RNA–Protein interactions for RNA: ENST00000417344.2

CCNT1-202, Transcript of cyclin T1, humanhuman

TSL 2

Gene CCNT1, Length 2,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-202ENST00000417344 SMG6Q86US8 1419 aaKnown RBP8.49□□□□□ -1.05
CCNT1-202ENST00000417344 CCDC184Q52MB2 194 aa8.49□□□□□ -1.05
CCNT1-202ENST00000417344 FAM9BQ8IZU0 186 aa8.49□□□□□ -1.05
CCNT1-202ENST00000417344 BACH2Q9BYV9 841 aa8.49□□□□□ -1.05
CCNT1-202ENST00000417344 AKNAQ7Z591 1439 aa8.48□□□□□ -1.05
CCNT1-202ENST00000417344 HSP90AA1P07900 732 aaKnown RBP8.48□□□□□ -1.05
CCNT1-202ENST00000417344 ATN1P54259 1190 aaPredicted RBP8.48□□□□□ -1.05
CCNT1-202ENST00000417344 DCBLD2Q96PD2 775 aa8.48□□□□□ -1.05
CCNT1-202ENST00000417344 RRAGDQ9NQL2 400 aaPredicted RBP8.47□□□□□ -1.05
CCNT1-202ENST00000417344 TOP2AP11388 1531 aaKnown RBP8.47□□□□□ -1.05
CCNT1-202ENST00000417344 ARAP1Q96P48 1450 aa8.47□□□□□ -1.05
CCNT1-202ENST00000417344 MS4A1P11836 297 aa8.46□□□□□ -1.05
CCNT1-202ENST00000417344 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.46□□□□□ -1.051e-7■■□□□ 12.1
CCNT1-202ENST00000417344 NAP1L5Q96NT1 182 aaPredicted RBP8.46□□□□□ -1.06
CCNT1-202ENST00000417344 NUDCQ9Y266 331 aa8.46□□□□□ -1.06
CCNT1-202ENST00000417344 MS4A4AQ96JQ5 239 aa8.45□□□□□ -1.06
CCNT1-202ENST00000417344 MRS2Q9HD23 443 aa8.45□□□□□ -1.06
CCNT1-202ENST00000417344 TONSLQ96HA7 1378 aa8.45□□□□□ -1.06
CCNT1-202ENST00000417344 RBM10P98175 930 aaKnown RBP8.44□□□□□ -1.06
CCNT1-202ENST00000417344 FHAD1B1AJZ9 1412 aa8.44□□□□□ -1.06
CCNT1-202ENST00000417344 KDM2AQ9Y2K7 1162 aa8.44□□□□□ -1.06
CCNT1-202ENST00000417344 A0A0U1RQG5 324 aaPredicted RBP8.43□□□□□ -1.06
CCNT1-202ENST00000417344 PRKRIP1Q9H875 184 aaPredicted RBP8.43□□□□□ -1.06
CCNT1-202ENST00000417344 CNTLNQ9NXG0 1405 aa8.43□□□□□ -1.06
CCNT1-202ENST00000417344 SYNJ1O43426 1573 aa8.43□□□□□ -1.06
CCNT1-202ENST00000417344 AAMPQ13685 434 aa8.42□□□□□ -1.06
CCNT1-202ENST00000417344 PNNQ9H307 717 aaKnown RBP8.42□□□□□ -1.06
CCNT1-202ENST00000417344 IRX5P78411 483 aaPredicted RBP8.42□□□□□ -1.06
CCNT1-202ENST00000417344 FGD1P98174 961 aa8.42□□□□□ -1.06
CCNT1-202ENST00000417344 SLC39A7Q92504 469 aa8.42□□□□□ -1.06
CCNT1-202ENST00000417344 OCEL1Q9H607 264 aa8.42□□□□□ -1.06
CCNT1-202ENST00000417344 NCOA2Q15596 1464 aa8.41□□□□□ -1.06
CCNT1-202ENST00000417344 FRAT2O75474 233 aaPredicted RBP8.41□□□□□ -1.06
CCNT1-202ENST00000417344 PPP1R37O75864 691 aa8.41□□□□□ -1.06
CCNT1-202ENST00000417344 CLCN1P35523 988 aa8.4□□□□□ -1.06
CCNT1-202ENST00000417344 SLC4A3P48751 1232 aa8.4□□□□□ -1.06
CCNT1-202ENST00000417344 PDCD7Q8N8D1 485 aaKnown RBP8.4□□□□□ -1.06
CCNT1-202ENST00000417344 C7P10643 843 aa8.39□□□□□ -1.07
CCNT1-202ENST00000417344 PLCG2P16885 1265 aa8.39□□□□□ -1.07
CCNT1-202ENST00000417344 L1TD1Q5T7N2 865 aaKnown RBP8.39□□□□□ -1.07
CCNT1-202ENST00000417344 HSPA5P11021 654 aaKnown RBP8.37□□□□□ -1.07
CCNT1-202ENST00000417344 CENPJQ9HC77 1338 aaPredicted RBP8.37□□□□□ -1.07
CCNT1-202ENST00000417344 CALD1Q05682 793 aaKnown RBP8.37□□□□□ -1.07
CCNT1-202ENST00000417344 PDE4CQ08493 712 aa8.37□□□□□ -1.07
CCNT1-202ENST00000417344 PRDM4Q9UKN5 801 aa8.36□□□□□ -1.07
CCNT1-202ENST00000417344 SEC24BO95487 1268 aa8.36□□□□□ -1.07
CCNT1-202ENST00000417344 EXOC6Q8TAG9 804 aa8.36□□□□□ -1.07
CCNT1-202ENST00000417344 L3MBTL3Q96JM7 780 aaPredicted RBP8.36□□□□□ -1.07
CCNT1-202ENST00000417344 RRP1P56182 461 aaKnown RBP8.35□□□□□ -1.07
CCNT1-202ENST00000417344 ERICH3Q5RHP9 1530 aa8.35□□□□□ -1.07
CCNT1-202ENST00000417344 CADPS2Q86UW7 1296 aa8.35□□□□□ -1.07
CCNT1-202ENST00000417344 PDCL3Q9H2J4 239 aa8.35□□□□□ -1.07
CCNT1-202ENST00000417344 G3V3G9 751 aa8.34□□□□□ -1.07
CCNT1-202ENST00000417344 WDR70Q9NW82 654 aa8.34□□□□□ -1.07
CCNT1-202ENST00000417344 POGKQ9P215 609 aa8.34□□□□□ -1.07
CCNT1-202ENST00000417344 POTEIP0CG38 1075 aa8.34□□□□□ -1.07
CCNT1-202ENST00000417344 EIF4G2P78344 907 aaKnown RBP eCLIP8.34□□□□□ -1.07
CCNT1-202ENST00000417344 FAM50AQ14320 339 aaKnown RBP8.34□□□□□ -1.07
CCNT1-202ENST00000417344 P3H3Q8IVL6 736 aa8.34□□□□□ -1.07
CCNT1-202ENST00000417344 METRNQ9UJH8 293 aa8.34□□□□□ -1.07
CCNT1-202ENST00000417344 TMEM121BQ9BXQ6 578 aaPredicted RBP8.33□□□□□ -1.08
CCNT1-202ENST00000417344 BOLA1Q9Y3E2 137 aa8.33□□□□□ -1.08
CCNT1-202ENST00000417344 KDM5BQ9UGL1 1544 aa8.33□□□□□ -1.08
CCNT1-202ENST00000417344 MICALL2Q8IY33 904 aa8.32□□□□□ -1.08
CCNT1-202ENST00000417344 NCOA1Q15788 1441 aa8.32□□□□□ -1.08
CCNT1-202ENST00000417344 PHLDB1Q86UU1 1377 aa8.32□□□□□ -1.08
CCNT1-202ENST00000417344 CCDC7Q96M83 1385 aa8.32□□□□□ -1.08
CCNT1-202ENST00000417344 PRXQ9BXM0 1461 aa8.32□□□□□ -1.08
CCNT1-202ENST00000417344 TPM2P07951 284 aa8.31□□□□□ -1.08
CCNT1-202ENST00000417344 DPY19L2Q6NUT2 758 aa8.31□□□□□ -1.08
CCNT1-202ENST00000417344 CRISPLD2Q9H0B8 497 aa8.31□□□□□ -1.08
CCNT1-202ENST00000417344 MAP3K1Q13233 1512 aa8.31□□□□□ -1.08
CCNT1-202ENST00000417344 RGS3P49796 1198 aa8.3□□□□□ -1.08
CCNT1-202ENST00000417344 XRCC6P12956 609 aaKnown RBP eCLIP8.3□□□□□ -1.08
CCNT1-202ENST00000417344 MFSD10Q14728 455 aa8.3□□□□□ -1.08
CCNT1-202ENST00000417344 TIAM1Q13009 1591 aa8.29□□□□□ -1.08
CCNT1-202ENST00000417344 COLQQ9Y215 455 aaPredicted RBP8.29□□□□□ -1.08
CCNT1-202ENST00000417344 ARHGAP35Q9NRY4 1499 aa8.29□□□□□ -1.08
CCNT1-202ENST00000417344 NCKAP5LQ9HCH0 1330 aa8.29□□□□□ -1.08
CCNT1-202ENST00000417344 GOLGA6L3A6NEY3 463 aa8.29□□□□□ -1.08
CCNT1-202ENST00000417344 LRRC9Q6ZRR7 1453 aa8.28□□□□□ -1.08
CCNT1-202ENST00000417344 UACAQ9BZF9 1416 aa8.28□□□□□ -1.08
CCNT1-202ENST00000417344 PDIA4P13667 645 aaKnown RBP8.28□□□□□ -1.08
CCNT1-202ENST00000417344 FAM161AQ3B820 660 aa8.28□□□□□ -1.08
CCNT1-202ENST00000417344 SKAP1Q86WV1 359 aa8.28□□□□□ -1.08
CCNT1-202ENST00000417344 RCAN3Q9UKA8 241 aa8.28□□□□□ -1.08
CCNT1-202ENST00000417344 FSD2A1L4K1 749 aa8.27□□□□□ -1.09
CCNT1-202ENST00000417344 DDX27Q96GQ7 796 aaKnown RBP8.27□□□□□ -1.09
CCNT1-202ENST00000417344 GPHNQ9NQX3 736 aaPredicted RBP8.27□□□□□ -1.09
CCNT1-202ENST00000417344 SMARCA4P51532 1647 aa8.26□□□□□ -1.09
CCNT1-202ENST00000417344 ARID4BQ4LE39 1312 aaPredicted RBP8.26□□□□□ -1.09
CCNT1-202ENST00000417344 CCDC18Q5T9S5 1454 aa8.26□□□□□ -1.09
CCNT1-202ENST00000417344 POTEFA5A3E0 1075 aa8.26□□□□□ -1.09
CCNT1-202ENST00000417344 C8orf34Q49A92 452 aa8.26□□□□□ -1.09
CCNT1-202ENST00000417344 PANK2Q9BZ23 570 aa8.26□□□□□ -1.09
CCNT1-202ENST00000417344 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.26□□□□□ -1.09
CCNT1-202ENST00000417344 ESPNB1AK53 854 aa8.25□□□□□ -1.09
CCNT1-202ENST00000417344 ARXQ96QS3 562 aa8.25□□□□□ -1.09
CCNT1-202ENST00000417344 LARP6Q9BRS8 491 aaKnown RBP8.25□□□□□ -1.09
CCNT1-202ENST00000417344 SENP3-EIF4A1A0A087X0R7 540 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms