RNA–Protein interactions for RNA: ENST00000429650.1

SNRNP200-202, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 2,637 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-202ENST00000429650 DCAF11Q8TEB1 546 aa18.1■□□□□ 0.49
SNRNP200-202ENST00000429650 ST20-MTHFSA0A0A6YYL1 179 aa18.09■□□□□ 0.49
SNRNP200-202ENST00000429650 RSPH4AQ5TD94 716 aa18.09■□□□□ 0.49
SNRNP200-202ENST00000429650 E9PCH4 1651 aa18.07■□□□□ 0.48
SNRNP200-202ENST00000429650 SYCP2Q9BX26 1530 aa18.07■□□□□ 0.48
SNRNP200-202ENST00000429650 PNISRQ8TF01 805 aaKnown RBP18.07■□□□□ 0.48
SNRNP200-202ENST00000429650 MAST1Q9Y2H9 1570 aa18.07■□□□□ 0.48
SNRNP200-202ENST00000429650 TTC37Q6PGP7 1564 aa18.06■□□□□ 0.48
SNRNP200-202ENST00000429650 SENP3-EIF4A1A0A087X0R7 540 aa18.06■□□□□ 0.48
SNRNP200-202ENST00000429650 B4GALNT3Q6L9W6 998 aa18.06■□□□□ 0.48
SNRNP200-202ENST00000429650 UNC13BO14795 1591 aa18.06■□□□□ 0.48
SNRNP200-202ENST00000429650 CHD1O14646 1710 aa18.05■□□□□ 0.48
SNRNP200-202ENST00000429650 NUDCQ9Y266 331 aa18.05■□□□□ 0.48
SNRNP200-202ENST00000429650 FANCIQ9NVI1 1328 aa18.05■□□□□ 0.48
SNRNP200-202ENST00000429650 TRPM1Q7Z4N2 1603 aa18.05■□□□□ 0.48
SNRNP200-202ENST00000429650 CCDC144AA2RUR9 1427 aa18.04■□□□□ 0.48
SNRNP200-202ENST00000429650 TMC1Q8TDI8 760 aa18.04■□□□□ 0.48
SNRNP200-202ENST00000429650 PRAG1Q86YV5 1406 aa18.04■□□□□ 0.48
SNRNP200-202ENST00000429650 ARHGAP5Q13017 1502 aa18.03■□□□□ 0.48
SNRNP200-202ENST00000429650 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.03■□□□□ 0.48
SNRNP200-202ENST00000429650 SHROOM2Q13796 1616 aa18.03■□□□□ 0.48
SNRNP200-202ENST00000429650 MSH5O43196 834 aa18.02■□□□□ 0.48
SNRNP200-202ENST00000429650 KTN1Q86UP2 1357 aaKnown RBP18.02■□□□□ 0.48
SNRNP200-202ENST00000429650 RNF123Q5XPI4 1314 aa18.02■□□□□ 0.47
SNRNP200-202ENST00000429650 PLA2R1Q13018 1463 aa18.01■□□□□ 0.47
SNRNP200-202ENST00000429650 BRD4O60885 1362 aaPredicted RBP18.01■□□□□ 0.47
SNRNP200-202ENST00000429650 LRPPRCP42704 1394 aaKnown RBP18.01■□□□□ 0.47
SNRNP200-202ENST00000429650 MYBBP1AQ9BQG0 1328 aaKnown RBP18■□□□□ 0.47
SNRNP200-202ENST00000429650 PLXNC1O60486 1568 aa18■□□□□ 0.47
SNRNP200-202ENST00000429650 RALBP1Q15311 655 aa18■□□□□ 0.47
SNRNP200-202ENST00000429650 MYO5CQ9NQX4 1742 aa17.99■□□□□ 0.47
SNRNP200-202ENST00000429650 IQGAP3Q86VI3 1631 aa17.99■□□□□ 0.47
SNRNP200-202ENST00000429650 A2MP01023 1474 aa17.98■□□□□ 0.47
SNRNP200-202ENST00000429650 GPRASP1Q5JY77 1395 aa17.97■□□□□ 0.47
SNRNP200-202ENST00000429650 PLEKHH2Q8IVE3 1493 aa17.97■□□□□ 0.47
SNRNP200-202ENST00000429650 ABCC2Q92887 1545 aa17.97■□□□□ 0.47
SNRNP200-202ENST00000429650 LAMC1P11047 1609 aa17.96■□□□□ 0.47
SNRNP200-202ENST00000429650 RGL3Q3MIN7 710 aa17.96■□□□□ 0.47
SNRNP200-202ENST00000429650 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.96■□□□□ 0.471e-6■□□□□ 10.5
SNRNP200-202ENST00000429650 NBPF1Q3BBV0 1214 aa17.95■□□□□ 0.46
SNRNP200-202ENST00000429650 ERCC6L2Q5T890 1561 aa17.95■□□□□ 0.46
SNRNP200-202ENST00000429650 NCBP3Q53F19 620 aaKnown RBP17.94■□□□□ 0.46
SNRNP200-202ENST00000429650 PRDM15P57071 1507 aaPredicted RBP17.94■□□□□ 0.46
SNRNP200-202ENST00000429650 DUOX2Q9NRD8 1548 aa17.94■□□□□ 0.46
SNRNP200-202ENST00000429650 PARD3Q8TEW0 1356 aa17.93■□□□□ 0.46
SNRNP200-202ENST00000429650 MAGI2Q86UL8 1455 aa17.93■□□□□ 0.46
SNRNP200-202ENST00000429650 COL17A1Q9UMD9 1497 aaPredicted RBP17.92■□□□□ 0.46
SNRNP200-202ENST00000429650 ATP10AO60312 1499 aa17.92■□□□□ 0.46
SNRNP200-202ENST00000429650 EIF2AK4Q9P2K8 1649 aaKnown RBP17.91■□□□□ 0.46
SNRNP200-202ENST00000429650 ERBINQ96RT1 1412 aa17.91■□□□□ 0.46
SNRNP200-202ENST00000429650 NLRP13Q86W25 1043 aa17.9■□□□□ 0.46
SNRNP200-202ENST00000429650 PER1O15534 1290 aaPredicted RBP17.9■□□□□ 0.46
SNRNP200-202ENST00000429650 TESK2Q96S53 571 aa17.88■□□□□ 0.45
SNRNP200-202ENST00000429650 DISP3Q9P2K9 1392 aa17.88■□□□□ 0.45
SNRNP200-202ENST00000429650 PLCH2O75038 1416 aa17.88■□□□□ 0.45
SNRNP200-202ENST00000429650 CCDC136Q96JN2 1154 aa17.87■□□□□ 0.45
SNRNP200-202ENST00000429650 ZCCHC11Q5TAX3 1644 aaKnown RBP17.86■□□□□ 0.45
SNRNP200-202ENST00000429650 ABCC1P33527 1531 aa17.85■□□□□ 0.45
SNRNP200-202ENST00000429650 RNF17Q9BXT8 1623 aaKnown RBP17.85■□□□□ 0.45
SNRNP200-202ENST00000429650 WASHC2CQ9Y4E1 1318 aa17.84■□□□□ 0.45
SNRNP200-202ENST00000429650 PLEKHG5O94827 1062 aa17.84■□□□□ 0.45
SNRNP200-202ENST00000429650 EFCAB2Q5VUJ9 269 aa17.83■□□□□ 0.44
SNRNP200-202ENST00000429650 TRAPPC8Q9Y2L5 1435 aa17.82■□□□□ 0.44
SNRNP200-202ENST00000429650 UHRF1BP1LA0JNW5 1464 aa17.81■□□□□ 0.44
SNRNP200-202ENST00000429650 TMF1P82094 1093 aa17.81■□□□□ 0.44
SNRNP200-202ENST00000429650 RRP1P56182 461 aaKnown RBP17.8■□□□□ 0.44
SNRNP200-202ENST00000429650 PANK3Q9H999 370 aa17.8■□□□□ 0.44
SNRNP200-202ENST00000429650 PDE3BQ13370 1112 aa17.8■□□□□ 0.44
SNRNP200-202ENST00000429650 CC2D1BQ5T0F9 858 aaKnown RBP17.8■□□□□ 0.44
SNRNP200-202ENST00000429650 RCAN3Q9UKA8 241 aa17.78■□□□□ 0.44
SNRNP200-202ENST00000429650 SALL2Q9Y467 1007 aaPredicted RBP17.78■□□□□ 0.44
SNRNP200-202ENST00000429650 INSRP06213 1382 aa17.78■□□□□ 0.44
SNRNP200-202ENST00000429650 ZMYM4Q5VZL5 1548 aa17.78■□□□□ 0.44
SNRNP200-202ENST00000429650 CLASP1Q7Z460 1538 aa17.77■□□□□ 0.44
SNRNP200-202ENST00000429650 MADDQ8WXG6 1647 aa17.77■□□□□ 0.44
SNRNP200-202ENST00000429650 BLMP54132 1417 aaPredicted RBP17.77■□□□□ 0.44
SNRNP200-202ENST00000429650 IQGAP1P46940 1657 aa17.75■□□□□ 0.43
SNRNP200-202ENST00000429650 TRPM2O94759 1503 aa17.75■□□□□ 0.43
SNRNP200-202ENST00000429650 RTEL1-TNFRSF6BF6WH68 1400 aa17.75■□□□□ 0.43
SNRNP200-202ENST00000429650 ZFYVE16Q7Z3T8 1539 aa17.75■□□□□ 0.43
SNRNP200-202ENST00000429650 SPAG9O60271 1321 aaKnown RBP17.74■□□□□ 0.43
SNRNP200-202ENST00000429650 CEP152O94986 1710 aa17.74■□□□□ 0.43
SNRNP200-202ENST00000429650 SPHKAPQ2M3C7 1700 aa17.74■□□□□ 0.43
SNRNP200-202ENST00000429650 ARAP3Q8WWN8 1544 aa17.74■□□□□ 0.43
SNRNP200-202ENST00000429650 EXOC6Q8TAG9 804 aa17.73■□□□□ 0.43
SNRNP200-202ENST00000429650 WDR7Q9Y4E6 1490 aa17.73■□□□□ 0.43
SNRNP200-202ENST00000429650 CDCA7LQ96GN5 454 aa17.72■□□□□ 0.43
SNRNP200-202ENST00000429650 DEPDC5O75140 1603 aa17.72■□□□□ 0.43
SNRNP200-202ENST00000429650 PTPRTO14522 1441 aa17.72■□□□□ 0.43
SNRNP200-202ENST00000429650 CLTCL1P53675 1640 aa17.71■□□□□ 0.43
SNRNP200-202ENST00000429650 AFAP1Q8N556 730 aa17.71■□□□□ 0.43
SNRNP200-202ENST00000429650 TET3O43151 1660 aa17.69■□□□□ 0.42
SNRNP200-202ENST00000429650 SCAPERQ9BY12 1400 aa17.68■□□□□ 0.42
SNRNP200-202ENST00000429650 SCAF11Q99590 1463 aaKnown RBP17.68■□□□□ 0.42
SNRNP200-202ENST00000429650 STAC3Q96MF2 364 aa17.68■□□□□ 0.42
SNRNP200-202ENST00000429650 NOP58Q9Y2X3 529 aaKnown RBP17.68■□□□□ 0.42
SNRNP200-202ENST00000429650 SYNMO15061 1565 aa17.67■□□□□ 0.42
SNRNP200-202ENST00000429650 INO80Q9ULG1 1556 aaPredicted RBP17.66■□□□□ 0.42
SNRNP200-202ENST00000429650 KNSTRNQ9Y448 316 aa17.66■□□□□ 0.42
SNRNP200-202ENST00000429650 VWDEQ8N2E2 1590 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms