RNA–Protein interactions for RNA: ENST00000430888.1

LINC01553-201, Transcript of long intergenic non-protein coding RNA 1553, humanhuman

Gene LINC01553, Length 387 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01553-201ENST00000430888 AEBP2Q6ZN18 517 aaPredicted RBP24.23■■□□□ 1.47
LINC01553-201ENST00000430888 CHIC1Q5VXU3 224 aa22.46■■□□□ 1.19
LINC01553-201ENST00000430888 SENP3Q9H4L4 574 aaPredicted RBP20.66■□□□□ 0.9
LINC01553-201ENST00000430888 PHF23Q9BUL5 403 aaPredicted RBP20.33■□□□□ 0.85
LINC01553-201ENST00000430888 POTEDQ86YR6 584 aa19.55■□□□□ 0.72
LINC01553-201ENST00000430888 FOXD1Q16676 465 aa19.45■□□□□ 0.7
LINC01553-201ENST00000430888 MSH5O43196 834 aa18.43■□□□□ 0.54
LINC01553-201ENST00000430888 PIAS4Q8N2W9 510 aaPredicted RBP17.91■□□□□ 0.46
LINC01553-201ENST00000430888 PPP6R1Q9UPN7 881 aa17.58■□□□□ 0.4
LINC01553-201ENST00000430888 ADRA2BP18089 450 aa17.43■□□□□ 0.38
LINC01553-201ENST00000430888 PLPPR3Q6T4P5 718 aa17.2■□□□□ 0.34
LINC01553-201ENST00000430888 CACNB1Q02641 598 aaPredicted RBP16.36■□□□□ 0.21
LINC01553-201ENST00000430888 MAPK8IP2Q13387 824 aaPredicted RBP16.3■□□□□ 0.2
LINC01553-201ENST00000430888 DMRT2Q9Y5R5 561 aa16.29■□□□□ 0.2
LINC01553-201ENST00000430888 SCAF1Q9H7N4 1312 aaKnown RBP15.79■□□□□ 0.12
LINC01553-201ENST00000430888 RNF39Q9H2S5 420 aa15.71■□□□□ 0.11
LINC01553-201ENST00000430888 DCAF8L1A6NGE4 600 aa15.62■□□□□ 0.09
LINC01553-201ENST00000430888 C1QBPQ07021 282 aaKnown RBP15.37■□□□□ 0.05
LINC01553-201ENST00000430888 HOXD11P31277 338 aaPredicted RBP15.36■□□□□ 0.05
LINC01553-201ENST00000430888 POTEHQ6S545 545 aa15.12■□□□□ 0.01
LINC01553-201ENST00000430888 PPP4R3CPQ6ZMV5 832 aa15.01□□□□□ -0.01
LINC01553-201ENST00000430888 RNF216Q9NWF9 866 aaPredicted RBP14.98□□□□□ -0.01
LINC01553-201ENST00000430888 DNAJC5BQ9UF47 199 aa14.94□□□□□ -0.02
LINC01553-201ENST00000430888 CNKSR2Q8WXI2 1034 aa14.89□□□□□ -0.03
LINC01553-201ENST00000430888 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.58□□□□□ -0.08
LINC01553-201ENST00000430888 DSG3P32926 999 aa14.43□□□□□ -0.1
LINC01553-201ENST00000430888 SPINK5Q9NQ38 1064 aaPredicted RBP14.32□□□□□ -0.12
LINC01553-201ENST00000430888 U3KPZ7 1027 aaPredicted RBP14.26□□□□□ -0.13
LINC01553-201ENST00000430888 CAPN15O75808 1086 aa14.25□□□□□ -0.13
LINC01553-201ENST00000430888 NCBP3Q53F19 620 aaKnown RBP14.07□□□□□ -0.16
LINC01553-201ENST00000430888 NPM3O75607 178 aaKnown RBP13.99□□□□□ -0.17
LINC01553-201ENST00000430888 ABCB7O75027 752 aa13.91□□□□□ -0.18
LINC01553-201ENST00000430888 TRHP20396 242 aaPredicted RBP13.84□□□□□ -0.19
LINC01553-201ENST00000430888 CHRDL2Q6WN34 429 aa13.8□□□□□ -0.2
LINC01553-201ENST00000430888 SP7Q8TDD2 431 aaPredicted RBP13.76□□□□□ -0.21
LINC01553-201ENST00000430888 ZNF219Q9P2Y4 722 aaPredicted RBP13.72□□□□□ -0.21
LINC01553-201ENST00000430888 RBM42Q9BTD8 480 aaKnown RBP13.68□□□□□ -0.22
LINC01553-201ENST00000430888 SLC4A2P04920 1241 aa13.63□□□□□ -0.23
LINC01553-201ENST00000430888 APLP2Q06481 763 aa13.58□□□□□ -0.24
LINC01553-201ENST00000430888 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.4□□□□□ -0.26
LINC01553-201ENST00000430888 HNRNPUL2Q1KMD3 747 aaKnown RBP13.4□□□□□ -0.26
LINC01553-201ENST00000430888 SAMD1Q6SPF0 538 aaPredicted RBP13.32□□□□□ -0.28
LINC01553-201ENST00000430888 PIP4P2Q8N4L2 257 aa13.32□□□□□ -0.28
LINC01553-201ENST00000430888 POLA2Q14181 598 aa13.28□□□□□ -0.28
LINC01553-201ENST00000430888 HAX1O00165 279 aa13.25□□□□□ -0.29
LINC01553-201ENST00000430888 AKT1S1Q96B36 256 aa13.23□□□□□ -0.29
LINC01553-201ENST00000430888 EVX2Q03828 476 aa13.16□□□□□ -0.3
LINC01553-201ENST00000430888 KCNA4P22459 653 aa13.15□□□□□ -0.3
LINC01553-201ENST00000430888 REM2Q8IYK8 340 aaPredicted RBP13.15□□□□□ -0.3
LINC01553-201ENST00000430888 FXR2P51116 673 aaKnown RBP eCLIP13.09□□□□□ -0.31
LINC01553-201ENST00000430888 PITPNM1O00562 1244 aa13.04□□□□□ -0.32
LINC01553-201ENST00000430888 OSCARQ8IYS5 282 aa12.91□□□□□ -0.34
LINC01553-201ENST00000430888 MYCNP04198 464 aaPredicted RBP12.89□□□□□ -0.35
LINC01553-201ENST00000430888 LHX8Q68G74 356 aa12.89□□□□□ -0.35
LINC01553-201ENST00000430888 ZBTB12Q9Y330 459 aaPredicted RBP12.84□□□□□ -0.35
LINC01553-201ENST00000430888 ATF5Q9Y2D1 282 aaPredicted RBP12.79□□□□□ -0.36
LINC01553-201ENST00000430888 PLSCR2Q9NRY7 297 aa12.78□□□□□ -0.36
LINC01553-201ENST00000430888 GABBR2O75899 941 aa12.73□□□□□ -0.37
LINC01553-201ENST00000430888 C19orf67A6NJJ6 358 aa12.71□□□□□ -0.37
LINC01553-201ENST00000430888 PRKAR2AP13861 404 aaKnown RBP12.66□□□□□ -0.38
LINC01553-201ENST00000430888 POTEIP0CG38 1075 aa12.53□□□□□ -0.4
LINC01553-201ENST00000430888 CLEC11AQ9Y240 323 aa12.46□□□□□ -0.41
LINC01553-201ENST00000430888 SLC4A1APQ9BWU0 796 aaKnown RBP12.44□□□□□ -0.42
LINC01553-201ENST00000430888 SPDYE2BA6NHP3 402 aa12.43□□□□□ -0.42
LINC01553-201ENST00000430888 SPDYE6P0CI01 402 aa12.43□□□□□ -0.42
LINC01553-201ENST00000430888 SPDYE2Q495Y8 402 aa12.43□□□□□ -0.42
LINC01553-201ENST00000430888 SPDYE1Q8NFV5 336 aaPredicted RBP12.41□□□□□ -0.42
LINC01553-201ENST00000430888 CHADLQ6NUI6 762 aa12.38□□□□□ -0.43
LINC01553-201ENST00000430888 FOXD4L1Q9NU39 408 aa12.32□□□□□ -0.44
LINC01553-201ENST00000430888 SSUH2Q9Y2M2 353 aa12.23□□□□□ -0.45
LINC01553-201ENST00000430888 EHMT2Q96KQ7 1210 aa12.21□□□□□ -0.45
LINC01553-201ENST00000430888 CD44P16070 742 aaKnown RBP12.2□□□□□ -0.46
LINC01553-201ENST00000430888 POTEMA6NI47 508 aa12.19□□□□□ -0.46
LINC01553-201ENST00000430888 ZBTB22O15209 634 aa12.19□□□□□ -0.46
LINC01553-201ENST00000430888 OTUD5Q96G74 571 aa12.19□□□□□ -0.46
LINC01553-201ENST00000430888 FBLN2P98095 1184 aa12.18□□□□□ -0.46
LINC01553-201ENST00000430888 ZNF692Q9BU19 519 aaPredicted RBP12.15□□□□□ -0.46
LINC01553-201ENST00000430888 MKRN4PQ13434 485 aaPredicted RBP12.14□□□□□ -0.47
LINC01553-201ENST00000430888 POTEGQ6S5H5 508 aa12.13□□□□□ -0.47
LINC01553-201ENST00000430888 CSRNP3Q8WYN3 585 aa12.13□□□□□ -0.47
LINC01553-201ENST00000430888 DCBLD2Q96PD2 775 aa12.13□□□□□ -0.47
LINC01553-201ENST00000430888 PRR29P0C7W0 189 aa12.11□□□□□ -0.47
LINC01553-201ENST00000430888 POTEB2H3BUK9 544 aa12.1□□□□□ -0.47
LINC01553-201ENST00000430888 CLCN6P51797 869 aa12.1□□□□□ -0.47
LINC01553-201ENST00000430888 FARP1Q9Y4F1 1045 aaPredicted RBP12.07□□□□□ -0.48
LINC01553-201ENST00000430888 ATXN8OSP0DMR3 200 aa11.98□□□□□ -0.49
LINC01553-201ENST00000430888 ZNF579Q8NAF0 562 aaKnown RBP11.98□□□□□ -0.49
LINC01553-201ENST00000430888 PABPN1Q86U42 306 aaKnown RBP eCLIP11.97□□□□□ -0.49
LINC01553-201ENST00000430888 PCDH10Q9P2E7 1040 aa11.95□□□□□ -0.5
LINC01553-201ENST00000430888 GALR2O43603 387 aaPredicted RBP11.94□□□□□ -0.5
LINC01553-201ENST00000430888 ZRANB1Q9UGI0 708 aa11.9□□□□□ -0.5
LINC01553-201ENST00000430888 LCE2DQ5TA82 110 aaPredicted RBP11.86□□□□□ -0.51
LINC01553-201ENST00000430888 PELP1Q8IZL8 1130 aaKnown RBP11.83□□□□□ -0.52
LINC01553-201ENST00000430888 POTEJP0CG39 1038 aa11.79□□□□□ -0.52
LINC01553-201ENST00000430888 PHF12Q96QT6 1004 aa11.71□□□□□ -0.53
LINC01553-201ENST00000430888 CREBZFQ9NS37 354 aa11.69□□□□□ -0.54
LINC01553-201ENST00000430888 FAM163AQ96GL9 167 aaPredicted RBP11.68□□□□□ -0.54
LINC01553-201ENST00000430888 METRNQ9UJH8 293 aa11.66□□□□□ -0.54
LINC01553-201ENST00000430888 ASTLQ6HA08 431 aaPredicted RBP11.6□□□□□ -0.55
LINC01553-201ENST00000430888 MAMSTRQ6ZN01 415 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms