RNA–Protein interactions for RNA: ENST00000415585.6

CSTF2-203, Transcript of cleavage stimulation factor subunit 2, humanhuman

TSL 1 (best) BASIC

Gene CSTF2, Length 2,074 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2-203ENST00000415585 ZCCHC11Q5TAX3 1644 aaKnown RBP18.14■□□□□ 0.49
CSTF2-203ENST00000415585 RSPH4AQ5TD94 716 aa18.13■□□□□ 0.49
CSTF2-203ENST00000415585 DCAF11Q8TEB1 546 aa18.13■□□□□ 0.49
CSTF2-203ENST00000415585 TTC37Q6PGP7 1564 aa18.13■□□□□ 0.49
CSTF2-203ENST00000415585 SYCP2Q9BX26 1530 aa18.12■□□□□ 0.49
CSTF2-203ENST00000415585 MAST1Q9Y2H9 1570 aa18.12■□□□□ 0.49
CSTF2-203ENST00000415585 E9PCH4 1651 aa18.11■□□□□ 0.49
CSTF2-203ENST00000415585 UNC13BO14795 1591 aa18.11■□□□□ 0.49
CSTF2-203ENST00000415585 SMG6Q86US8 1419 aaKnown RBP18.11■□□□□ 0.49
CSTF2-203ENST00000415585 ST20-MTHFSA0A0A6YYL1 179 aa18.11■□□□□ 0.49
CSTF2-203ENST00000415585 TRPM1Q7Z4N2 1603 aa18.1■□□□□ 0.49
CSTF2-203ENST00000415585 ARHGAP5Q13017 1502 aa18.09■□□□□ 0.49
CSTF2-203ENST00000415585 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.09■□□□□ 0.49
CSTF2-203ENST00000415585 MYO5CQ9NQX4 1742 aa18.08■□□□□ 0.48
CSTF2-203ENST00000415585 CCDC144AA2RUR9 1427 aa18.07■□□□□ 0.48
CSTF2-203ENST00000415585 PNISRQ8TF01 805 aaKnown RBP18.07■□□□□ 0.48
CSTF2-203ENST00000415585 PRAG1Q86YV5 1406 aa18.07■□□□□ 0.48
CSTF2-203ENST00000415585 PLXNC1O60486 1568 aa18.06■□□□□ 0.48
CSTF2-203ENST00000415585 NUDCQ9Y266 331 aa18.05■□□□□ 0.48
CSTF2-203ENST00000415585 TMC1Q8TDI8 760 aa18.05■□□□□ 0.48
CSTF2-203ENST00000415585 IQGAP3Q86VI3 1631 aa18.05■□□□□ 0.48
CSTF2-203ENST00000415585 PLA2R1Q13018 1463 aa18.04■□□□□ 0.48
CSTF2-203ENST00000415585 B4GALNT3Q6L9W6 998 aa18.04■□□□□ 0.48
CSTF2-203ENST00000415585 KTN1Q86UP2 1357 aaKnown RBP18.03■□□□□ 0.48
CSTF2-203ENST00000415585 PLEKHH2Q8IVE3 1493 aa18.02■□□□□ 0.47
CSTF2-203ENST00000415585 BRD4O60885 1362 aaPredicted RBP18.02■□□□□ 0.47
CSTF2-203ENST00000415585 FANCIQ9NVI1 1328 aa18.02■□□□□ 0.47
CSTF2-203ENST00000415585 A2MP01023 1474 aa18.01■□□□□ 0.47
CSTF2-203ENST00000415585 LRPPRCP42704 1394 aaKnown RBP18.01■□□□□ 0.47
CSTF2-203ENST00000415585 MYBBP1AQ9BQG0 1328 aaKnown RBP18.01■□□□□ 0.47
CSTF2-203ENST00000415585 RALBP1Q15311 655 aa18.01■□□□□ 0.47
CSTF2-203ENST00000415585 RNF123Q5XPI4 1314 aa18■□□□□ 0.47
CSTF2-203ENST00000415585 LAMC1P11047 1609 aa18■□□□□ 0.47
CSTF2-203ENST00000415585 MSH5O43196 834 aa17.99■□□□□ 0.47
CSTF2-203ENST00000415585 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.99■□□□□ 0.47
CSTF2-203ENST00000415585 DUOX2Q9NRD8 1548 aa17.99■□□□□ 0.47
CSTF2-203ENST00000415585 GPRASP1Q5JY77 1395 aa17.99■□□□□ 0.47
CSTF2-203ENST00000415585 RGL3Q3MIN7 710 aa17.99■□□□□ 0.47
CSTF2-203ENST00000415585 PRDM15P57071 1507 aaPredicted RBP17.98■□□□□ 0.47
CSTF2-203ENST00000415585 MAGI2Q86UL8 1455 aa17.97■□□□□ 0.47
CSTF2-203ENST00000415585 NBPF1Q3BBV0 1214 aa17.97■□□□□ 0.47
CSTF2-203ENST00000415585 WDR7Q9Y4E6 1490 aa17.97■□□□□ 0.47
CSTF2-203ENST00000415585 EIF2AK4Q9P2K8 1649 aaKnown RBP17.96■□□□□ 0.47
CSTF2-203ENST00000415585 PLCH2O75038 1416 aa17.96■□□□□ 0.46
CSTF2-203ENST00000415585 ASXL2Q76L83 1435 aa17.96■□□□□ 0.46
CSTF2-203ENST00000415585 SENP3-EIF4A1A0A087X0R7 540 aa17.95■□□□□ 0.46
CSTF2-203ENST00000415585 ATP10AO60312 1499 aa17.95■□□□□ 0.46
CSTF2-203ENST00000415585 ERBINQ96RT1 1412 aa17.95■□□□□ 0.46
CSTF2-203ENST00000415585 PARD3Q8TEW0 1356 aa17.94■□□□□ 0.46
CSTF2-203ENST00000415585 COL17A1Q9UMD9 1497 aaPredicted RBP17.94■□□□□ 0.46
CSTF2-203ENST00000415585 ABCC1P33527 1531 aa17.91■□□□□ 0.46
CSTF2-203ENST00000415585 PER1O15534 1290 aaPredicted RBP17.91■□□□□ 0.46
CSTF2-203ENST00000415585 CYB5RLQ6IPT4 315 aa17.91■□□□□ 0.46
CSTF2-203ENST00000415585 NLRP13Q86W25 1043 aa17.91■□□□□ 0.46
CSTF2-203ENST00000415585 TESK2Q96S53 571 aa17.91■□□□□ 0.46
CSTF2-203ENST00000415585 NPM1P06748 294 aaKnown RBP eCLIP17.9■□□□□ 0.46
CSTF2-203ENST00000415585 DISP3Q9P2K9 1392 aa17.9■□□□□ 0.46
CSTF2-203ENST00000415585 RNF17Q9BXT8 1623 aaKnown RBP17.9■□□□□ 0.46
CSTF2-203ENST00000415585 EFCAB2Q5VUJ9 269 aa17.89■□□□□ 0.45
CSTF2-203ENST00000415585 CCDC136Q96JN2 1154 aa17.86■□□□□ 0.45
CSTF2-203ENST00000415585 TRAPPC8Q9Y2L5 1435 aa17.86■□□□□ 0.45
CSTF2-203ENST00000415585 RIMBP3CA6NJZ7 1639 aa17.86■□□□□ 0.45
CSTF2-203ENST00000415585 RIMBP3BA6NNM3 1639 aa17.86■□□□□ 0.45
CSTF2-203ENST00000415585 RIMBP3Q9UFD9 1639 aa17.86■□□□□ 0.45
CSTF2-203ENST00000415585 WASHC2CQ9Y4E1 1318 aa17.86■□□□□ 0.45
CSTF2-203ENST00000415585 ABCA9Q8IUA7 1624 aa17.85■□□□□ 0.45
CSTF2-203ENST00000415585 MADDQ8WXG6 1647 aa17.83■□□□□ 0.44
CSTF2-203ENST00000415585 TMF1P82094 1093 aa17.83■□□□□ 0.44
CSTF2-203ENST00000415585 PANK3Q9H999 370 aa17.82■□□□□ 0.44
CSTF2-203ENST00000415585 CC2D1BQ5T0F9 858 aaKnown RBP17.81■□□□□ 0.44
CSTF2-203ENST00000415585 AFAP1Q8N556 730 aa17.81■□□□□ 0.44
CSTF2-203ENST00000415585 CEP152O94986 1710 aa17.81■□□□□ 0.44
CSTF2-203ENST00000415585 IQGAP1P46940 1657 aa17.81■□□□□ 0.44
CSTF2-203ENST00000415585 SPHKAPQ2M3C7 1700 aa17.8■□□□□ 0.44
CSTF2-203ENST00000415585 RRP1P56182 461 aaKnown RBP17.8■□□□□ 0.44
CSTF2-203ENST00000415585 TRPM2O94759 1503 aa17.8■□□□□ 0.44
CSTF2-203ENST00000415585 ZFYVE16Q7Z3T8 1539 aa17.8■□□□□ 0.44
CSTF2-203ENST00000415585 ARAP3Q8WWN8 1544 aa17.8■□□□□ 0.44
CSTF2-203ENST00000415585 PDE3BQ13370 1112 aa17.79■□□□□ 0.44
CSTF2-203ENST00000415585 ERICH6Q7L0X2 663 aa17.79■□□□□ 0.44
CSTF2-203ENST00000415585 FANCAO15360 1455 aa17.79■□□□□ 0.44
CSTF2-203ENST00000415585 RTEL1-TNFRSF6BF6WH68 1400 aa17.79■□□□□ 0.44
CSTF2-203ENST00000415585 ZMYM4Q5VZL5 1548 aa17.79■□□□□ 0.44
CSTF2-203ENST00000415585 SALL2Q9Y467 1007 aaPredicted RBP17.79■□□□□ 0.44
CSTF2-203ENST00000415585 INSRP06213 1382 aa17.79■□□□□ 0.44
CSTF2-203ENST00000415585 SPAG9O60271 1321 aaKnown RBP17.79■□□□□ 0.44
CSTF2-203ENST00000415585 DEPDC5O75140 1603 aa17.79■□□□□ 0.44
CSTF2-203ENST00000415585 BLMP54132 1417 aaPredicted RBP17.78■□□□□ 0.44
CSTF2-203ENST00000415585 RCAN3Q9UKA8 241 aa17.78■□□□□ 0.44
CSTF2-203ENST00000415585 CLTCL1P53675 1640 aa17.76■□□□□ 0.43
CSTF2-203ENST00000415585 PTPRTO14522 1441 aa17.75■□□□□ 0.43
CSTF2-203ENST00000415585 TET3O43151 1660 aa17.75■□□□□ 0.43
CSTF2-203ENST00000415585 CD109Q6YHK3 1445 aa17.74■□□□□ 0.43
CSTF2-203ENST00000415585 SCAPERQ9BY12 1400 aa17.73■□□□□ 0.43
CSTF2-203ENST00000415585 CDCA7LQ96GN5 454 aa17.73■□□□□ 0.43
CSTF2-203ENST00000415585 INO80Q9ULG1 1556 aaPredicted RBP17.72■□□□□ 0.43
CSTF2-203ENST00000415585 EXOC6Q8TAG9 804 aa17.72■□□□□ 0.43
CSTF2-203ENST00000415585 ADGRL1O94910 1474 aa17.72■□□□□ 0.43
CSTF2-203ENST00000415585 SCAF11Q99590 1463 aaKnown RBP17.71■□□□□ 0.43
CSTF2-203ENST00000415585 ATP7AQ04656 1500 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms