RNA–Protein interactions for RNA: ENST00000399788.6

KDM5A-201, Transcript of lysine demethylase 5A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDM5A, Length 10,763 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5A-201ENST00000399788 TTC5Q8N0Z6 440 aa10.28□□□□□ -0.76
KDM5A-201ENST00000399788 SMC4Q9NTJ3 1288 aa10.28□□□□□ -0.76
KDM5A-201ENST00000399788 SF3B2Q13435 895 aaKnown RBP10.28□□□□□ -0.76
KDM5A-201ENST00000399788 KTN1Q86UP2 1357 aaKnown RBP10.28□□□□□ -0.76
KDM5A-201ENST00000399788 LRRFIP1Q32MZ4 808 aaKnown RBP10.27□□□□□ -0.76
KDM5A-201ENST00000399788 KIF16BQ96L93 1317 aa10.27□□□□□ -0.76
KDM5A-201ENST00000399788 R3HCC1Q9Y3T6 440 aaKnown RBP10.27□□□□□ -0.77
KDM5A-201ENST00000399788 EIF3AQ14152 1382 aaKnown RBP10.26□□□□□ -0.77
KDM5A-201ENST00000399788 PKD2Q13563 968 aa10.26□□□□□ -0.77
KDM5A-201ENST00000399788 RTN4Q9NQC3 1192 aaKnown RBP10.26□□□□□ -0.77
KDM5A-201ENST00000399788 RBM33Q96EV2 1170 aaKnown RBP10.26□□□□□ -0.77
KDM5A-201ENST00000399788 NOL8Q76FK4 1167 aaKnown RBP10.26□□□□□ -0.77
KDM5A-201ENST00000399788 PPP1R1BQ9UD71 204 aaPredicted RBP10.26□□□□□ -0.77
KDM5A-201ENST00000399788 TEFQ10587 303 aa10.26□□□□□ -0.77
KDM5A-201ENST00000399788 H3BQV1 296 aa10.26□□□□□ -0.77
KDM5A-201ENST00000399788 IFFO2Q5TF58 517 aa10.26□□□□□ -0.77
KDM5A-201ENST00000399788 ROCK2O75116 1388 aaKnown RBP10.26□□□□□ -0.77
KDM5A-201ENST00000399788 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.26□□□□□ -0.773e-23■■■■■ 559
KDM5A-201ENST00000399788 NOP58Q9Y2X3 529 aaKnown RBP10.25□□□□□ -0.77
KDM5A-201ENST00000399788 FHAD1B1AJZ9 1412 aa10.25□□□□□ -0.77
KDM5A-201ENST00000399788 EEA1Q15075 1411 aa10.25□□□□□ -0.77
KDM5A-201ENST00000399788 NEXNQ0ZGT2 675 aa10.25□□□□□ -0.77
KDM5A-201ENST00000399788 FOXD1Q16676 465 aa10.25□□□□□ -0.77
KDM5A-201ENST00000399788 FAM184AQ8NB25 1140 aa10.25□□□□□ -0.77
KDM5A-201ENST00000399788 CHMP4CQ96CF2 233 aa10.24□□□□□ -0.77
KDM5A-201ENST00000399788 APPP05067 770 aa10.24□□□□□ -0.77
KDM5A-201ENST00000399788 CPLX2Q6PUV4 134 aaKnown RBP10.24□□□□□ -0.77
KDM5A-201ENST00000399788 WRNQ14191 1432 aaPredicted RBP eCLIP10.24□□□□□ -0.77
KDM5A-201ENST00000399788 PAF1Q8N7H5 531 aa10.24□□□□□ -0.77
KDM5A-201ENST00000399788 PSME1Q06323 249 aa10.23□□□□□ -0.77
KDM5A-201ENST00000399788 CCDC47Q96A33 483 aaKnown RBP10.23□□□□□ -0.77
KDM5A-201ENST00000399788 TPM1P09493 284 aa10.23□□□□□ -0.77
KDM5A-201ENST00000399788 PMFBP1Q8TBY8 1022 aa10.23□□□□□ -0.77
KDM5A-201ENST00000399788 WASHC2AQ641Q2 1341 aa10.23□□□□□ -0.77
KDM5A-201ENST00000399788 PCMTD1Q96MG8 357 aaPredicted RBP10.22□□□□□ -0.77
KDM5A-201ENST00000399788 CEP162Q5TB80 1403 aa10.22□□□□□ -0.77
KDM5A-201ENST00000399788 TRIM29Q14134 588 aa10.22□□□□□ -0.77
KDM5A-201ENST00000399788 WWC2Q6AWC2 1192 aa10.22□□□□□ -0.77
KDM5A-201ENST00000399788 ATF3P18847 181 aa10.21□□□□□ -0.77
KDM5A-201ENST00000399788 GZF1Q9H116 711 aaPredicted RBP10.21□□□□□ -0.77
KDM5A-201ENST00000399788 CYB5RLQ6IPT4 315 aa10.21□□□□□ -0.77
KDM5A-201ENST00000399788 TNNT3P45378 269 aaPredicted RBP10.21□□□□□ -0.78
KDM5A-201ENST00000399788 MFAP1P55081 439 aaKnown RBP10.21□□□□□ -0.78
KDM5A-201ENST00000399788 DCAF1Q9Y4B6 1507 aa10.2□□□□□ -0.78
KDM5A-201ENST00000399788 ODF2Q5BJF6 829 aa10.2□□□□□ -0.78
KDM5A-201ENST00000399788 RILPL2Q969X0 211 aa10.2□□□□□ -0.78
KDM5A-201ENST00000399788 C9orf78Q9NZ63 289 aaPredicted RBP10.2□□□□□ -0.78
KDM5A-201ENST00000399788 NUP155O75694 1391 aa10.2□□□□□ -0.78
KDM5A-201ENST00000399788 COG3Q96JB2 828 aa10.2□□□□□ -0.78
KDM5A-201ENST00000399788 TCERG1O14776 1098 aaKnown RBP10.2□□□□□ -0.78
KDM5A-201ENST00000399788 CCDC70Q6NSX1 233 aa10.19□□□□□ -0.78
KDM5A-201ENST00000399788 ST18O60284 1047 aa10.19□□□□□ -0.78
KDM5A-201ENST00000399788 PHF14O94880 888 aa10.19□□□□□ -0.78
KDM5A-201ENST00000399788 EIF2S2P20042 333 aaKnown RBP10.19□□□□□ -0.78
KDM5A-201ENST00000399788 MCTP1Q6DN14 999 aa10.19□□□□□ -0.78
KDM5A-201ENST00000399788 TRAK1Q9UPV9 953 aa10.18□□□□□ -0.78
KDM5A-201ENST00000399788 ERICH2A1L162 156 aa10.18□□□□□ -0.78
KDM5A-201ENST00000399788 TRDNQ13061 729 aa10.18□□□□□ -0.78
KDM5A-201ENST00000399788 CT47A1Q5JQC4 288 aaPredicted RBP10.18□□□□□ -0.78
KDM5A-201ENST00000399788 CEP164Q9UPV0 1460 aa10.18□□□□□ -0.78
KDM5A-201ENST00000399788 IKQ13123 557 aaPredicted RBP10.18□□□□□ -0.78
KDM5A-201ENST00000399788 TMEM132AQ24JP5 1023 aa10.18□□□□□ -0.78
KDM5A-201ENST00000399788 ARID3AQ99856 593 aa10.18□□□□□ -0.78
KDM5A-201ENST00000399788 CLUAP1Q96AJ1 413 aa10.18□□□□□ -0.78
KDM5A-201ENST00000399788 SLKQ9H2G2 1235 aaPredicted RBP10.18□□□□□ -0.78
KDM5A-201ENST00000399788 IPO7O95373 1038 aaKnown RBP10.18□□□□□ -0.78
KDM5A-201ENST00000399788 CARMIL1Q5VZK9 1371 aa10.18□□□□□ -0.78
KDM5A-201ENST00000399788 CCAR2Q8N163 923 aaKnown RBP10.17□□□□□ -0.78
KDM5A-201ENST00000399788 GOLGA6L19H0YKK7 550 aa10.17□□□□□ -0.78
KDM5A-201ENST00000399788 DDX58O95786 925 aaKnown RBP10.17□□□□□ -0.78
KDM5A-201ENST00000399788 ANKRD20A12PQ8NF67 263 aa10.17□□□□□ -0.78
KDM5A-201ENST00000399788 RCAN3Q9UKA8 241 aa10.17□□□□□ -0.78
KDM5A-201ENST00000399788 FOXD4L5Q5VV16 416 aaPredicted RBP10.16□□□□□ -0.78
KDM5A-201ENST00000399788 FOXD4L4Q8WXT5 416 aaPredicted RBP10.16□□□□□ -0.78
KDM5A-201ENST00000399788 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.16□□□□□ -0.78
KDM5A-201ENST00000399788 RALBP1Q15311 655 aa10.16□□□□□ -0.78
KDM5A-201ENST00000399788 CCDC146Q8IYE0 955 aa10.16□□□□□ -0.78
KDM5A-201ENST00000399788 ANKRD30AQ9BXX3 1397 aa10.16□□□□□ -0.78
KDM5A-201ENST00000399788 CUX2O14529 1486 aa10.16□□□□□ -0.78
KDM5A-201ENST00000399788 CPLX1O14810 134 aa10.16□□□□□ -0.78
KDM5A-201ENST00000399788 HNRNPMP52272 730 aaKnown RBP eCLIP10.16□□□□□ -0.783e-8■■■■■ 27.9
KDM5A-201ENST00000399788 NFXL1Q6ZNB6 911 aa10.16□□□□□ -0.78
KDM5A-201ENST00000399788 FOXD4L1Q9NU39 408 aa10.16□□□□□ -0.78
KDM5A-201ENST00000399788 DIAPH3Q9NSV4 1193 aa10.15□□□□□ -0.78
KDM5A-201ENST00000399788 BECN2A8MW95 431 aa10.15□□□□□ -0.78
KDM5A-201ENST00000399788 ZFYVE27Q5T4F4 411 aa10.15□□□□□ -0.78
KDM5A-201ENST00000399788 PATL2C9JE40 543 aaKnown RBP10.15□□□□□ -0.78
KDM5A-201ENST00000399788 CCDC27Q2M243 656 aa10.15□□□□□ -0.79
KDM5A-201ENST00000399788 ELL2O00472 640 aaPredicted RBP10.14□□□□□ -0.79
KDM5A-201ENST00000399788 SLC4A3P48751 1232 aa10.14□□□□□ -0.79
KDM5A-201ENST00000399788 FYB1O15117 783 aa10.14□□□□□ -0.79
KDM5A-201ENST00000399788 HSPA5P11021 654 aaKnown RBP10.14□□□□□ -0.79
KDM5A-201ENST00000399788 RAPGEF4Q8WZA2 1011 aa10.14□□□□□ -0.79
KDM5A-201ENST00000399788 RUFY2Q8WXA3 655 aa10.13□□□□□ -0.79
KDM5A-201ENST00000399788 HOOK1Q9UJC3 728 aaKnown RBP10.13□□□□□ -0.79
KDM5A-201ENST00000399788 CENPJQ9HC77 1338 aaPredicted RBP10.13□□□□□ -0.79
KDM5A-201ENST00000399788 SETQ01105 290 aaPredicted RBP10.12□□□□□ -0.79
KDM5A-201ENST00000399788 NECTIN2Q92692 538 aa10.12□□□□□ -0.79
KDM5A-201ENST00000399788 ARHGAP35Q9NRY4 1499 aa10.12□□□□□ -0.79
KDM5A-201ENST00000399788 IFIT2P09913 472 aaKnown RBP10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms