RNA–Protein interactions for RNA: ENST00000404025.2

NLRC4-204, Transcript of NLR family CARD domain containing 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NLRC4, Length 3,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC4-204ENST00000404025 FAM135AQ9P2D6 1515 aa10.23□□□□□ -0.77
NLRC4-204ENST00000404025 ARHGEF5Q12774 1597 aa10.23□□□□□ -0.77
NLRC4-204ENST00000404025 PLEKHH2Q8IVE3 1493 aa10.23□□□□□ -0.77
NLRC4-204ENST00000404025 BCORL1Q5H9F3 1711 aa10.23□□□□□ -0.77
NLRC4-204ENST00000404025 CHD1O14646 1710 aa10.23□□□□□ -0.77
NLRC4-204ENST00000404025 ERCC6L2Q5T890 1561 aa10.22□□□□□ -0.77
NLRC4-204ENST00000404025 KDM5CP41229 1560 aa10.21□□□□□ -0.77
NLRC4-204ENST00000404025 PNISRQ8TF01 805 aaKnown RBP10.21□□□□□ -0.77
NLRC4-204ENST00000404025 ERICH6BQ5W0A0 696 aa10.21□□□□□ -0.78
NLRC4-204ENST00000404025 AFAP1Q8N556 730 aa10.21□□□□□ -0.78
NLRC4-204ENST00000404025 CDC42BPBQ9Y5S2 1711 aa10.21□□□□□ -0.78
NLRC4-204ENST00000404025 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.21□□□□□ -0.78
NLRC4-204ENST00000404025 ARHGEF12Q9NZN5 1544 aa10.21□□□□□ -0.78
NLRC4-204ENST00000404025 KDM5DQ9BY66 1539 aa10.2□□□□□ -0.78
NLRC4-204ENST00000404025 TTC37Q6PGP7 1564 aa10.2□□□□□ -0.78
NLRC4-204ENST00000404025 PREX2Q70Z35 1606 aa10.2□□□□□ -0.78
NLRC4-204ENST00000404025 RALBP1Q15311 655 aa10.2□□□□□ -0.78
NLRC4-204ENST00000404025 CC2D1BQ5T0F9 858 aaKnown RBP10.2□□□□□ -0.78
NLRC4-204ENST00000404025 NUDCQ9Y266 331 aa10.2□□□□□ -0.78
NLRC4-204ENST00000404025 SPAG9O60271 1321 aaKnown RBP10.2□□□□□ -0.78
NLRC4-204ENST00000404025 BCL11AQ9H165 835 aa10.19□□□□□ -0.78
NLRC4-204ENST00000404025 MYBBP1AQ9BQG0 1328 aaKnown RBP10.19□□□□□ -0.78
NLRC4-204ENST00000404025 ABCC2Q92887 1545 aa10.19□□□□□ -0.78
NLRC4-204ENST00000404025 PRAG1Q86YV5 1406 aa10.18□□□□□ -0.78
NLRC4-204ENST00000404025 KTN1Q86UP2 1357 aaKnown RBP10.17□□□□□ -0.78
NLRC4-204ENST00000404025 PLCH2O75038 1416 aa10.17□□□□□ -0.78
NLRC4-204ENST00000404025 TMF1P82094 1093 aa10.17□□□□□ -0.78
NLRC4-204ENST00000404025 ANP32EQ9BTT0 268 aa10.17□□□□□ -0.78
NLRC4-204ENST00000404025 POLR1AO95602 1720 aaPredicted RBP10.16□□□□□ -0.78
NLRC4-204ENST00000404025 PLA2R1Q13018 1463 aa10.16□□□□□ -0.78
NLRC4-204ENST00000404025 PANK3Q9H999 370 aa10.16□□□□□ -0.78
NLRC4-204ENST00000404025 TRAPPC8Q9Y2L5 1435 aa10.16□□□□□ -0.78
NLRC4-204ENST00000404025 NLRP13Q86W25 1043 aa10.16□□□□□ -0.78
NLRC4-204ENST00000404025 CCDC136Q96JN2 1154 aa10.15□□□□□ -0.78
NLRC4-204ENST00000404025 BRD4O60885 1362 aaPredicted RBP10.15□□□□□ -0.78
NLRC4-204ENST00000404025 A2MP01023 1474 aa10.15□□□□□ -0.78
NLRC4-204ENST00000404025 SMG6Q86US8 1419 aaKnown RBP10.15□□□□□ -0.79
NLRC4-204ENST00000404025 KIF3BO15066 747 aa10.15□□□□□ -0.79
NLRC4-204ENST00000404025 DUOX2Q9NRD8 1548 aa10.14□□□□□ -0.79
NLRC4-204ENST00000404025 MYO5CQ9NQX4 1742 aa10.13□□□□□ -0.79
NLRC4-204ENST00000404025 DISP3Q9P2K9 1392 aa10.13□□□□□ -0.79
NLRC4-204ENST00000404025 TESK2Q96S53 571 aa10.13□□□□□ -0.79
NLRC4-204ENST00000404025 SHROOM2Q13796 1616 aa10.13□□□□□ -0.79
NLRC4-204ENST00000404025 ERBINQ96RT1 1412 aa10.12□□□□□ -0.79
NLRC4-204ENST00000404025 MAST1Q9Y2H9 1570 aa10.11□□□□□ -0.79
NLRC4-204ENST00000404025 PER1O15534 1290 aaPredicted RBP10.11□□□□□ -0.79
NLRC4-204ENST00000404025 CHGAP10645 457 aaKnown RBP10.11□□□□□ -0.79
NLRC4-204ENST00000404025 KNSTRNQ9Y448 316 aa10.11□□□□□ -0.79
NLRC4-204ENST00000404025 KANK1Q14678 1352 aa10.1□□□□□ -0.79
NLRC4-204ENST00000404025 GPRASP1Q5JY77 1395 aa10.1□□□□□ -0.79
NLRC4-204ENST00000404025 UNC13BO14795 1591 aa10.1□□□□□ -0.79
NLRC4-204ENST00000404025 ZCCHC11Q5TAX3 1644 aaKnown RBP10.1□□□□□ -0.79
NLRC4-204ENST00000404025 NPM1P06748 294 aaKnown RBP eCLIP10.09□□□□□ -0.79
NLRC4-204ENST00000404025 SCAPERQ9BY12 1400 aa10.09□□□□□ -0.79
NLRC4-204ENST00000404025 PLXNC1O60486 1568 aa10.09□□□□□ -0.79
NLRC4-204ENST00000404025 TRPM1Q7Z4N2 1603 aa10.09□□□□□ -0.79
NLRC4-204ENST00000404025 LRPPRCP42704 1394 aaKnown RBP10.08□□□□□ -0.8
NLRC4-204ENST00000404025 RCAN3Q9UKA8 241 aa10.08□□□□□ -0.8
NLRC4-204ENST00000404025 PARD3Q8TEW0 1356 aa10.08□□□□□ -0.8
NLRC4-204ENST00000404025 IQGAP3Q86VI3 1631 aa10.08□□□□□ -0.8
NLRC4-204ENST00000404025 CDCA7LQ96GN5 454 aa10.08□□□□□ -0.8
NLRC4-204ENST00000404025 ABCC1P33527 1531 aa10.07□□□□□ -0.8
NLRC4-204ENST00000404025 UHRF1BP1LA0JNW5 1464 aa10.07□□□□□ -0.8
NLRC4-204ENST00000404025 COL17A1Q9UMD9 1497 aaPredicted RBP10.07□□□□□ -0.8
NLRC4-204ENST00000404025 CDCA8Q53HL2 280 aa10.07□□□□□ -0.8
NLRC4-204ENST00000404025 MSH5O43196 834 aa10.06□□□□□ -0.8
NLRC4-204ENST00000404025 WASHC2CQ9Y4E1 1318 aa10.06□□□□□ -0.8
NLRC4-204ENST00000404025 WDR43Q15061 677 aaKnown RBP eCLIP10.06□□□□□ -0.8
NLRC4-204ENST00000404025 FANCAO15360 1455 aa10.06□□□□□ -0.8
NLRC4-204ENST00000404025 RRP1P56182 461 aaKnown RBP10.06□□□□□ -0.8
NLRC4-204ENST00000404025 CFAP70Q5T0N1 1121 aa10.05□□□□□ -0.8
NLRC4-204ENST00000404025 EXOC6Q8TAG9 804 aa10.05□□□□□ -0.8
NLRC4-204ENST00000404025 CLASP1Q7Z460 1538 aa10.05□□□□□ -0.8
NLRC4-204ENST00000404025 FANCIQ9NVI1 1328 aa10.05□□□□□ -0.8
NLRC4-204ENST00000404025 ATP10AO60312 1499 aa10.05□□□□□ -0.8
NLRC4-204ENST00000404025 PDE3BQ13370 1112 aa10.05□□□□□ -0.8
NLRC4-204ENST00000404025 GGT6Q6P531 493 aa10.05□□□□□ -0.8
NLRC4-204ENST00000404025 RNF123Q5XPI4 1314 aa10.05□□□□□ -0.8
NLRC4-204ENST00000404025 WDR7Q9Y4E6 1490 aa10.04□□□□□ -0.8
NLRC4-204ENST00000404025 RTEL1-TNFRSF6BF6WH68 1400 aa10.04□□□□□ -0.8
NLRC4-204ENST00000404025 PRDM15P57071 1507 aaPredicted RBP10.04□□□□□ -0.8
NLRC4-204ENST00000404025 ADGRL1O94910 1474 aa10.04□□□□□ -0.8
NLRC4-204ENST00000404025 EIF2AK4Q9P2K8 1649 aaKnown RBP10.04□□□□□ -0.8
NLRC4-204ENST00000404025 ADAMTS8Q9UP79 889 aa10.04□□□□□ -0.8
NLRC4-204ENST00000404025 MAGI2Q86UL8 1455 aa10.03□□□□□ -0.8
NLRC4-204ENST00000404025 PLIN1O60240 522 aa10.03□□□□□ -0.8
NLRC4-204ENST00000404025 PPP2R1AP30153 589 aa10.03□□□□□ -0.8
NLRC4-204ENST00000404025 STAC3Q96MF2 364 aa10.02□□□□□ -0.81
NLRC4-204ENST00000404025 DAXXQ9UER7 740 aaPredicted RBP10.02□□□□□ -0.81
NLRC4-204ENST00000404025 SENP3Q9H4L4 574 aaPredicted RBP10.01□□□□□ -0.81
NLRC4-204ENST00000404025 ADGRF5Q8IZF2 1346 aa10.01□□□□□ -0.81
NLRC4-204ENST00000404025 EIF3AQ14152 1382 aaKnown RBP10.01□□□□□ -0.81
NLRC4-204ENST00000404025 ZFYVE16Q7Z3T8 1539 aa10.01□□□□□ -0.81
NLRC4-204ENST00000404025 ASXL2Q76L83 1435 aa10.01□□□□□ -0.81
NLRC4-204ENST00000404025 SCAF11Q99590 1463 aaKnown RBP10□□□□□ -0.81
NLRC4-204ENST00000404025 E9PCH4 1651 aa10□□□□□ -0.81
NLRC4-204ENST00000404025 ATP7AQ04656 1500 aa10□□□□□ -0.81
NLRC4-204ENST00000404025 AMER1Q5JTC6 1135 aaPredicted RBP9.99□□□□□ -0.81
NLRC4-204ENST00000404025 CCDC146Q8IYE0 955 aa9.99□□□□□ -0.81
NLRC4-204ENST00000404025 OSCARQ8IYS5 282 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms