RNA–Protein interactions for RNA: ENST00000418800.6

DDR1-232, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene DDR1, Length 3,588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-232ENST00000418800 ROCK2O75116 1388 aaKnown RBP15.09■□□□□ 0.01
DDR1-232ENST00000418800 RRAGDQ9NQL2 400 aaPredicted RBP15.08■□□□□ 0
DDR1-232ENST00000418800 ADAMTS8Q9UP79 889 aa15.08■□□□□ 0
DDR1-232ENST00000418800 NBPF1Q3BBV0 1214 aa15.07■□□□□ 0
DDR1-232ENST00000418800 CLUAP1Q96AJ1 413 aa15.07■□□□□ 0
DDR1-232ENST00000418800 PTPN23Q9H3S7 1636 aa15.07■□□□□ 0
DDR1-232ENST00000418800 L1TD1Q5T7N2 865 aaKnown RBP15.06■□□□□ 0
DDR1-232ENST00000418800 FYCO1Q9BQS8 1478 aa15.06■□□□□ 0
DDR1-232ENST00000418800 ZBTB7CA1YPR0 619 aa15.06■□□□□ 0
DDR1-232ENST00000418800 GOLGA6L3A6NEY3 463 aa15.06■□□□□ 0
DDR1-232ENST00000418800 BCL2L13Q9BXK5 485 aa15.06■□□□□ 0
DDR1-232ENST00000418800 GRIN2BQ13224 1484 aa15.05■□□□□ -0
DDR1-232ENST00000418800 JPH4Q96JJ6 628 aa15.04■□□□□ -0
DDR1-232ENST00000418800 PDE3BQ13370 1112 aa15.04■□□□□ -0
DDR1-232ENST00000418800 ADAMTS12P58397 1594 aa15.04■□□□□ -0
DDR1-232ENST00000418800 ANKRD30BQ9BXX2 1392 aa15.03■□□□□ -0
DDR1-232ENST00000418800 COG6Q9Y2V7 657 aa15.03■□□□□ -0
DDR1-232ENST00000418800 GOLGA2Q08379 1002 aa15.02□□□□□ -0.01
DDR1-232ENST00000418800 CENPQQ7L2Z9 268 aaPredicted RBP15.02□□□□□ -0.01
DDR1-232ENST00000418800 BCAR3O75815 825 aa15.01□□□□□ -0.01
DDR1-232ENST00000418800 HNRNPMP52272 730 aaKnown RBP eCLIP15.01□□□□□ -0.01
DDR1-232ENST00000418800 PANK2Q9BZ23 570 aa15.01□□□□□ -0.01
DDR1-232ENST00000418800 PODXL2Q9NZ53 605 aa15.01□□□□□ -0.01
DDR1-232ENST00000418800 RRP7AQ9Y3A4 280 aaKnown RBP15.01□□□□□ -0.01
DDR1-232ENST00000418800 MAP3K1Q13233 1512 aa15.01□□□□□ -0.01
DDR1-232ENST00000418800 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.01□□□□□ -0.01
DDR1-232ENST00000418800 SNAPC4Q5SXM2 1469 aa15.01□□□□□ -0.01
DDR1-232ENST00000418800 APAF1O14727 1248 aa15□□□□□ -0.01
DDR1-232ENST00000418800 CDK13Q14004 1512 aaKnown RBP15□□□□□ -0.01
DDR1-232ENST00000418800 DHX29Q7Z478 1369 aaKnown RBP14.99□□□□□ -0.01
DDR1-232ENST00000418800 PANK1Q8TE04 598 aa14.98□□□□□ -0.01
DDR1-232ENST00000418800 FOXD4L1Q9NU39 408 aa14.98□□□□□ -0.01
DDR1-232ENST00000418800 RNF123Q5XPI4 1314 aa14.98□□□□□ -0.01
DDR1-232ENST00000418800 PLEKHG5O94827 1062 aa14.97□□□□□ -0.01
DDR1-232ENST00000418800 TMF1P82094 1093 aa14.97□□□□□ -0.01
DDR1-232ENST00000418800 MYH16Q9H6N6 1097 aa14.97□□□□□ -0.01
DDR1-232ENST00000418800 BRD4O60885 1362 aaPredicted RBP14.97□□□□□ -0.01
DDR1-232ENST00000418800 PLEKHD1A6NEE1 506 aa14.96□□□□□ -0.01
DDR1-232ENST00000418800 CHGAP10645 457 aaKnown RBP14.96□□□□□ -0.01
DDR1-232ENST00000418800 CTTNBP2Q8WZ74 1663 aa14.96□□□□□ -0.01
DDR1-232ENST00000418800 MFAP1P55081 439 aaKnown RBP14.95□□□□□ -0.02
DDR1-232ENST00000418800 PLPPR3Q6T4P5 718 aa14.95□□□□□ -0.02
DDR1-232ENST00000418800 RBM10P98175 930 aaKnown RBP14.94□□□□□ -0.02
DDR1-232ENST00000418800 MAGI1Q96QZ7 1491 aaPredicted RBP14.93□□□□□ -0.02
DDR1-232ENST00000418800 ANP32BQ92688 251 aaKnown RBP14.92□□□□□ -0.02
DDR1-232ENST00000418800 SEC24BO95487 1268 aa14.92□□□□□ -0.02
DDR1-232ENST00000418800 NCLP19338 710 aaKnown RBP14.92□□□□□ -0.02
DDR1-232ENST00000418800 RPRD2Q5VT52 1461 aaKnown RBP14.91□□□□□ -0.02
DDR1-232ENST00000418800 C8orf34Q49A92 452 aa14.9□□□□□ -0.02
DDR1-232ENST00000418800 FAM13BQ9NYF5 915 aa14.9□□□□□ -0.02
DDR1-232ENST00000418800 TPRNQ4KMQ1 711 aa14.9□□□□□ -0.02
DDR1-232ENST00000418800 SLC24A1O60721 1099 aa14.9□□□□□ -0.02
DDR1-232ENST00000418800 XRCC6P12956 609 aaKnown RBP eCLIP14.9□□□□□ -0.02
DDR1-232ENST00000418800 PRG4Q92954 1404 aaPredicted RBP14.9□□□□□ -0.02
DDR1-232ENST00000418800 AMER1Q5JTC6 1135 aaPredicted RBP14.89□□□□□ -0.03
DDR1-232ENST00000418800 GRIN2AQ12879 1464 aa14.89□□□□□ -0.03
DDR1-232ENST00000418800 KDM6BO15054 1643 aa14.89□□□□□ -0.03
DDR1-232ENST00000418800 IGHDP01880 384 aa14.88□□□□□ -0.03
DDR1-232ENST00000418800 SYNJ2O15056 1496 aa14.88□□□□□ -0.03
DDR1-232ENST00000418800 PLB1Q6P1J6 1458 aa14.88□□□□□ -0.03
DDR1-232ENST00000418800 FTSJ3Q8IY81 847 aaKnown RBP14.88□□□□□ -0.03
DDR1-232ENST00000418800 ANKRD30AQ9BXX3 1397 aa14.88□□□□□ -0.03
DDR1-232ENST00000418800 RRP9O43818 475 aaKnown RBP14.87□□□□□ -0.03
DDR1-232ENST00000418800 DAPK1P53355 1430 aa14.85□□□□□ -0.03
DDR1-232ENST00000418800 TRAK2O60296 914 aa14.85□□□□□ -0.03
DDR1-232ENST00000418800 CENPJQ9HC77 1338 aaPredicted RBP14.84□□□□□ -0.03
DDR1-232ENST00000418800 PPP2R1AP30153 589 aa14.84□□□□□ -0.03
DDR1-232ENST00000418800 CEP170Q5SW79 1584 aa14.84□□□□□ -0.03
DDR1-232ENST00000418800 KDM5BQ9UGL1 1544 aa14.84□□□□□ -0.03
DDR1-232ENST00000418800 DUSP27Q5VZP5 1158 aa14.84□□□□□ -0.03
DDR1-232ENST00000418800 SUPT6HQ7KZ85 1726 aaKnown RBP14.84□□□□□ -0.03
DDR1-232ENST00000418800 ABCC5O15440 1437 aa14.84□□□□□ -0.03
DDR1-232ENST00000418800 SPATA31E1Q6ZUB1 1445 aa14.84□□□□□ -0.03
DDR1-232ENST00000418800 ESPNB1AK53 854 aa14.83□□□□□ -0.03
DDR1-232ENST00000418800 MIA2Q96PC5 1412 aa14.83□□□□□ -0.04
DDR1-232ENST00000418800 SPINK5Q9NQ38 1064 aaPredicted RBP14.83□□□□□ -0.04
DDR1-232ENST00000418800 IQGAP2Q13576 1575 aa14.83□□□□□ -0.04
DDR1-232ENST00000418800 CFAP43Q8NDM7 1665 aa14.82□□□□□ -0.04
DDR1-232ENST00000418800 DENND4BO75064 1496 aaPredicted RBP14.82□□□□□ -0.04
DDR1-232ENST00000418800 EFCAB5A4FU69 1503 aa14.82□□□□□ -0.04
DDR1-232ENST00000418800 KIAA1107Q9UPP5 1409 aa14.82□□□□□ -0.04
DDR1-232ENST00000418800 MSNP26038 577 aaKnown RBP14.82□□□□□ -0.04
DDR1-232ENST00000418800 CHD1O14646 1710 aa14.81□□□□□ -0.04
DDR1-232ENST00000418800 ANKRD50Q9ULJ7 1429 aa14.81□□□□□ -0.04
DDR1-232ENST00000418800 HSP90AB1P08238 724 aaKnown RBP14.81□□□□□ -0.04
DDR1-232ENST00000418800 HSCBQ8IWL3 235 aa14.8□□□□□ -0.04
DDR1-232ENST00000418800 TNNQ9UQP3 1299 aa14.8□□□□□ -0.04
DDR1-232ENST00000418800 SAMD9Q5K651 1589 aa14.8□□□□□ -0.04
DDR1-232ENST00000418800 EHBP1L1Q8N3D4 1523 aa14.8□□□□□ -0.04
DDR1-232ENST00000418800 MCM4P33991 863 aa14.79□□□□□ -0.04
DDR1-232ENST00000418800 KIAA1211Q6ZU35 1233 aa14.79□□□□□ -0.04
DDR1-232ENST00000418800 NUP160Q12769 1436 aa14.78□□□□□ -0.04
DDR1-232ENST00000418800 U2SURPO15042 1029 aaKnown RBP14.78□□□□□ -0.04
DDR1-232ENST00000418800 SAFB2Q14151 953 aaKnown RBP eCLIP14.78□□□□□ -0.04
DDR1-232ENST00000418800 PDZRN3Q9UPQ7 1066 aa14.78□□□□□ -0.04
DDR1-232ENST00000418800 LRPPRCP42704 1394 aaKnown RBP14.78□□□□□ -0.04
DDR1-232ENST00000418800 EPRSP07814 1512 aaKnown RBP14.78□□□□□ -0.04
DDR1-232ENST00000418800 KIAA0586Q9BVV6 1533 aa14.78□□□□□ -0.04
DDR1-232ENST00000418800 PRDM10Q9NQV6 1147 aa14.78□□□□□ -0.04
DDR1-232ENST00000418800 CLCN1P35523 988 aa14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms