RNA–Protein interactions for RNA: ENST00000416277.5

VWA3B-202, Transcript of von Willebrand factor A domain containing 3B, humanhuman

TSL 1 (best)

Gene VWA3B, Length 2,827 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VWA3B-202ENST00000416277 DEKP35659 375 aaKnown RBP18.62■□□□□ 0.57
VWA3B-202ENST00000416277 CCDC136Q96JN2 1154 aa18.62■□□□□ 0.57
VWA3B-202ENST00000416277 FAM135AQ9P2D6 1515 aa18.6■□□□□ 0.57
VWA3B-202ENST00000416277 FANCIQ9NVI1 1328 aa18.59■□□□□ 0.57
VWA3B-202ENST00000416277 MAST1Q9Y2H9 1570 aa18.59■□□□□ 0.57
VWA3B-202ENST00000416277 CARD11Q9BXL7 1154 aa18.59■□□□□ 0.57
VWA3B-202ENST00000416277 UNC13BO14795 1591 aa18.58■□□□□ 0.56
VWA3B-202ENST00000416277 HNRNPMP52272 730 aaKnown RBP eCLIP18.57■□□□□ 0.56
VWA3B-202ENST00000416277 POLR3GLQ9BT43 218 aa18.57■□□□□ 0.56
VWA3B-202ENST00000416277 TRPM1Q7Z4N2 1603 aa18.57■□□□□ 0.56
VWA3B-202ENST00000416277 KTN1Q86UP2 1357 aaKnown RBP18.55■□□□□ 0.56
VWA3B-202ENST00000416277 RSPH4AQ5TD94 716 aa18.55■□□□□ 0.56
VWA3B-202ENST00000416277 NUDCQ9Y266 331 aa18.54■□□□□ 0.56
VWA3B-202ENST00000416277 SYCP2Q9BX26 1530 aa18.53■□□□□ 0.56
VWA3B-202ENST00000416277 TTC37Q6PGP7 1564 aa18.52■□□□□ 0.56
VWA3B-202ENST00000416277 RNF123Q5XPI4 1314 aa18.52■□□□□ 0.56
VWA3B-202ENST00000416277 PNISRQ8TF01 805 aaKnown RBP18.52■□□□□ 0.56
VWA3B-202ENST00000416277 PLXNC1O60486 1568 aa18.52■□□□□ 0.56
VWA3B-202ENST00000416277 PKNOX2Q96KN3 472 aa18.52■□□□□ 0.55
VWA3B-202ENST00000416277 LAMC1P11047 1609 aa18.52■□□□□ 0.55
VWA3B-202ENST00000416277 SHROOM2Q13796 1616 aa18.52■□□□□ 0.55
VWA3B-202ENST00000416277 CHD1O14646 1710 aa18.51■□□□□ 0.55
VWA3B-202ENST00000416277 DCAF11Q8TEB1 546 aa18.51■□□□□ 0.55
VWA3B-202ENST00000416277 PRAG1Q86YV5 1406 aa18.51■□□□□ 0.55
VWA3B-202ENST00000416277 LRPPRCP42704 1394 aaKnown RBP18.51■□□□□ 0.55
VWA3B-202ENST00000416277 ST20-MTHFSA0A0A6YYL1 179 aa18.5■□□□□ 0.55
VWA3B-202ENST00000416277 B4GALNT3Q6L9W6 998 aa18.5■□□□□ 0.55
VWA3B-202ENST00000416277 IQGAP3Q86VI3 1631 aa18.5■□□□□ 0.55
VWA3B-202ENST00000416277 BRD4O60885 1362 aaPredicted RBP18.5■□□□□ 0.55
VWA3B-202ENST00000416277 MYO5CQ9NQX4 1742 aa18.5■□□□□ 0.55
VWA3B-202ENST00000416277 KDM2AQ9Y2K7 1162 aa18.5■□□□□ 0.55
VWA3B-202ENST00000416277 CCDC144AA2RUR9 1427 aa18.49■□□□□ 0.55
VWA3B-202ENST00000416277 ARHGAP5Q13017 1502 aa18.49■□□□□ 0.55
VWA3B-202ENST00000416277 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.49■□□□□ 0.55
VWA3B-202ENST00000416277 TMC1Q8TDI8 760 aa18.48■□□□□ 0.55
VWA3B-202ENST00000416277 MYBBP1AQ9BQG0 1328 aaKnown RBP18.48■□□□□ 0.55
VWA3B-202ENST00000416277 RALBP1Q15311 655 aa18.47■□□□□ 0.55
VWA3B-202ENST00000416277 CNGB1Q14028 1251 aaPredicted RBP18.47■□□□□ 0.55
VWA3B-202ENST00000416277 PLEKHH2Q8IVE3 1493 aa18.46■□□□□ 0.55
VWA3B-202ENST00000416277 GPRASP1Q5JY77 1395 aa18.46■□□□□ 0.55
VWA3B-202ENST00000416277 PLA2R1Q13018 1463 aa18.46■□□□□ 0.55
VWA3B-202ENST00000416277 EIF2AK4Q9P2K8 1649 aaKnown RBP18.45■□□□□ 0.54
VWA3B-202ENST00000416277 PRDM15P57071 1507 aaPredicted RBP18.44■□□□□ 0.54
VWA3B-202ENST00000416277 A2MP01023 1474 aa18.44■□□□□ 0.54
VWA3B-202ENST00000416277 MAGI2Q86UL8 1455 aa18.44■□□□□ 0.54
VWA3B-202ENST00000416277 ABCC2Q92887 1545 aa18.44■□□□□ 0.54
VWA3B-202ENST00000416277 PLEKHG5O94827 1062 aa18.44■□□□□ 0.54
VWA3B-202ENST00000416277 DUOX2Q9NRD8 1548 aa18.42■□□□□ 0.54
VWA3B-202ENST00000416277 COL17A1Q9UMD9 1497 aaPredicted RBP18.42■□□□□ 0.54
VWA3B-202ENST00000416277 ATP10AO60312 1499 aa18.41■□□□□ 0.54
VWA3B-202ENST00000416277 PARD3Q8TEW0 1356 aa18.41■□□□□ 0.54
VWA3B-202ENST00000416277 RNF17Q9BXT8 1623 aaKnown RBP18.38■□□□□ 0.53
VWA3B-202ENST00000416277 ERBINQ96RT1 1412 aa18.38■□□□□ 0.53
VWA3B-202ENST00000416277 NLRP13Q86W25 1043 aa18.36■□□□□ 0.53
VWA3B-202ENST00000416277 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.36■□□□□ 0.53
VWA3B-202ENST00000416277 ERCC6L2Q5T890 1561 aa18.35■□□□□ 0.53
VWA3B-202ENST00000416277 NBPF1Q3BBV0 1214 aa18.35■□□□□ 0.53
VWA3B-202ENST00000416277 ZMYM4Q5VZL5 1548 aa18.34■□□□□ 0.53
VWA3B-202ENST00000416277 WASHC2CQ9Y4E1 1318 aa18.34■□□□□ 0.53
VWA3B-202ENST00000416277 ABCC1P33527 1531 aa18.33■□□□□ 0.53
VWA3B-202ENST00000416277 PER1O15534 1290 aaPredicted RBP18.33■□□□□ 0.52
VWA3B-202ENST00000416277 RGL3Q3MIN7 710 aa18.33■□□□□ 0.52
VWA3B-202ENST00000416277 PODXL2Q9NZ53 605 aa18.33■□□□□ 0.52
VWA3B-202ENST00000416277 INSRP06213 1382 aa18.33■□□□□ 0.52
VWA3B-202ENST00000416277 ZCCHC11Q5TAX3 1644 aaKnown RBP18.32■□□□□ 0.52
VWA3B-202ENST00000416277 TESK2Q96S53 571 aa18.32■□□□□ 0.52
VWA3B-202ENST00000416277 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.32■□□□□ 0.52
VWA3B-202ENST00000416277 PLCH2O75038 1416 aa18.32■□□□□ 0.52
VWA3B-202ENST00000416277 DISP3Q9P2K9 1392 aa18.31■□□□□ 0.52
VWA3B-202ENST00000416277 PDE3BQ13370 1112 aa18.29■□□□□ 0.52
VWA3B-202ENST00000416277 SENP3-EIF4A1A0A087X0R7 540 aa18.29■□□□□ 0.52
VWA3B-202ENST00000416277 UHRF1BP1LA0JNW5 1464 aa18.28■□□□□ 0.52
VWA3B-202ENST00000416277 MADDQ8WXG6 1647 aa18.28■□□□□ 0.52
VWA3B-202ENST00000416277 BLMP54132 1417 aaPredicted RBP18.28■□□□□ 0.52
VWA3B-202ENST00000416277 IQGAP1P46940 1657 aa18.28■□□□□ 0.52
VWA3B-202ENST00000416277 RRP1P56182 461 aaKnown RBP18.27■□□□□ 0.52
VWA3B-202ENST00000416277 CEP152O94986 1710 aa18.26■□□□□ 0.51
VWA3B-202ENST00000416277 SPHKAPQ2M3C7 1700 aa18.26■□□□□ 0.51
VWA3B-202ENST00000416277 TMF1P82094 1093 aa18.25■□□□□ 0.51
VWA3B-202ENST00000416277 TRPM2O94759 1503 aa18.24■□□□□ 0.51
VWA3B-202ENST00000416277 ARAP3Q8WWN8 1544 aa18.24■□□□□ 0.51
VWA3B-202ENST00000416277 EFCAB2Q5VUJ9 269 aa18.24■□□□□ 0.51
VWA3B-202ENST00000416277 RCAN3Q9UKA8 241 aa18.24■□□□□ 0.51
VWA3B-202ENST00000416277 CLASP1Q7Z460 1538 aa18.23■□□□□ 0.51
VWA3B-202ENST00000416277 DEPDC5O75140 1603 aa18.23■□□□□ 0.51
VWA3B-202ENST00000416277 TRAPPC8Q9Y2L5 1435 aa18.23■□□□□ 0.51
VWA3B-202ENST00000416277 ZFYVE16Q7Z3T8 1539 aa18.22■□□□□ 0.51
VWA3B-202ENST00000416277 PANK3Q9H999 370 aa18.22■□□□□ 0.51
VWA3B-202ENST00000416277 RTEL1-TNFRSF6BF6WH68 1400 aa18.21■□□□□ 0.51
VWA3B-202ENST00000416277 IL27Q8NEV9 243 aa18.21■□□□□ 0.51
VWA3B-202ENST00000416277 CC2D1BQ5T0F9 858 aaKnown RBP18.2■□□□□ 0.5
VWA3B-202ENST00000416277 WDR7Q9Y4E6 1490 aa18.2■□□□□ 0.5
VWA3B-202ENST00000416277 TET3O43151 1660 aa18.19■□□□□ 0.5
VWA3B-202ENST00000416277 SYNMO15061 1565 aa18.19■□□□□ 0.5
VWA3B-202ENST00000416277 CLTCL1P53675 1640 aa18.18■□□□□ 0.5
VWA3B-202ENST00000416277 NOP58Q9Y2X3 529 aaKnown RBP18.18■□□□□ 0.5
VWA3B-202ENST00000416277 PTPRTO14522 1441 aa18.18■□□□□ 0.5
VWA3B-202ENST00000416277 EXOC6Q8TAG9 804 aa18.17■□□□□ 0.5
VWA3B-202ENST00000416277 SCAPERQ9BY12 1400 aa18.17■□□□□ 0.5
VWA3B-202ENST00000416277 KIAA1210Q9ULL0 1709 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms