RNA–Protein interactions for RNA: ENST00000398741.5

PRAME-201, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRAME, Length 2,202 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-201ENST00000398741 CCDC141Q6ZP82 1450 aa17.76■□□□□ 0.43
PRAME-201ENST00000398741 TMC1Q8TDI8 760 aa17.75■□□□□ 0.43
PRAME-201ENST00000398741 ST20-MTHFSA0A0A6YYL1 179 aa17.75■□□□□ 0.43
PRAME-201ENST00000398741 NUDCQ9Y266 331 aa17.75■□□□□ 0.43
PRAME-201ENST00000398741 RSPH4AQ5TD94 716 aa17.74■□□□□ 0.43
PRAME-201ENST00000398741 PNISRQ8TF01 805 aaKnown RBP17.71■□□□□ 0.43
PRAME-201ENST00000398741 FAM135AQ9P2D6 1515 aa17.71■□□□□ 0.43
PRAME-201ENST00000398741 SAMD9LQ8IVG5 1584 aa17.71■□□□□ 0.43
PRAME-201ENST00000398741 PREX2Q70Z35 1606 aa17.7■□□□□ 0.42
PRAME-201ENST00000398741 MSH5O43196 834 aa17.7■□□□□ 0.42
PRAME-201ENST00000398741 KTN1Q86UP2 1357 aaKnown RBP17.69■□□□□ 0.42
PRAME-201ENST00000398741 CCDC144AA2RUR9 1427 aa17.69■□□□□ 0.42
PRAME-201ENST00000398741 RALBP1Q15311 655 aa17.69■□□□□ 0.42
PRAME-201ENST00000398741 MYBBP1AQ9BQG0 1328 aaKnown RBP17.68■□□□□ 0.42
PRAME-201ENST00000398741 RIMBP3CA6NJZ7 1639 aa17.68■□□□□ 0.42
PRAME-201ENST00000398741 RIMBP3BA6NNM3 1639 aa17.68■□□□□ 0.42
PRAME-201ENST00000398741 RIMBP3Q9UFD9 1639 aa17.68■□□□□ 0.42
PRAME-201ENST00000398741 ERICH6Q7L0X2 663 aa17.68■□□□□ 0.42
PRAME-201ENST00000398741 BRD4O60885 1362 aaPredicted RBP17.67■□□□□ 0.42
PRAME-201ENST00000398741 TTC37Q6PGP7 1564 aa17.66■□□□□ 0.42
PRAME-201ENST00000398741 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.66■□□□□ 0.427e-13■□□□□ 11.3
PRAME-201ENST00000398741 CDC42BPBQ9Y5S2 1711 aa17.66■□□□□ 0.42
PRAME-201ENST00000398741 ARHGAP5Q13017 1502 aa17.65■□□□□ 0.42
PRAME-201ENST00000398741 SYCP2Q9BX26 1530 aa17.65■□□□□ 0.42
PRAME-201ENST00000398741 RNF123Q5XPI4 1314 aa17.65■□□□□ 0.42
PRAME-201ENST00000398741 PRAG1Q86YV5 1406 aa17.64■□□□□ 0.41
PRAME-201ENST00000398741 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.64■□□□□ 0.415e-17■■□□□ 11.4
PRAME-201ENST00000398741 SENP3-EIF4A1A0A087X0R7 540 aa17.63■□□□□ 0.41
PRAME-201ENST00000398741 RGL3Q3MIN7 710 aa17.63■□□□□ 0.41
PRAME-201ENST00000398741 LRPPRCP42704 1394 aaKnown RBP17.63■□□□□ 0.41
PRAME-201ENST00000398741 CCDC136Q96JN2 1154 aa17.62■□□□□ 0.41
PRAME-201ENST00000398741 MAST1Q9Y2H9 1570 aa17.61■□□□□ 0.41
PRAME-201ENST00000398741 WDR7Q9Y4E6 1490 aa17.61■□□□□ 0.41
PRAME-201ENST00000398741 E9PCH4 1651 aa17.6■□□□□ 0.41
PRAME-201ENST00000398741 UNC13BO14795 1591 aa17.6■□□□□ 0.41
PRAME-201ENST00000398741 TRPM1Q7Z4N2 1603 aa17.6■□□□□ 0.41
PRAME-201ENST00000398741 ASXL2Q76L83 1435 aa17.59■□□□□ 0.41
PRAME-201ENST00000398741 PLEKHH2Q8IVE3 1493 aa17.59■□□□□ 0.41
PRAME-201ENST00000398741 CYB5RLQ6IPT4 315 aa17.59■□□□□ 0.41
PRAME-201ENST00000398741 NLRP13Q86W25 1043 aa17.59■□□□□ 0.41
PRAME-201ENST00000398741 MYO5CQ9NQX4 1742 aa17.59■□□□□ 0.41
PRAME-201ENST00000398741 NBPF1Q3BBV0 1214 aa17.57■□□□□ 0.4
PRAME-201ENST00000398741 DNAJC5Q9H3Z4 198 aa17.57■□□□□ 0.4
PRAME-201ENST00000398741 GPRASP1Q5JY77 1395 aa17.57■□□□□ 0.4
PRAME-201ENST00000398741 A2MP01023 1474 aa17.57■□□□□ 0.4
PRAME-201ENST00000398741 PLA2R1Q13018 1463 aa17.57■□□□□ 0.4
PRAME-201ENST00000398741 PLXNC1O60486 1568 aa17.56■□□□□ 0.4
PRAME-201ENST00000398741 PARD3Q8TEW0 1356 aa17.56■□□□□ 0.4
PRAME-201ENST00000398741 IQGAP3Q86VI3 1631 aa17.54■□□□□ 0.4
PRAME-201ENST00000398741 NPM1P06748 294 aaKnown RBP eCLIP17.54■□□□□ 0.4
PRAME-201ENST00000398741 DUOX2Q9NRD8 1548 aa17.53■□□□□ 0.4
PRAME-201ENST00000398741 COL17A1Q9UMD9 1497 aaPredicted RBP17.53■□□□□ 0.4
PRAME-201ENST00000398741 PLCH2O75038 1416 aa17.52■□□□□ 0.4
PRAME-201ENST00000398741 LAMC1P11047 1609 aa17.52■□□□□ 0.4
PRAME-201ENST00000398741 ABCA9Q8IUA7 1624 aa17.52■□□□□ 0.4
PRAME-201ENST00000398741 EIF2AK4Q9P2K8 1649 aaKnown RBP17.52■□□□□ 0.4
PRAME-201ENST00000398741 PRDM15P57071 1507 aaPredicted RBP17.52■□□□□ 0.4
PRAME-201ENST00000398741 ERBINQ96RT1 1412 aa17.51■□□□□ 0.39
PRAME-201ENST00000398741 WASHC2CQ9Y4E1 1318 aa17.51■□□□□ 0.39
PRAME-201ENST00000398741 PER1O15534 1290 aaPredicted RBP17.51■□□□□ 0.39
PRAME-201ENST00000398741 DISP3Q9P2K9 1392 aa17.5■□□□□ 0.39
PRAME-201ENST00000398741 RRP1P56182 461 aaKnown RBP17.5■□□□□ 0.39
PRAME-201ENST00000398741 TMF1P82094 1093 aa17.5■□□□□ 0.39
PRAME-201ENST00000398741 PDE3BQ13370 1112 aa17.5■□□□□ 0.39
PRAME-201ENST00000398741 SALL2Q9Y467 1007 aaPredicted RBP17.5■□□□□ 0.39
PRAME-201ENST00000398741 TESK2Q96S53 571 aa17.49■□□□□ 0.39
PRAME-201ENST00000398741 ATP10AO60312 1499 aa17.49■□□□□ 0.39
PRAME-201ENST00000398741 CC2D1BQ5T0F9 858 aaKnown RBP17.49■□□□□ 0.39
PRAME-201ENST00000398741 RCAN3Q9UKA8 241 aa17.48■□□□□ 0.39
PRAME-201ENST00000398741 MAGI2Q86UL8 1455 aa17.48■□□□□ 0.39
PRAME-201ENST00000398741 EFCAB2Q5VUJ9 269 aa17.48■□□□□ 0.39
PRAME-201ENST00000398741 PANK3Q9H999 370 aa17.47■□□□□ 0.39
PRAME-201ENST00000398741 ARAP3Q8WWN8 1544 aa17.47■□□□□ 0.39
PRAME-201ENST00000398741 NOP58Q9Y2X3 529 aaKnown RBP17.43■□□□□ 0.38
PRAME-201ENST00000398741 ABCC1P33527 1531 aa17.42■□□□□ 0.38
PRAME-201ENST00000398741 ANP32AP39687 249 aaKnown RBP17.42■□□□□ 0.38
PRAME-201ENST00000398741 EXOC6Q8TAG9 804 aa17.42■□□□□ 0.38
PRAME-201ENST00000398741 INSRP06213 1382 aa17.42■□□□□ 0.38
PRAME-201ENST00000398741 BLMP54132 1417 aaPredicted RBP17.4■□□□□ 0.38
PRAME-201ENST00000398741 TRAPPC8Q9Y2L5 1435 aa17.4■□□□□ 0.38
PRAME-201ENST00000398741 ZMYM4Q5VZL5 1548 aa17.4■□□□□ 0.38
PRAME-201ENST00000398741 FANCAO15360 1455 aa17.4■□□□□ 0.38
PRAME-201ENST00000398741 RNF17Q9BXT8 1623 aaKnown RBP17.4■□□□□ 0.38
PRAME-201ENST00000398741 SPAG9O60271 1321 aaKnown RBP17.39■□□□□ 0.37
PRAME-201ENST00000398741 CDCA7LQ96GN5 454 aa17.39■□□□□ 0.37
PRAME-201ENST00000398741 MYT1LQ9UL68 1186 aa17.38■□□□□ 0.37
PRAME-201ENST00000398741 CD109Q6YHK3 1445 aa17.37■□□□□ 0.37
PRAME-201ENST00000398741 KNSTRNQ9Y448 316 aa17.36■□□□□ 0.37
PRAME-201ENST00000398741 CDCA8Q53HL2 280 aa17.36■□□□□ 0.37
PRAME-201ENST00000398741 STAC3Q96MF2 364 aa17.35■□□□□ 0.37
PRAME-201ENST00000398741 RTEL1-TNFRSF6BF6WH68 1400 aa17.35■□□□□ 0.37
PRAME-201ENST00000398741 MADDQ8WXG6 1647 aa17.34■□□□□ 0.37
PRAME-201ENST00000398741 MAP3K4Q9Y6R4 1608 aa17.34■□□□□ 0.37
PRAME-201ENST00000398741 IPO9Q96P70 1041 aaKnown RBP17.34■□□□□ 0.37
PRAME-201ENST00000398741 TRPM2O94759 1503 aa17.34■□□□□ 0.37
PRAME-201ENST00000398741 TCERG1O14776 1098 aaKnown RBP17.33■□□□□ 0.37
PRAME-201ENST00000398741 GLI2P10070 1586 aa17.33■□□□□ 0.36
PRAME-201ENST00000398741 AFAP1Q8N556 730 aa17.33■□□□□ 0.36
PRAME-201ENST00000398741 WDR43Q15061 677 aaKnown RBP eCLIP17.32■□□□□ 0.368e-17■□□□□ 8.1
PRAME-201ENST00000398741 SCAF11Q99590 1463 aaKnown RBP17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms