553-201ENST00000430888 TESPA1A2RU30 521 aaPredicted RBP8.58□□□□□ -1.04
LINC01553-201ENST00000430888 GGCXP38435 758 aa8.58□□□□□ -1.04
LINC01553-201ENST00000430888 SLC19A1P41440 591 aa8.58□□□□□ -1.04
LINC01553-201ENST00000430888 PRIM1P49642 420 aaKnown RBP8.58□□□□□ -1.04
LINC01553-201ENST00000430888 APLP1P51693 650 aa8.58□□□□□ -1.04
LINC01553-201ENST00000430888 SPRYD7Q5W111 196 aa8.57□□□□□ -1.04
LINC01553-201ENST00000430888 DACH1Q9UI36 760 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms