RNA–Protein interactions for RNA: ENST00000397998.7

CSGALNACT1-202, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 2

Gene CSGALNACT1, Length 3,962 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-202ENST00000397998 CFAP53Q96M91 514 aa14.25□□□□□ -0.13
CSGALNACT1-202ENST00000397998 EPRSP07814 1512 aaKnown RBP14.25□□□□□ -0.13
CSGALNACT1-202ENST00000397998 FRAT2O75474 233 aaPredicted RBP14.24□□□□□ -0.13
CSGALNACT1-202ENST00000397998 COG6Q9Y2V7 657 aa14.24□□□□□ -0.13
CSGALNACT1-202ENST00000397998 CARMIL2Q6F5E8 1435 aa14.24□□□□□ -0.13
CSGALNACT1-202ENST00000397998 L1TD1Q5T7N2 865 aaKnown RBP14.24□□□□□ -0.13
CSGALNACT1-202ENST00000397998 C20orf194Q5TEA3 1177 aa14.23□□□□□ -0.13
CSGALNACT1-202ENST00000397998 MORC1Q86VD1 984 aa14.23□□□□□ -0.13
CSGALNACT1-202ENST00000397998 BCL2L13Q9BXK5 485 aa14.23□□□□□ -0.13
CSGALNACT1-202ENST00000397998 RRP7AQ9Y3A4 280 aaKnown RBP14.23□□□□□ -0.13
CSGALNACT1-202ENST00000397998 ABCC5O15440 1437 aa14.23□□□□□ -0.13
CSGALNACT1-202ENST00000397998 DNMBPQ6XZF7 1577 aa14.22□□□□□ -0.13
CSGALNACT1-202ENST00000397998 CENPJQ9HC77 1338 aaPredicted RBP14.22□□□□□ -0.13
CSGALNACT1-202ENST00000397998 PRG4Q92954 1404 aaPredicted RBP14.22□□□□□ -0.13
CSGALNACT1-202ENST00000397998 ROCK1Q13464 1354 aa14.21□□□□□ -0.13
CSGALNACT1-202ENST00000397998 CFAP43Q8NDM7 1665 aa14.21□□□□□ -0.13
CSGALNACT1-202ENST00000397998 U2SURPO15042 1029 aaKnown RBP14.2□□□□□ -0.14
CSGALNACT1-202ENST00000397998 PRDM2Q13029 1718 aa14.2□□□□□ -0.14
CSGALNACT1-202ENST00000397998 MFAP1P55081 439 aaKnown RBP14.19□□□□□ -0.14
CSGALNACT1-202ENST00000397998 SNAPC4Q5SXM2 1469 aa14.18□□□□□ -0.14
CSGALNACT1-202ENST00000397998 HSCBQ8IWL3 235 aa14.18□□□□□ -0.14
CSGALNACT1-202ENST00000397998 GRIN2BQ13224 1484 aa14.17□□□□□ -0.14
CSGALNACT1-202ENST00000397998 HECW1Q76N89 1606 aa14.17□□□□□ -0.14
CSGALNACT1-202ENST00000397998 RWDD1Q9H446 243 aaPredicted RBP14.17□□□□□ -0.14
CSGALNACT1-202ENST00000397998 E9PSI1 815 aa14.17□□□□□ -0.14
CSGALNACT1-202ENST00000397998 PRKCSHP14314 528 aaPredicted RBP14.17□□□□□ -0.14
CSGALNACT1-202ENST00000397998 NCLP19338 710 aaKnown RBP14.17□□□□□ -0.14
CSGALNACT1-202ENST00000397998 PMFBP1Q8TBY8 1022 aa14.16□□□□□ -0.14
CSGALNACT1-202ENST00000397998 PANK1Q8TE04 598 aa14.16□□□□□ -0.14
CSGALNACT1-202ENST00000397998 HSP90AB1P08238 724 aaKnown RBP14.16□□□□□ -0.14
CSGALNACT1-202ENST00000397998 DHX29Q7Z478 1369 aaKnown RBP14.16□□□□□ -0.14
CSGALNACT1-202ENST00000397998 BCAR3O75815 825 aa14.16□□□□□ -0.14
CSGALNACT1-202ENST00000397998 PPP2R1AP30153 589 aa14.16□□□□□ -0.14
CSGALNACT1-202ENST00000397998 GOLGA6L3A6NEY3 463 aa14.15□□□□□ -0.14
CSGALNACT1-202ENST00000397998 U2AF1L5P0DN76 240 aaPredicted RBP14.15□□□□□ -0.14
CSGALNACT1-202ENST00000397998 U2AF1Q01081 240 aaKnown RBP eCLIP14.15□□□□□ -0.14
CSGALNACT1-202ENST00000397998 CGNL1Q0VF96 1302 aa14.15□□□□□ -0.14
CSGALNACT1-202ENST00000397998 UGGT2Q9NYU1 1516 aa14.15□□□□□ -0.14
CSGALNACT1-202ENST00000397998 MAPK8IP3Q9UPT6 1336 aa14.15□□□□□ -0.14
CSGALNACT1-202ENST00000397998 RSPH4AQ5TD94 716 aa14.15□□□□□ -0.14
CSGALNACT1-202ENST00000397998 PNNQ9H307 717 aaKnown RBP14.15□□□□□ -0.14
CSGALNACT1-202ENST00000397998 CUL7Q14999 1698 aa14.14□□□□□ -0.15
CSGALNACT1-202ENST00000397998 GOLGA6L22H0YM25 854 aa14.14□□□□□ -0.15
CSGALNACT1-202ENST00000397998 SAFB2Q14151 953 aaKnown RBP eCLIP14.14□□□□□ -0.15
CSGALNACT1-202ENST00000397998 SLC24A1O60721 1099 aa14.13□□□□□ -0.15
CSGALNACT1-202ENST00000397998 ITPRIPQ8IWB1 547 aa14.13□□□□□ -0.15
CSGALNACT1-202ENST00000397998 MYH16Q9H6N6 1097 aa14.13□□□□□ -0.15
CSGALNACT1-202ENST00000397998 TROQ12816 1431 aaPredicted RBP14.12□□□□□ -0.15
CSGALNACT1-202ENST00000397998 RNF123Q5XPI4 1314 aa14.12□□□□□ -0.15
CSGALNACT1-202ENST00000397998 WASHC2CQ9Y4E1 1318 aa14.12□□□□□ -0.15
CSGALNACT1-202ENST00000397998 ERCC6Q03468 1493 aa14.12□□□□□ -0.15
CSGALNACT1-202ENST00000397998 CC2D2AQ9P2K1 1620 aa14.11□□□□□ -0.15
CSGALNACT1-202ENST00000397998 C9orf84Q5VXU9 1444 aa14.11□□□□□ -0.15
CSGALNACT1-202ENST00000397998 RSPH6AQ9H0K4 717 aa14.11□□□□□ -0.15
CSGALNACT1-202ENST00000397998 SMC4Q9NTJ3 1288 aa14.1□□□□□ -0.15
CSGALNACT1-202ENST00000397998 THOC2Q8NI27 1593 aaKnown RBP14.09□□□□□ -0.15
CSGALNACT1-202ENST00000397998 DNAJC5BQ9UF47 199 aa14.09□□□□□ -0.15
CSGALNACT1-202ENST00000397998 EFCAB2Q5VUJ9 269 aa14.09□□□□□ -0.15
CSGALNACT1-202ENST00000397998 FOXD4L1Q9NU39 408 aa14.09□□□□□ -0.15
CSGALNACT1-202ENST00000397998 STAG3Q9UJ98 1225 aa14.08□□□□□ -0.15
CSGALNACT1-202ENST00000397998 KIF3BO15066 747 aa14.08□□□□□ -0.16
CSGALNACT1-202ENST00000397998 TRAK1Q9UPV9 953 aa14.07□□□□□ -0.16
CSGALNACT1-202ENST00000397998 EIF3AQ14152 1382 aaKnown RBP14.07□□□□□ -0.16
CSGALNACT1-202ENST00000397998 URB2Q14146 1524 aaKnown RBP14.06□□□□□ -0.16
CSGALNACT1-202ENST00000397998 CAMSAP2Q08AD1 1489 aa14.06□□□□□ -0.16
CSGALNACT1-202ENST00000397998 TCOF1Q13428 1488 aaKnown RBP14.06□□□□□ -0.16
CSGALNACT1-202ENST00000397998 IQGAP2Q13576 1575 aa14.06□□□□□ -0.16
CSGALNACT1-202ENST00000397998 KANK1Q14678 1352 aa14.05□□□□□ -0.16
CSGALNACT1-202ENST00000397998 DUSP27Q5VZP5 1158 aa14.05□□□□□ -0.16
CSGALNACT1-202ENST00000397998 POGKQ9P215 609 aa14.05□□□□□ -0.16
CSGALNACT1-202ENST00000397998 TEX14Q8IWB6 1497 aa14.05□□□□□ -0.16
CSGALNACT1-202ENST00000397998 SPATA31E1Q6ZUB1 1445 aa14.05□□□□□ -0.16
CSGALNACT1-202ENST00000397998 ERBINQ96RT1 1412 aa14.05□□□□□ -0.16
CSGALNACT1-202ENST00000397998 SLFN5Q08AF3 891 aa14.04□□□□□ -0.16
CSGALNACT1-202ENST00000397998 SPAG9O60271 1321 aaKnown RBP14.04□□□□□ -0.16
CSGALNACT1-202ENST00000397998 SRPK2P78362 688 aaKnown RBP14.03□□□□□ -0.16
CSGALNACT1-202ENST00000397998 PTPRGP23470 1445 aa14.03□□□□□ -0.16
CSGALNACT1-202ENST00000397998 GBP4Q96PP9 640 aa14.02□□□□□ -0.16
CSGALNACT1-202ENST00000397998 STK26Q9P289 416 aa14.02□□□□□ -0.16
CSGALNACT1-202ENST00000397998 TPRNQ4KMQ1 711 aa14.02□□□□□ -0.17
CSGALNACT1-202ENST00000397998 NUTM2DQ5VT03 806 aaPredicted RBP14.02□□□□□ -0.17
CSGALNACT1-202ENST00000397998 ZKSCAN2Q63HK3 967 aa14.02□□□□□ -0.17
CSGALNACT1-202ENST00000397998 PDZRN3Q9UPQ7 1066 aa14.02□□□□□ -0.17
CSGALNACT1-202ENST00000397998 GGT6Q6P531 493 aa14.01□□□□□ -0.17
CSGALNACT1-202ENST00000397998 LRPPRCP42704 1394 aaKnown RBP14.01□□□□□ -0.17
CSGALNACT1-202ENST00000397998 PLB1Q6P1J6 1458 aa14.01□□□□□ -0.17
CSGALNACT1-202ENST00000397998 DISP3Q9P2K9 1392 aa14.01□□□□□ -0.17
CSGALNACT1-202ENST00000397998 PDE3AQ14432 1141 aa14.01□□□□□ -0.17
CSGALNACT1-202ENST00000397998 CTTNBP2Q8WZ74 1663 aa14□□□□□ -0.17
CSGALNACT1-202ENST00000397998 IPO8O15397 1037 aaKnown RBP14□□□□□ -0.17
CSGALNACT1-202ENST00000397998 TCP11L2Q8N4U5 519 aa14□□□□□ -0.17
CSGALNACT1-202ENST00000397998 CFAP70Q5T0N1 1121 aa14□□□□□ -0.17
CSGALNACT1-202ENST00000397998 KDM6BO15054 1643 aa14□□□□□ -0.17
CSGALNACT1-202ENST00000397998 MAGI3Q5TCQ9 1506 aa14□□□□□ -0.17
CSGALNACT1-202ENST00000397998 CHMP5Q9NZZ3 219 aa14□□□□□ -0.17
CSGALNACT1-202ENST00000397998 NPM1P06748 294 aaKnown RBP eCLIP13.99□□□□□ -0.17
CSGALNACT1-202ENST00000397998 C22orf23Q9BZE7 217 aa13.99□□□□□ -0.17
CSGALNACT1-202ENST00000397998 FAM43AQ8N2R8 423 aa13.99□□□□□ -0.17
CSGALNACT1-202ENST00000397998 APBB1O00213 710 aa13.99□□□□□ -0.17
CSGALNACT1-202ENST00000397998 C8orf34Q49A92 452 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms