RNA–Protein interactions for RNA: ENST00000421182.5

FN1-207, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,103 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-207ENST00000421182 CHMP3Q9Y3E7 222 aa13.94□□□□□ -0.18
FN1-207ENST00000421182 CSPP1Q1MSJ5 1256 aa13.94□□□□□ -0.18
FN1-207ENST00000421182 PMFBP1Q8TBY8 1022 aa13.94□□□□□ -0.18
FN1-207ENST00000421182 TAOK2Q9UL54 1235 aa13.94□□□□□ -0.18
FN1-207ENST00000421182 C1orf141Q5JVX7 400 aa13.93□□□□□ -0.18
FN1-207ENST00000421182 SUPT6HQ7KZ85 1726 aaKnown RBP13.93□□□□□ -0.18
FN1-207ENST00000421182 WASHC2AQ641Q2 1341 aa13.93□□□□□ -0.18
FN1-207ENST00000421182 EVC2Q86UK5 1308 aa13.93□□□□□ -0.18
FN1-207ENST00000421182 TPM4P67936 248 aa13.93□□□□□ -0.18
FN1-207ENST00000421182 DCAF8L1A6NGE4 600 aa13.93□□□□□ -0.18
FN1-207ENST00000421182 DNMBPQ6XZF7 1577 aa13.92□□□□□ -0.18
FN1-207ENST00000421182 SYAP1Q96A49 352 aaPredicted RBP13.92□□□□□ -0.18
FN1-207ENST00000421182 HNRNPMP52272 730 aaKnown RBP eCLIP13.92□□□□□ -0.18
FN1-207ENST00000421182 ARHGAP5Q13017 1502 aa13.92□□□□□ -0.18
FN1-207ENST00000421182 FHOD3Q2V2M9 1422 aa13.91□□□□□ -0.18
FN1-207ENST00000421182 PLCB2Q00722 1185 aa13.91□□□□□ -0.18
FN1-207ENST00000421182 CGNL1Q0VF96 1302 aa13.9□□□□□ -0.18
FN1-207ENST00000421182 FRAT2O75474 233 aaPredicted RBP13.9□□□□□ -0.18
FN1-207ENST00000421182 STAC3Q96MF2 364 aa13.9□□□□□ -0.18
FN1-207ENST00000421182 RAB3GAP2Q9H2M9 1393 aa13.9□□□□□ -0.18
FN1-207ENST00000421182 AMOTL1Q8IY63 956 aa13.9□□□□□ -0.19
FN1-207ENST00000421182 SYNJ2O15056 1496 aa13.88□□□□□ -0.19
FN1-207ENST00000421182 KIF21BO75037 1637 aa13.88□□□□□ -0.19
FN1-207ENST00000421182 HECW1Q76N89 1606 aa13.88□□□□□ -0.19
FN1-207ENST00000421182 TPRNQ4KMQ1 711 aa13.88□□□□□ -0.19
FN1-207ENST00000421182 ITPRIPQ8IWB1 547 aa13.88□□□□□ -0.19
FN1-207ENST00000421182 DRC7Q8IY82 874 aa13.88□□□□□ -0.19
FN1-207ENST00000421182 FOXD1Q16676 465 aa13.88□□□□□ -0.19
FN1-207ENST00000421182 NOL10Q9BSC4 688 aaKnown RBP13.88□□□□□ -0.19
FN1-207ENST00000421182 COG3Q96JB2 828 aa13.88□□□□□ -0.19
FN1-207ENST00000421182 GBP4Q96PP9 640 aa13.88□□□□□ -0.19
FN1-207ENST00000421182 USP35Q9P2H5 1018 aa13.87□□□□□ -0.19
FN1-207ENST00000421182 HMGB2P26583 209 aaKnown RBP13.87□□□□□ -0.19
FN1-207ENST00000421182 KIF15Q9NS87 1388 aa13.87□□□□□ -0.19
FN1-207ENST00000421182 MIA2Q96PC5 1412 aa13.87□□□□□ -0.19
FN1-207ENST00000421182 HSPA5P11021 654 aaKnown RBP13.85□□□□□ -0.19
FN1-207ENST00000421182 SYNJ1O43426 1573 aa13.85□□□□□ -0.19
FN1-207ENST00000421182 SMC4Q9NTJ3 1288 aa13.85□□□□□ -0.19
FN1-207ENST00000421182 NEXNQ0ZGT2 675 aa13.85□□□□□ -0.19
FN1-207ENST00000421182 ATF3P18847 181 aa13.85□□□□□ -0.19
FN1-207ENST00000421182 TRIM34Q9BYJ4 488 aa13.84□□□□□ -0.19
FN1-207ENST00000421182 WWC1Q8IX03 1113 aa13.84□□□□□ -0.19
FN1-207ENST00000421182 RAD54L2Q9Y4B4 1467 aa13.84□□□□□ -0.19
FN1-207ENST00000421182 MYOM3Q5VTT5 1437 aa13.84□□□□□ -0.19
FN1-207ENST00000421182 TTC5Q8N0Z6 440 aa13.84□□□□□ -0.19
FN1-207ENST00000421182 PSME1Q06323 249 aa13.83□□□□□ -0.19
FN1-207ENST00000421182 PDE3BQ13370 1112 aa13.83□□□□□ -0.19
FN1-207ENST00000421182 NLRP13Q86W25 1043 aa13.83□□□□□ -0.2
FN1-207ENST00000421182 TOP2BQ02880 1626 aa13.83□□□□□ -0.2
FN1-207ENST00000421182 ROCK1Q13464 1354 aa13.83□□□□□ -0.2
FN1-207ENST00000421182 TRIM6-TRIM34B2RNG4 842 aa13.83□□□□□ -0.2
FN1-207ENST00000421182 RCAN3Q9UKA8 241 aa13.83□□□□□ -0.2
FN1-207ENST00000421182 CTTNBP2Q8WZ74 1663 aa13.83□□□□□ -0.2
FN1-207ENST00000421182 MSNP26038 577 aaKnown RBP13.82□□□□□ -0.2
FN1-207ENST00000421182 NGEFQ8N5V2 710 aa13.82□□□□□ -0.2
FN1-207ENST00000421182 PHF14O94880 888 aa13.81□□□□□ -0.2
FN1-207ENST00000421182 TEFQ10587 303 aa13.81□□□□□ -0.2
FN1-207ENST00000421182 HSP90B1P14625 803 aaKnown RBP13.81□□□□□ -0.2
FN1-207ENST00000421182 AQRO60306 1485 aaKnown RBP eCLIP13.81□□□□□ -0.29e-12■■■■■ 26.9
FN1-207ENST00000421182 NOC3LQ8WTT2 800 aaKnown RBP13.81□□□□□ -0.2
FN1-207ENST00000421182 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.8□□□□□ -0.2
FN1-207ENST00000421182 POGZQ7Z3K3 1410 aa13.8□□□□□ -0.2
FN1-207ENST00000421182 RRBP1Q9P2E9 1410 aaKnown RBP13.8□□□□□ -0.2
FN1-207ENST00000421182 RASSF8Q8NHQ8 419 aa13.8□□□□□ -0.2
FN1-207ENST00000421182 TCEAL9Q9UHQ7 104 aa13.8□□□□□ -0.2
FN1-207ENST00000421182 DDX58O95786 925 aaKnown RBP13.79□□□□□ -0.2
FN1-207ENST00000421182 NOP58Q9Y2X3 529 aaKnown RBP13.79□□□□□ -0.2
FN1-207ENST00000421182 PLEKHH2Q8IVE3 1493 aa13.79□□□□□ -0.2
FN1-207ENST00000421182 NESP48681 1621 aa13.78□□□□□ -0.2
FN1-207ENST00000421182 TOPBP1Q92547 1522 aa13.78□□□□□ -0.2
FN1-207ENST00000421182 CEP89Q96ST8 783 aa13.78□□□□□ -0.2
FN1-207ENST00000421182 KIF16BQ96L93 1317 aa13.78□□□□□ -0.2
FN1-207ENST00000421182 CENPJQ9HC77 1338 aaPredicted RBP13.78□□□□□ -0.2
FN1-207ENST00000421182 CTDP1Q9Y5B0 961 aaPredicted RBP13.78□□□□□ -0.2
FN1-207ENST00000421182 CFTRP13569 1480 aa13.78□□□□□ -0.2
FN1-207ENST00000421182 NCBP3Q53F19 620 aaKnown RBP13.78□□□□□ -0.2
FN1-207ENST00000421182 EFCAB5A4FU69 1503 aa13.78□□□□□ -0.2
FN1-207ENST00000421182 MARCH6O60337 910 aa13.77□□□□□ -0.2
FN1-207ENST00000421182 PHF23Q9BUL5 403 aaPredicted RBP13.77□□□□□ -0.2
FN1-207ENST00000421182 AKAP17AQ02040 695 aaKnown RBP13.77□□□□□ -0.2
FN1-207ENST00000421182 KIF21AQ7Z4S6 1674 aa13.77□□□□□ -0.2
FN1-207ENST00000421182 TCERG1O14776 1098 aaKnown RBP13.77□□□□□ -0.21
FN1-207ENST00000421182 SLC4A10Q6U841 1118 aa13.77□□□□□ -0.21
FN1-207ENST00000421182 LTV1Q96GA3 475 aaPredicted RBP13.77□□□□□ -0.21
FN1-207ENST00000421182 APBB1O00213 710 aa13.77□□□□□ -0.21
FN1-207ENST00000421182 ST18O60284 1047 aa13.77□□□□□ -0.21
FN1-207ENST00000421182 DHX57Q6P158 1386 aaKnown RBP13.77□□□□□ -0.21
FN1-207ENST00000421182 TRAK1Q9UPV9 953 aa13.76□□□□□ -0.21
FN1-207ENST00000421182 MSH5O43196 834 aa13.76□□□□□ -0.21
FN1-207ENST00000421182 SCAPERQ9BY12 1400 aa13.75□□□□□ -0.21
FN1-207ENST00000421182 VPS37DQ86XT2 251 aa13.75□□□□□ -0.21
FN1-207ENST00000421182 SYNE3Q6ZMZ3 975 aa13.75□□□□□ -0.21
FN1-207ENST00000421182 FYCO1Q9BQS8 1478 aa13.75□□□□□ -0.21
FN1-207ENST00000421182 SNAPC4Q5SXM2 1469 aa13.74□□□□□ -0.21
FN1-207ENST00000421182 ERICH3Q5RHP9 1530 aa13.74□□□□□ -0.21
FN1-207ENST00000421182 CPLX2Q6PUV4 134 aaKnown RBP13.74□□□□□ -0.21
FN1-207ENST00000421182 PRG4Q92954 1404 aaPredicted RBP13.74□□□□□ -0.21
FN1-207ENST00000421182 IQGAP2Q13576 1575 aa13.74□□□□□ -0.21
FN1-207ENST00000421182 VPS53Q5VIR6 699 aa13.74□□□□□ -0.21
FN1-207ENST00000421182 KIF14Q15058 1648 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms