RNA–Protein interactions for RNA: ENST00000399264.1

CCDC144A-205, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 2

Gene CCDC144A, Length 2,815 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-205ENST00000399264 ARID4BQ4LE39 1312 aaPredicted RBP19.69■□□□□ 0.74
CCDC144A-205ENST00000399264 KDM5DQ9BY66 1539 aa19.69■□□□□ 0.74
CCDC144A-205ENST00000399264 SMG6Q86US8 1419 aaKnown RBP19.68■□□□□ 0.74
CCDC144A-205ENST00000399264 SYCP2Q9BX26 1530 aa19.68■□□□□ 0.74
CCDC144A-205ENST00000399264 PLA2R1Q13018 1463 aa19.68■□□□□ 0.74
CCDC144A-205ENST00000399264 ARHGEF12Q9NZN5 1544 aa19.67■□□□□ 0.74
CCDC144A-205ENST00000399264 ERCC6L2Q5T890 1561 aa19.67■□□□□ 0.74
CCDC144A-205ENST00000399264 ARHGEF5Q12774 1597 aa19.66■□□□□ 0.74
CCDC144A-205ENST00000399264 TTC37Q6PGP7 1564 aa19.66■□□□□ 0.74
CCDC144A-205ENST00000399264 CCDC144AA2RUR9 1427 aa19.65■□□□□ 0.74
CCDC144A-205ENST00000399264 PLEKHH2Q8IVE3 1493 aa19.64■□□□□ 0.74
CCDC144A-205ENST00000399264 ARHGAP5Q13017 1502 aa19.64■□□□□ 0.73
CCDC144A-205ENST00000399264 PREX2Q70Z35 1606 aa19.63■□□□□ 0.73
CCDC144A-205ENST00000399264 PRAG1Q86YV5 1406 aa19.63■□□□□ 0.73
CCDC144A-205ENST00000399264 MYBBP1AQ9BQG0 1328 aaKnown RBP19.61■□□□□ 0.73
CCDC144A-205ENST00000399264 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.61■□□□□ 0.73
CCDC144A-205ENST00000399264 CC2D1BQ5T0F9 858 aaKnown RBP19.61■□□□□ 0.73
CCDC144A-205ENST00000399264 FANCIQ9NVI1 1328 aa19.61■□□□□ 0.73
CCDC144A-205ENST00000399264 CHD1O14646 1710 aa19.61■□□□□ 0.73
CCDC144A-205ENST00000399264 A2MP01023 1474 aa19.59■□□□□ 0.73
CCDC144A-205ENST00000399264 PER1O15534 1290 aaPredicted RBP19.59■□□□□ 0.73
CCDC144A-205ENST00000399264 RNF123Q5XPI4 1314 aa19.59■□□□□ 0.73
CCDC144A-205ENST00000399264 DISP3Q9P2K9 1392 aa19.59■□□□□ 0.73
CCDC144A-205ENST00000399264 RSPH4AQ5TD94 716 aa19.58■□□□□ 0.73
CCDC144A-205ENST00000399264 LRPPRCP42704 1394 aaKnown RBP19.58■□□□□ 0.73
CCDC144A-205ENST00000399264 CCDC136Q96JN2 1154 aa19.58■□□□□ 0.72
CCDC144A-205ENST00000399264 TESK2Q96S53 571 aa19.57■□□□□ 0.72
CCDC144A-205ENST00000399264 RALBP1Q15311 655 aa19.57■□□□□ 0.72
CCDC144A-205ENST00000399264 TRPM1Q7Z4N2 1603 aa19.56■□□□□ 0.72
CCDC144A-205ENST00000399264 BRD4O60885 1362 aaPredicted RBP19.55■□□□□ 0.72
CCDC144A-205ENST00000399264 CDCA7LQ96GN5 454 aa19.55■□□□□ 0.72
CCDC144A-205ENST00000399264 PANK3Q9H999 370 aa19.54■□□□□ 0.72
CCDC144A-205ENST00000399264 E9PCH4 1651 aa19.52■□□□□ 0.72
CCDC144A-205ENST00000399264 NLRP13Q86W25 1043 aa19.52■□□□□ 0.71
CCDC144A-205ENST00000399264 AFAP1Q8N556 730 aa19.52■□□□□ 0.71
CCDC144A-205ENST00000399264 KTN1Q86UP2 1357 aaKnown RBP19.51■□□□□ 0.71
CCDC144A-205ENST00000399264 PARD3Q8TEW0 1356 aa19.51■□□□□ 0.71
CCDC144A-205ENST00000399264 EXOC6Q8TAG9 804 aa19.49■□□□□ 0.71
CCDC144A-205ENST00000399264 TRAPPC8Q9Y2L5 1435 aa19.49■□□□□ 0.71
CCDC144A-205ENST00000399264 UNC13BO14795 1591 aa19.49■□□□□ 0.71
CCDC144A-205ENST00000399264 GPRASP1Q5JY77 1395 aa19.48■□□□□ 0.71
CCDC144A-205ENST00000399264 ABCC2Q92887 1545 aa19.47■□□□□ 0.71
CCDC144A-205ENST00000399264 ERICH6Q7L0X2 663 aa19.47■□□□□ 0.71
CCDC144A-205ENST00000399264 MYO5CQ9NQX4 1742 aa19.46■□□□□ 0.71
CCDC144A-205ENST00000399264 PLIN1O60240 522 aa19.45■□□□□ 0.7
CCDC144A-205ENST00000399264 RRP1P56182 461 aaKnown RBP19.45■□□□□ 0.7
CCDC144A-205ENST00000399264 EFCAB2Q5VUJ9 269 aa19.45■□□□□ 0.7
CCDC144A-205ENST00000399264 RCAN3Q9UKA8 241 aa19.45■□□□□ 0.7
CCDC144A-205ENST00000399264 ERBINQ96RT1 1412 aa19.45■□□□□ 0.7
CCDC144A-205ENST00000399264 COL17A1Q9UMD9 1497 aaPredicted RBP19.45■□□□□ 0.7
CCDC144A-205ENST00000399264 SHROOM2Q13796 1616 aa19.45■□□□□ 0.7
CCDC144A-205ENST00000399264 MAST1Q9Y2H9 1570 aa19.45■□□□□ 0.7
CCDC144A-205ENST00000399264 IQGAP3Q86VI3 1631 aa19.44■□□□□ 0.7
CCDC144A-205ENST00000399264 PAK3O75914 559 aaPredicted RBP19.43■□□□□ 0.7
CCDC144A-205ENST00000399264 PLCH2O75038 1416 aa19.43■□□□□ 0.7
CCDC144A-205ENST00000399264 PRDM15P57071 1507 aaPredicted RBP19.43■□□□□ 0.7
CCDC144A-205ENST00000399264 TMF1P82094 1093 aa19.42■□□□□ 0.7
CCDC144A-205ENST00000399264 DUOX2Q9NRD8 1548 aa19.41■□□□□ 0.7
CCDC144A-205ENST00000399264 PLXNC1O60486 1568 aa19.41■□□□□ 0.7
CCDC144A-205ENST00000399264 SKAP1Q86WV1 359 aa19.4■□□□□ 0.7
CCDC144A-205ENST00000399264 SPAG9O60271 1321 aaKnown RBP19.39■□□□□ 0.69
CCDC144A-205ENST00000399264 ADAMTS8Q9UP79 889 aa19.38■□□□□ 0.69
CCDC144A-205ENST00000399264 ZCCHC11Q5TAX3 1644 aaKnown RBP19.37■□□□□ 0.69
CCDC144A-205ENST00000399264 MAGI2Q86UL8 1455 aa19.36■□□□□ 0.69
CCDC144A-205ENST00000399264 MYT1LQ9UL68 1186 aa19.36■□□□□ 0.69
CCDC144A-205ENST00000399264 ATP10AO60312 1499 aa19.35■□□□□ 0.69
CCDC144A-205ENST00000399264 ABCC1P33527 1531 aa19.33■□□□□ 0.69
CCDC144A-205ENST00000399264 WDR7Q9Y4E6 1490 aa19.32■□□□□ 0.68
CCDC144A-205ENST00000399264 KIF3BO15066 747 aa19.31■□□□□ 0.68
CCDC144A-205ENST00000399264 C20orf194Q5TEA3 1177 aa19.31■□□□□ 0.68
CCDC144A-205ENST00000399264 PPP2R1AP30153 589 aa19.31■□□□□ 0.68
CCDC144A-205ENST00000399264 KNSTRNQ9Y448 316 aa19.31■□□□□ 0.68
CCDC144A-205ENST00000399264 WASHC2CQ9Y4E1 1318 aa19.3■□□□□ 0.68
CCDC144A-205ENST00000399264 NOP58Q9Y2X3 529 aaKnown RBP19.3■□□□□ 0.68
CCDC144A-205ENST00000399264 PDE3BQ13370 1112 aa19.3■□□□□ 0.68
CCDC144A-205ENST00000399264 NBR1Q14596 966 aa19.3■□□□□ 0.68
CCDC144A-205ENST00000399264 AMER1Q5JTC6 1135 aaPredicted RBP19.3■□□□□ 0.68
CCDC144A-205ENST00000399264 LAMC1P11047 1609 aa19.3■□□□□ 0.68
CCDC144A-205ENST00000399264 EIF2AK4Q9P2K8 1649 aaKnown RBP19.29■□□□□ 0.68
CCDC144A-205ENST00000399264 NPM2Q86SE8 214 aaKnown RBP19.29■□□□□ 0.68
CCDC144A-205ENST00000399264 BLMP54132 1417 aaPredicted RBP19.28■□□□□ 0.68
CCDC144A-205ENST00000399264 CRBNQ96SW2 442 aa19.28■□□□□ 0.68
CCDC144A-205ENST00000399264 CFAP70Q5T0N1 1121 aa19.28■□□□□ 0.68
CCDC144A-205ENST00000399264 MADDQ8WXG6 1647 aa19.27■□□□□ 0.68
CCDC144A-205ENST00000399264 PLEKHH1Q9ULM0 1364 aa19.26■□□□□ 0.67
CCDC144A-205ENST00000399264 RNF17Q9BXT8 1623 aaKnown RBP19.26■□□□□ 0.67
CCDC144A-205ENST00000399264 CCDC146Q8IYE0 955 aa19.26■□□□□ 0.67
CCDC144A-205ENST00000399264 UGGT1Q9NYU2 1555 aa19.25■□□□□ 0.67
CCDC144A-205ENST00000399264 SCAPERQ9BY12 1400 aa19.25■□□□□ 0.67
CCDC144A-205ENST00000399264 CLTCL1P53675 1640 aa19.25■□□□□ 0.67
CCDC144A-205ENST00000399264 ZFYVE16Q7Z3T8 1539 aa19.24■□□□□ 0.67
CCDC144A-205ENST00000399264 ADGRF5Q8IZF2 1346 aa19.24■□□□□ 0.67
CCDC144A-205ENST00000399264 CLASP1Q7Z460 1538 aa19.23■□□□□ 0.67
CCDC144A-205ENST00000399264 ANP32AP39687 249 aaKnown RBP19.23■□□□□ 0.67
CCDC144A-205ENST00000399264 IPO9Q96P70 1041 aaKnown RBP19.23■□□□□ 0.67
CCDC144A-205ENST00000399264 BCL11AQ9H165 835 aa19.23■□□□□ 0.67
CCDC144A-205ENST00000399264 WDR43Q15061 677 aaKnown RBP eCLIP19.22■□□□□ 0.67
CCDC144A-205ENST00000399264 UHRF1BP1LA0JNW5 1464 aa19.21■□□□□ 0.67
CCDC144A-205ENST00000399264 PTPRTO14522 1441 aa19.21■□□□□ 0.67
CCDC144A-205ENST00000399264 TRPM2O94759 1503 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms