RNA–Protein interactions for RNA: ENST00000428848.7

CDH13-202, Transcript of cadherin 13, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CDH13, Length 2,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-202ENST00000428848 ROCK2O75116 1388 aaKnown RBP11.95□□□□□ -0.5
CDH13-202ENST00000428848 ANKRD50Q9ULJ7 1429 aa11.94□□□□□ -0.5
CDH13-202ENST00000428848 PKD2Q13563 968 aa11.94□□□□□ -0.5
CDH13-202ENST00000428848 PNISRQ8TF01 805 aaKnown RBP11.94□□□□□ -0.5
CDH13-202ENST00000428848 E9PCH4 1651 aa11.93□□□□□ -0.5
CDH13-202ENST00000428848 ARHGEF5Q12774 1597 aa11.93□□□□□ -0.5
CDH13-202ENST00000428848 ABCC2Q92887 1545 aa11.93□□□□□ -0.5
CDH13-202ENST00000428848 UBE2Q2Q8WVN8 375 aa11.92□□□□□ -0.5
CDH13-202ENST00000428848 LRPPRCP42704 1394 aaKnown RBP11.92□□□□□ -0.5
CDH13-202ENST00000428848 EIF5BO60841 1220 aaKnown RBP11.92□□□□□ -0.5
CDH13-202ENST00000428848 PREX2Q70Z35 1606 aa11.92□□□□□ -0.5
CDH13-202ENST00000428848 C9orf84Q5VXU9 1444 aa11.91□□□□□ -0.5
CDH13-202ENST00000428848 PLEKHH2Q8IVE3 1493 aa11.9□□□□□ -0.5
CDH13-202ENST00000428848 KTN1Q86UP2 1357 aaKnown RBP11.9□□□□□ -0.5
CDH13-202ENST00000428848 KIF15Q9NS87 1388 aa11.89□□□□□ -0.51
CDH13-202ENST00000428848 UHRF1BP1LA0JNW5 1464 aa11.89□□□□□ -0.51
CDH13-202ENST00000428848 CCDC141Q6ZP82 1450 aa11.88□□□□□ -0.51
CDH13-202ENST00000428848 BRD4O60885 1362 aaPredicted RBP11.88□□□□□ -0.51
CDH13-202ENST00000428848 ANO8Q9HCE9 1232 aaPredicted RBP11.88□□□□□ -0.51
CDH13-202ENST00000428848 CDC42BPBQ9Y5S2 1711 aa11.88□□□□□ -0.51
CDH13-202ENST00000428848 NOP58Q9Y2X3 529 aaKnown RBP11.87□□□□□ -0.51
CDH13-202ENST00000428848 NUP155O75694 1391 aa11.87□□□□□ -0.51
CDH13-202ENST00000428848 ZNF326Q5BKZ1 582 aaKnown RBP11.86□□□□□ -0.51
CDH13-202ENST00000428848 RALBP1Q15311 655 aa11.85□□□□□ -0.51
CDH13-202ENST00000428848 CARD11Q9BXL7 1154 aa11.85□□□□□ -0.51
CDH13-202ENST00000428848 SAMD9LQ8IVG5 1584 aa11.85□□□□□ -0.51
CDH13-202ENST00000428848 TMC1Q8TDI8 760 aa11.85□□□□□ -0.51
CDH13-202ENST00000428848 CCDC136Q96JN2 1154 aa11.85□□□□□ -0.51
CDH13-202ENST00000428848 MYO5CQ9NQX4 1742 aa11.85□□□□□ -0.51
CDH13-202ENST00000428848 MYBBP1AQ9BQG0 1328 aaKnown RBP11.85□□□□□ -0.51
CDH13-202ENST00000428848 MAST1Q9Y2H9 1570 aa11.84□□□□□ -0.51
CDH13-202ENST00000428848 NPM1P06748 294 aaKnown RBP eCLIP11.84□□□□□ -0.51
CDH13-202ENST00000428848 ARHGAP5Q13017 1502 aa11.84□□□□□ -0.51
CDH13-202ENST00000428848 ST20-MTHFSA0A0A6YYL1 179 aa11.84□□□□□ -0.51
CDH13-202ENST00000428848 POLR3GLQ9BT43 218 aa11.84□□□□□ -0.51
CDH13-202ENST00000428848 TRPM1Q7Z4N2 1603 aa11.83□□□□□ -0.51
CDH13-202ENST00000428848 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.83□□□□□ -0.52
CDH13-202ENST00000428848 TTC37Q6PGP7 1564 aa11.83□□□□□ -0.52
CDH13-202ENST00000428848 HNRNPMP52272 730 aaKnown RBP eCLIP11.83□□□□□ -0.52
CDH13-202ENST00000428848 ZCCHC11Q5TAX3 1644 aaKnown RBP11.83□□□□□ -0.52
CDH13-202ENST00000428848 PAK3O75914 559 aaPredicted RBP11.82□□□□□ -0.52
CDH13-202ENST00000428848 PARD3Q8TEW0 1356 aa11.82□□□□□ -0.52
CDH13-202ENST00000428848 LAMC1P11047 1609 aa11.81□□□□□ -0.52
CDH13-202ENST00000428848 FAM135AQ9P2D6 1515 aa11.8□□□□□ -0.52
CDH13-202ENST00000428848 FAM69CQ0P6D2 419 aa11.8□□□□□ -0.52
CDH13-202ENST00000428848 EFCAB2Q5VUJ9 269 aa11.8□□□□□ -0.52
CDH13-202ENST00000428848 PLXNC1O60486 1568 aa11.8□□□□□ -0.52
CDH13-202ENST00000428848 ARAP3Q8WWN8 1544 aa11.8□□□□□ -0.52
CDH13-202ENST00000428848 PRAG1Q86YV5 1406 aa11.8□□□□□ -0.52
CDH13-202ENST00000428848 INSRP06213 1382 aa11.8□□□□□ -0.52
CDH13-202ENST00000428848 GPRASP1Q5JY77 1395 aa11.8□□□□□ -0.52
CDH13-202ENST00000428848 CNGB1Q14028 1251 aaPredicted RBP11.79□□□□□ -0.52
CDH13-202ENST00000428848 IPO9Q96P70 1041 aaKnown RBP11.79□□□□□ -0.52
CDH13-202ENST00000428848 ZMYM4Q5VZL5 1548 aa11.79□□□□□ -0.52
CDH13-202ENST00000428848 RRP1P56182 461 aaKnown RBP11.79□□□□□ -0.52
CDH13-202ENST00000428848 PLCH2O75038 1416 aa11.79□□□□□ -0.52
CDH13-202ENST00000428848 PER1O15534 1290 aaPredicted RBP11.78□□□□□ -0.52
CDH13-202ENST00000428848 DCAF11Q8TEB1 546 aa11.78□□□□□ -0.52
CDH13-202ENST00000428848 PDE3BQ13370 1112 aa11.78□□□□□ -0.52
CDH13-202ENST00000428848 RTL5Q5HYW3 569 aaPredicted RBP11.78□□□□□ -0.52
CDH13-202ENST00000428848 SALL2Q9Y467 1007 aaPredicted RBP11.78□□□□□ -0.52
CDH13-202ENST00000428848 UNC13BO14795 1591 aa11.77□□□□□ -0.52
CDH13-202ENST00000428848 SYCP2Q9BX26 1530 aa11.77□□□□□ -0.52
CDH13-202ENST00000428848 NLRP13Q86W25 1043 aa11.77□□□□□ -0.53
CDH13-202ENST00000428848 KDM2AQ9Y2K7 1162 aa11.77□□□□□ -0.53
CDH13-202ENST00000428848 PRDM15P57071 1507 aaPredicted RBP11.76□□□□□ -0.53
CDH13-202ENST00000428848 KIF13AQ9H1H9 1805 aa11.76□□□□□ -0.53
CDH13-202ENST00000428848 ANP32AP39687 249 aaKnown RBP11.76□□□□□ -0.53
CDH13-202ENST00000428848 PLA2R1Q13018 1463 aa11.76□□□□□ -0.53
CDH13-202ENST00000428848 COL17A1Q9UMD9 1497 aaPredicted RBP11.76□□□□□ -0.53
CDH13-202ENST00000428848 WASHC2CQ9Y4E1 1318 aa11.76□□□□□ -0.53
CDH13-202ENST00000428848 NBR1Q14596 966 aa11.75□□□□□ -0.53
CDH13-202ENST00000428848 RCAN3Q9UKA8 241 aa11.75□□□□□ -0.53
CDH13-202ENST00000428848 DUOX2Q9NRD8 1548 aa11.75□□□□□ -0.53
CDH13-202ENST00000428848 SENP3-EIF4A1A0A087X0R7 540 aa11.75□□□□□ -0.53
CDH13-202ENST00000428848 ERBINQ96RT1 1412 aa11.74□□□□□ -0.53
CDH13-202ENST00000428848 EXOC6Q8TAG9 804 aa11.74□□□□□ -0.53
CDH13-202ENST00000428848 A2MP01023 1474 aa11.74□□□□□ -0.53
CDH13-202ENST00000428848 BLMP54132 1417 aaPredicted RBP11.74□□□□□ -0.53
CDH13-202ENST00000428848 TCERG1O14776 1098 aaKnown RBP11.74□□□□□ -0.53
CDH13-202ENST00000428848 ABCC1P33527 1531 aa11.73□□□□□ -0.53
CDH13-202ENST00000428848 CCDC144AA2RUR9 1427 aa11.73□□□□□ -0.53
CDH13-202ENST00000428848 IQGAP3Q86VI3 1631 aa11.73□□□□□ -0.53
CDH13-202ENST00000428848 TESK2Q96S53 571 aa11.72□□□□□ -0.53
CDH13-202ENST00000428848 EIF2AK4Q9P2K8 1649 aaKnown RBP11.72□□□□□ -0.53
CDH13-202ENST00000428848 RTEL1-TNFRSF6BF6WH68 1400 aa11.72□□□□□ -0.53
CDH13-202ENST00000428848 ATP10AO60312 1499 aa11.72□□□□□ -0.53
CDH13-202ENST00000428848 NBPF1Q3BBV0 1214 aa11.71□□□□□ -0.53
CDH13-202ENST00000428848 AEBP2Q6ZN18 517 aaPredicted RBP11.71□□□□□ -0.53
CDH13-202ENST00000428848 ZBTB47Q9UFB7 747 aaPredicted RBP11.71□□□□□ -0.53
CDH13-202ENST00000428848 MS4A1P11836 297 aa11.71□□□□□ -0.54
CDH13-202ENST00000428848 MAGI2Q86UL8 1455 aa11.71□□□□□ -0.54
CDH13-202ENST00000428848 WDR7Q9Y4E6 1490 aa11.71□□□□□ -0.54
CDH13-202ENST00000428848 RNF17Q9BXT8 1623 aaKnown RBP11.7□□□□□ -0.54
CDH13-202ENST00000428848 DISP3Q9P2K9 1392 aa11.7□□□□□ -0.54
CDH13-202ENST00000428848 DIP2BQ9P265 1576 aa11.7□□□□□ -0.54
CDH13-202ENST00000428848 ABCA9Q8IUA7 1624 aa11.7□□□□□ -0.54
CDH13-202ENST00000428848 BACH2Q9BYV9 841 aa11.69□□□□□ -0.54
CDH13-202ENST00000428848 PDE4AP27815 886 aa11.68□□□□□ -0.54
CDH13-202ENST00000428848 CDCA7LQ96GN5 454 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms