RNA–Protein interactions for RNA: ENST00000409750.5

RGPD8-203, Transcript of RANBP2-like and GRIP domain containing 8, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RGPD8, Length 5,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD8-203ENST00000409750 C9orf84Q5VXU9 1444 aa16■□□□□ 0.15
RGPD8-203ENST00000409750 EPRSP07814 1512 aaKnown RBP16■□□□□ 0.15
RGPD8-203ENST00000409750 ST20-MTHFSA0A0A6YYL1 179 aa15.99■□□□□ 0.15
RGPD8-203ENST00000409750 LMOD3Q0VAK6 560 aa15.99■□□□□ 0.15
RGPD8-203ENST00000409750 ANP32EQ9BTT0 268 aa15.98■□□□□ 0.15
RGPD8-203ENST00000409750 TRAK1Q9UPV9 953 aa15.98■□□□□ 0.15
RGPD8-203ENST00000409750 PAK3O75914 559 aaPredicted RBP15.98■□□□□ 0.15
RGPD8-203ENST00000409750 CGNL1Q0VF96 1302 aa15.96■□□□□ 0.15
RGPD8-203ENST00000409750 NGDNQ8NEJ9 315 aaKnown RBP15.96■□□□□ 0.15
RGPD8-203ENST00000409750 SOX12O15370 315 aa15.95■□□□□ 0.14
RGPD8-203ENST00000409750 PCF11O94913 1555 aaKnown RBP15.95■□□□□ 0.14
RGPD8-203ENST00000409750 ARXQ96QS3 562 aa15.95■□□□□ 0.14
RGPD8-203ENST00000409750 ROCK1Q13464 1354 aa15.94■□□□□ 0.14
RGPD8-203ENST00000409750 DAPK1P53355 1430 aa15.94■□□□□ 0.14
RGPD8-203ENST00000409750 NUTM2DQ5VT03 806 aaPredicted RBP15.93■□□□□ 0.14
RGPD8-203ENST00000409750 GOLGA6L22H0YM25 854 aa15.93■□□□□ 0.14
RGPD8-203ENST00000409750 RCAN3Q9UKA8 241 aa15.93■□□□□ 0.14
RGPD8-203ENST00000409750 SENP3-EIF4A1A0A087X0R7 540 aa15.92■□□□□ 0.14
RGPD8-203ENST00000409750 OS9Q13438 667 aaPredicted RBP15.92■□□□□ 0.14
RGPD8-203ENST00000409750 PANK3Q9H999 370 aa15.92■□□□□ 0.14
RGPD8-203ENST00000409750 NGEFQ8N5V2 710 aa15.92■□□□□ 0.14
RGPD8-203ENST00000409750 KIF14Q15058 1648 aa15.92■□□□□ 0.14
RGPD8-203ENST00000409750 KIAA1107Q9UPP5 1409 aa15.91■□□□□ 0.14
RGPD8-203ENST00000409750 NCLP19338 710 aaKnown RBP15.91■□□□□ 0.14
RGPD8-203ENST00000409750 GOLGA2Q08379 1002 aa15.91■□□□□ 0.14
RGPD8-203ENST00000409750 CSB-PGBD3P0DP91 1061 aa15.9■□□□□ 0.14
RGPD8-203ENST00000409750 HDAC5Q9UQL6 1122 aa15.9■□□□□ 0.14
RGPD8-203ENST00000409750 CENPJQ9HC77 1338 aaPredicted RBP15.89■□□□□ 0.13
RGPD8-203ENST00000409750 COG3Q96JB2 828 aa15.88■□□□□ 0.13
RGPD8-203ENST00000409750 CDK13Q14004 1512 aaKnown RBP15.88■□□□□ 0.13
RGPD8-203ENST00000409750 THOC2Q8NI27 1593 aaKnown RBP15.87■□□□□ 0.13
RGPD8-203ENST00000409750 AMPHP49418 695 aa15.87■□□□□ 0.13
RGPD8-203ENST00000409750 CCDC141Q6ZP82 1450 aa15.87■□□□□ 0.13
RGPD8-203ENST00000409750 AFAP1Q8N556 730 aa15.87■□□□□ 0.13
RGPD8-203ENST00000409750 PRKRIP1Q9H875 184 aaPredicted RBP15.86■□□□□ 0.13
RGPD8-203ENST00000409750 NPHP1O15259 732 aa15.85■□□□□ 0.13
RGPD8-203ENST00000409750 STK31Q9BXU1 1019 aa15.85■□□□□ 0.13
RGPD8-203ENST00000409750 RGS3P49796 1198 aa15.85■□□□□ 0.13
RGPD8-203ENST00000409750 RWDD1Q9H446 243 aaPredicted RBP15.85■□□□□ 0.13
RGPD8-203ENST00000409750 CCDC7Q96M83 1385 aa15.84■□□□□ 0.13
RGPD8-203ENST00000409750 PMFBP1Q8TBY8 1022 aa15.83■□□□□ 0.13
RGPD8-203ENST00000409750 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.83■□□□□ 0.12
RGPD8-203ENST00000409750 DNAJC5BQ9UF47 199 aa15.83■□□□□ 0.12
RGPD8-203ENST00000409750 SCAPERQ9BY12 1400 aa15.82■□□□□ 0.12
RGPD8-203ENST00000409750 CNTLNQ9NXG0 1405 aa15.82■□□□□ 0.12
RGPD8-203ENST00000409750 PTPN23Q9H3S7 1636 aa15.82■□□□□ 0.12
RGPD8-203ENST00000409750 CAMSAP2Q08AD1 1489 aa15.81■□□□□ 0.12
RGPD8-203ENST00000409750 POGZQ7Z3K3 1410 aa15.81■□□□□ 0.12
RGPD8-203ENST00000409750 RPGRIP1LQ68CZ1 1315 aa15.81■□□□□ 0.12
RGPD8-203ENST00000409750 MINK1Q8N4C8 1332 aaPredicted RBP15.81■□□□□ 0.12
RGPD8-203ENST00000409750 MCCP23508 829 aa15.81■□□□□ 0.12
RGPD8-203ENST00000409750 B4GALNT3Q6L9W6 998 aa15.81■□□□□ 0.12
RGPD8-203ENST00000409750 SLC52A1Q9NWF4 448 aa15.8■□□□□ 0.12
RGPD8-203ENST00000409750 ZNF608Q9ULD9 1512 aaPredicted RBP15.79■□□□□ 0.12
RGPD8-203ENST00000409750 SMC4Q9NTJ3 1288 aa15.78■□□□□ 0.12
RGPD8-203ENST00000409750 ZBED9Q6R2W3 1325 aa15.78■□□□□ 0.12
RGPD8-203ENST00000409750 PLB1Q6P1J6 1458 aa15.78■□□□□ 0.12
RGPD8-203ENST00000409750 E9PSI1 815 aa15.78■□□□□ 0.12
RGPD8-203ENST00000409750 ITPRIPQ8IWB1 547 aa15.78■□□□□ 0.12
RGPD8-203ENST00000409750 ARHGEF11O15085 1522 aa15.77■□□□□ 0.12
RGPD8-203ENST00000409750 KIF7Q2M1P5 1343 aa15.77■□□□□ 0.12
RGPD8-203ENST00000409750 HMMRO75330 724 aa15.77■□□□□ 0.11
RGPD8-203ENST00000409750 NBR1Q14596 966 aa15.77■□□□□ 0.11
RGPD8-203ENST00000409750 WASHC2AQ641Q2 1341 aa15.76■□□□□ 0.11
RGPD8-203ENST00000409750 NAIPQ13075 1403 aa15.75■□□□□ 0.11
RGPD8-203ENST00000409750 CCDC146Q8IYE0 955 aa15.75■□□□□ 0.11
RGPD8-203ENST00000409750 ANKRD30BQ9BXX2 1392 aa15.75■□□□□ 0.11
RGPD8-203ENST00000409750 TCERG1O14776 1098 aaKnown RBP15.75■□□□□ 0.11
RGPD8-203ENST00000409750 CD109Q6YHK3 1445 aa15.74■□□□□ 0.11
RGPD8-203ENST00000409750 KCNJ4P48050 445 aa15.74■□□□□ 0.11
RGPD8-203ENST00000409750 AKNAQ7Z591 1439 aa15.74■□□□□ 0.11
RGPD8-203ENST00000409750 DIAPH1O60610 1272 aaKnown RBP15.73■□□□□ 0.11
RGPD8-203ENST00000409750 CTTNBP2Q8WZ74 1663 aa15.73■□□□□ 0.11
RGPD8-203ENST00000409750 HSP90AB1P08238 724 aaKnown RBP15.73■□□□□ 0.11
RGPD8-203ENST00000409750 HSCBQ8IWL3 235 aa15.72■□□□□ 0.11
RGPD8-203ENST00000409750 RAPGEF6Q8TEU7 1601 aa15.72■□□□□ 0.11
RGPD8-203ENST00000409750 ADGRL1O94910 1474 aa15.71■□□□□ 0.11
RGPD8-203ENST00000409750 BRD4O60885 1362 aaPredicted RBP15.71■□□□□ 0.11
RGPD8-203ENST00000409750 ABCC5O15440 1437 aa15.71■□□□□ 0.11
RGPD8-203ENST00000409750 ADAMTS12P58397 1594 aa15.71■□□□□ 0.11
RGPD8-203ENST00000409750 ZRSR1Q15695 479 aaKnown RBP15.7■□□□□ 0.1
RGPD8-203ENST00000409750 C1orf141Q5JVX7 400 aa15.7■□□□□ 0.1
RGPD8-203ENST00000409750 NUTM2FA1L443 756 aa15.7■□□□□ 0.1
RGPD8-203ENST00000409750 GPATCH3Q96I76 525 aa15.7■□□□□ 0.1
RGPD8-203ENST00000409750 THEMISQ8N1K5 641 aaPredicted RBP15.7■□□□□ 0.1
RGPD8-203ENST00000409750 FGD1P98174 961 aa15.7■□□□□ 0.1
RGPD8-203ENST00000409750 WDR97A6NE52 1622 aa15.68■□□□□ 0.1
RGPD8-203ENST00000409750 PSME1Q06323 249 aa15.68■□□□□ 0.1
RGPD8-203ENST00000409750 NOP58Q9Y2X3 529 aaKnown RBP15.68■□□□□ 0.1
RGPD8-203ENST00000409750 ERBINQ96RT1 1412 aa15.68■□□□□ 0.1
RGPD8-203ENST00000409750 UGGT2Q9NYU1 1516 aa15.67■□□□□ 0.1
RGPD8-203ENST00000409750 RUNDC1Q96C34 613 aa15.67■□□□□ 0.1
RGPD8-203ENST00000409750 ITSN2Q9NZM3 1697 aa15.67■□□□□ 0.1
RGPD8-203ENST00000409750 KIAA1211Q6ZU35 1233 aa15.66■□□□□ 0.1
RGPD8-203ENST00000409750 LTV1Q96GA3 475 aaPredicted RBP15.66■□□□□ 0.1
RGPD8-203ENST00000409750 CCDC9Q9Y3X0 531 aaKnown RBP15.66■□□□□ 0.1
RGPD8-203ENST00000409750 ATF3P18847 181 aa15.66■□□□□ 0.1
RGPD8-203ENST00000409750 PPP6R1Q9UPN7 881 aa15.66■□□□□ 0.1
RGPD8-203ENST00000409750 CFAP70Q5T0N1 1121 aa15.65■□□□□ 0.1
RGPD8-203ENST00000409750 TXNDC2Q86VQ3 553 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms