RNA–Protein interactions for RNA: ENST00000403946.7

OTOF-205, Transcript of otoferlin, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene OTOF, Length 6,937 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTOF-205ENST00000403946 KIAA2012Q0VF49 1180 aa13.81□□□□□ -0.2
OTOF-205ENST00000403946 CCDC18Q5T9S5 1454 aa13.8□□□□□ -0.2
OTOF-205ENST00000403946 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.8□□□□□ -0.2
OTOF-205ENST00000403946 ESCO1Q5FWF5 840 aa13.8□□□□□ -0.2
OTOF-205ENST00000403946 TXNDC2Q86VQ3 553 aa13.8□□□□□ -0.2
OTOF-205ENST00000403946 TTC5Q8N0Z6 440 aa13.79□□□□□ -0.2
OTOF-205ENST00000403946 STK31Q9BXU1 1019 aa13.79□□□□□ -0.2
OTOF-205ENST00000403946 EIF3AQ14152 1382 aaKnown RBP13.79□□□□□ -0.2
OTOF-205ENST00000403946 RAPGEF2Q9Y4G8 1499 aa13.79□□□□□ -0.2
OTOF-205ENST00000403946 GOLGA6L3A6NEY3 463 aa13.78□□□□□ -0.2
OTOF-205ENST00000403946 RAD54L2Q9Y4B4 1467 aa13.78□□□□□ -0.2
OTOF-205ENST00000403946 WIZO95785 1651 aa13.78□□□□□ -0.2
OTOF-205ENST00000403946 COG3Q96JB2 828 aa13.78□□□□□ -0.2
OTOF-205ENST00000403946 RAD21O60216 631 aa13.78□□□□□ -0.2
OTOF-205ENST00000403946 KANK4Q5T7N3 995 aaPredicted RBP13.78□□□□□ -0.2
OTOF-205ENST00000403946 MPHOSPH9Q99550 1183 aa13.78□□□□□ -0.2
OTOF-205ENST00000403946 GAPVD1Q14C86 1478 aa13.77□□□□□ -0.21
OTOF-205ENST00000403946 PKNOX2Q96KN3 472 aa13.77□□□□□ -0.21
OTOF-205ENST00000403946 NLRP2Q9NX02 1062 aa13.77□□□□□ -0.21
OTOF-205ENST00000403946 CHMP4BQ9H444 224 aaKnown RBP13.76□□□□□ -0.21
OTOF-205ENST00000403946 CALRP27797 417 aaKnown RBP13.76□□□□□ -0.21
OTOF-205ENST00000403946 SLC4A10Q6U841 1118 aa13.76□□□□□ -0.21
OTOF-205ENST00000403946 TRIM34Q9BYJ4 488 aa13.75□□□□□ -0.21
OTOF-205ENST00000403946 VPS53Q5VIR6 699 aa13.74□□□□□ -0.21
OTOF-205ENST00000403946 SPRYD3Q8NCJ5 442 aa13.74□□□□□ -0.21
OTOF-205ENST00000403946 GZF1Q9H116 711 aaPredicted RBP13.74□□□□□ -0.21
OTOF-205ENST00000403946 CTDP1Q9Y5B0 961 aaPredicted RBP13.73□□□□□ -0.21
OTOF-205ENST00000403946 GBP4Q96PP9 640 aa13.73□□□□□ -0.21
OTOF-205ENST00000403946 SETQ01105 290 aaPredicted RBP13.73□□□□□ -0.21
OTOF-205ENST00000403946 PODXL2Q9NZ53 605 aa13.73□□□□□ -0.21
OTOF-205ENST00000403946 TEFQ10587 303 aa13.72□□□□□ -0.21
OTOF-205ENST00000403946 A0A0U1RQG5 324 aaPredicted RBP13.72□□□□□ -0.21
OTOF-205ENST00000403946 GNL2Q13823 731 aaKnown RBP13.72□□□□□ -0.21
OTOF-205ENST00000403946 PRKCSHP14314 528 aaPredicted RBP13.72□□□□□ -0.21
OTOF-205ENST00000403946 IPO9Q96P70 1041 aaKnown RBP13.72□□□□□ -0.21
OTOF-205ENST00000403946 TOMM22Q9NS69 142 aa13.72□□□□□ -0.21
OTOF-205ENST00000403946 CALD1Q05682 793 aaKnown RBP13.71□□□□□ -0.21
OTOF-205ENST00000403946 THEMISQ8N1K5 641 aaPredicted RBP13.71□□□□□ -0.21
OTOF-205ENST00000403946 MS4A1P11836 297 aa13.71□□□□□ -0.22
OTOF-205ENST00000403946 SAMD1Q6SPF0 538 aaPredicted RBP13.71□□□□□ -0.22
OTOF-205ENST00000403946 PRG4Q92954 1404 aaPredicted RBP13.71□□□□□ -0.22
OTOF-205ENST00000403946 GOLGA6L4A6NEF3 574 aa13.7□□□□□ -0.22
OTOF-205ENST00000403946 ANKLE2Q86XL3 938 aa13.7□□□□□ -0.22
OTOF-205ENST00000403946 GOLGA6L1Q8N7Z2 621 aa13.7□□□□□ -0.22
OTOF-205ENST00000403946 RAPGEF4Q8WZA2 1011 aa13.7□□□□□ -0.22
OTOF-205ENST00000403946 TOP2AP11388 1531 aaKnown RBP13.7□□□□□ -0.22
OTOF-205ENST00000403946 PRDM2Q13029 1718 aa13.7□□□□□ -0.22
OTOF-205ENST00000403946 KRI1Q8N9T8 703 aaKnown RBP13.7□□□□□ -0.22
OTOF-205ENST00000403946 TIMELESSQ9UNS1 1208 aa13.7□□□□□ -0.22
OTOF-205ENST00000403946 NESP48681 1621 aa13.69□□□□□ -0.22
OTOF-205ENST00000403946 RAPGEF3O95398 923 aa13.69□□□□□ -0.22
OTOF-205ENST00000403946 EIF2S2P20042 333 aaKnown RBP13.69□□□□□ -0.22
OTOF-205ENST00000403946 CHMP4AQ9BY43 222 aa13.68□□□□□ -0.22
OTOF-205ENST00000403946 FAM177BA6PVY3 158 aa13.68□□□□□ -0.22
OTOF-205ENST00000403946 AFAP1Q8N556 730 aa13.68□□□□□ -0.22
OTOF-205ENST00000403946 RBM33Q96EV2 1170 aaKnown RBP13.68□□□□□ -0.22
OTOF-205ENST00000403946 PDE3BQ13370 1112 aa13.67□□□□□ -0.22
OTOF-205ENST00000403946 ZNF771Q7L3S4 317 aaPredicted RBP13.67□□□□□ -0.22
OTOF-205ENST00000403946 VPS37DQ86XT2 251 aa13.67□□□□□ -0.22
OTOF-205ENST00000403946 FGD5Q6ZNL6 1462 aa13.66□□□□□ -0.22
OTOF-205ENST00000403946 CC2D2AQ9P2K1 1620 aa13.66□□□□□ -0.22
OTOF-205ENST00000403946 POGZQ7Z3K3 1410 aa13.66□□□□□ -0.22
OTOF-205ENST00000403946 EVC2Q86UK5 1308 aa13.66□□□□□ -0.22
OTOF-205ENST00000403946 NECTIN2Q92692 538 aa13.66□□□□□ -0.22
OTOF-205ENST00000403946 NOL10Q9BSC4 688 aaKnown RBP13.66□□□□□ -0.22
OTOF-205ENST00000403946 ADAMTS2O95450 1211 aa13.66□□□□□ -0.22
OTOF-205ENST00000403946 HSPA5P11021 654 aaKnown RBP13.66□□□□□ -0.22
OTOF-205ENST00000403946 RBM42Q9BTD8 480 aaKnown RBP13.66□□□□□ -0.22
OTOF-205ENST00000403946 MRC2Q9UBG0 1479 aa13.65□□□□□ -0.22
OTOF-205ENST00000403946 GPRASP1Q5JY77 1395 aa13.65□□□□□ -0.22
OTOF-205ENST00000403946 SMARCA4P51532 1647 aa13.65□□□□□ -0.22
OTOF-205ENST00000403946 PMFBP1Q8TBY8 1022 aa13.65□□□□□ -0.22
OTOF-205ENST00000403946 KTN1Q86UP2 1357 aaKnown RBP13.64□□□□□ -0.23
OTOF-205ENST00000403946 PRM3Q9NNZ6 103 aa13.64□□□□□ -0.23
OTOF-205ENST00000403946 SETD5Q9C0A6 1442 aa13.64□□□□□ -0.23
OTOF-205ENST00000403946 CCDC146Q8IYE0 955 aa13.64□□□□□ -0.23
OTOF-205ENST00000403946 ABTB2Q8N961 1025 aa13.64□□□□□ -0.23
OTOF-205ENST00000403946 CCDC144AA2RUR9 1427 aa13.64□□□□□ -0.23
OTOF-205ENST00000403946 XPCQ01831 940 aaPredicted RBP13.64□□□□□ -0.23
OTOF-205ENST00000403946 NLRP6P59044 892 aa13.63□□□□□ -0.23
OTOF-205ENST00000403946 UACAQ9BZF9 1416 aa13.63□□□□□ -0.23
OTOF-205ENST00000403946 ITPRIPQ8IWB1 547 aa13.63□□□□□ -0.23
OTOF-205ENST00000403946 TCERG1O14776 1098 aaKnown RBP13.62□□□□□ -0.23
OTOF-205ENST00000403946 KIAA1211Q6ZU35 1233 aa13.62□□□□□ -0.23
OTOF-205ENST00000403946 NOC3LQ8WTT2 800 aaKnown RBP13.62□□□□□ -0.23
OTOF-205ENST00000403946 SLC26A8Q96RN1 970 aa13.62□□□□□ -0.23
OTOF-205ENST00000403946 SYAP1Q96A49 352 aaPredicted RBP13.62□□□□□ -0.23
OTOF-205ENST00000403946 TOM1L2Q6ZVM7 507 aa13.62□□□□□ -0.23
OTOF-205ENST00000403946 SLKQ9H2G2 1235 aaPredicted RBP13.62□□□□□ -0.23
OTOF-205ENST00000403946 IPO8O15397 1037 aaKnown RBP13.62□□□□□ -0.23
OTOF-205ENST00000403946 ELL2O00472 640 aaPredicted RBP13.61□□□□□ -0.23
OTOF-205ENST00000403946 APPP05067 770 aa13.61□□□□□ -0.23
OTOF-205ENST00000403946 DDX54Q8TDD1 881 aaKnown RBP13.61□□□□□ -0.23
OTOF-205ENST00000403946 GSE1Q14687 1217 aa13.61□□□□□ -0.23
OTOF-205ENST00000403946 PAXIP1Q6ZW49 1069 aaPredicted RBP13.61□□□□□ -0.23
OTOF-205ENST00000403946 UBAP1LF5GYI3 381 aa13.61□□□□□ -0.23
OTOF-205ENST00000403946 ARHGAP5Q13017 1502 aa13.6□□□□□ -0.23
OTOF-205ENST00000403946 MARCH6O60337 910 aa13.6□□□□□ -0.23
OTOF-205ENST00000403946 LMOD3Q0VAK6 560 aa13.6□□□□□ -0.23
OTOF-205ENST00000403946 GPATCH3Q96I76 525 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms