RNA–Protein interactions for RNA: ENST00000396684.2

ATN1-202, Transcript of atrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATN1, Length 4,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1-202ENST00000396684 ADGRL2O95490 1459 aa16.01■□□□□ 0.15
ATN1-202ENST00000396684 NUTM2DQ5VT03 806 aaPredicted RBP16.01■□□□□ 0.15
ATN1-202ENST00000396684 SALL2Q9Y467 1007 aaPredicted RBP16.01■□□□□ 0.15
ATN1-202ENST00000396684 CC2D1BQ5T0F9 858 aaKnown RBP16■□□□□ 0.15
ATN1-202ENST00000396684 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.99■□□□□ 0.154e-11■■□□□ 12.1
ATN1-202ENST00000396684 DUOX2Q9NRD8 1548 aa15.99■□□□□ 0.15
ATN1-202ENST00000396684 STK26Q9P289 416 aa15.99■□□□□ 0.15
ATN1-202ENST00000396684 VGFO15240 615 aaPredicted RBP15.99■□□□□ 0.15
ATN1-202ENST00000396684 DENND4BO75064 1496 aaPredicted RBP15.99■□□□□ 0.15
ATN1-202ENST00000396684 NEFMP07197 916 aa15.99■□□□□ 0.15
ATN1-202ENST00000396684 CCDC7Q96M83 1385 aa15.98■□□□□ 0.15
ATN1-202ENST00000396684 SAFB2Q14151 953 aaKnown RBP eCLIP15.97■□□□□ 0.15
ATN1-202ENST00000396684 DHX29Q7Z478 1369 aaKnown RBP15.97■□□□□ 0.15
ATN1-202ENST00000396684 ERBINQ96RT1 1412 aa15.97■□□□□ 0.15
ATN1-202ENST00000396684 SCAF1Q9H7N4 1312 aaKnown RBP15.97■□□□□ 0.15
ATN1-202ENST00000396684 LRRIQ1Q96JM4 1722 aa15.96■□□□□ 0.15
ATN1-202ENST00000396684 GCC2Q8IWJ2 1684 aa15.96■□□□□ 0.15
ATN1-202ENST00000396684 KIF7Q2M1P5 1343 aa15.96■□□□□ 0.15
ATN1-202ENST00000396684 WASHC2AQ641Q2 1341 aa15.96■□□□□ 0.14
ATN1-202ENST00000396684 FKBP8Q14318 412 aa15.96■□□□□ 0.14
ATN1-202ENST00000396684 KTN1Q86UP2 1357 aaKnown RBP15.95■□□□□ 0.14
ATN1-202ENST00000396684 CLASP1Q7Z460 1538 aa15.95■□□□□ 0.14
ATN1-202ENST00000396684 ZNF518AQ6AHZ1 1483 aa15.95■□□□□ 0.14
ATN1-202ENST00000396684 MYO5CQ9NQX4 1742 aa15.94■□□□□ 0.14
ATN1-202ENST00000396684 TRAK1Q9UPV9 953 aa15.94■□□□□ 0.14
ATN1-202ENST00000396684 ZCCHC11Q5TAX3 1644 aaKnown RBP15.94■□□□□ 0.14
ATN1-202ENST00000396684 SRPK2P78362 688 aaKnown RBP15.94■□□□□ 0.14
ATN1-202ENST00000396684 ARHGEF5Q12774 1597 aa15.93■□□□□ 0.14
ATN1-202ENST00000396684 MBD5Q9P267 1494 aa15.93■□□□□ 0.14
ATN1-202ENST00000396684 ADCY10Q96PN6 1610 aa15.93■□□□□ 0.14
ATN1-202ENST00000396684 RTEL1-TNFRSF6BF6WH68 1400 aa15.92■□□□□ 0.14
ATN1-202ENST00000396684 TTC37Q6PGP7 1564 aa15.92■□□□□ 0.14
ATN1-202ENST00000396684 RALBP1Q15311 655 aa15.92■□□□□ 0.14
ATN1-202ENST00000396684 NBPF1Q3BBV0 1214 aa15.92■□□□□ 0.14
ATN1-202ENST00000396684 ADGBQ8N7X0 1667 aa15.92■□□□□ 0.14
ATN1-202ENST00000396684 PZPP20742 1482 aa15.91■□□□□ 0.14
ATN1-202ENST00000396684 FAM135AQ9P2D6 1515 aa15.91■□□□□ 0.14
ATN1-202ENST00000396684 PRKRIP1Q9H875 184 aaPredicted RBP15.9■□□□□ 0.14
ATN1-202ENST00000396684 PREX2Q70Z35 1606 aa15.9■□□□□ 0.14
ATN1-202ENST00000396684 SAMD9LQ8IVG5 1584 aa15.9■□□□□ 0.14
ATN1-202ENST00000396684 CNTLNQ9NXG0 1405 aa15.89■□□□□ 0.13
ATN1-202ENST00000396684 A2MP01023 1474 aa15.88■□□□□ 0.13
ATN1-202ENST00000396684 SHROOM2Q13796 1616 aa15.88■□□□□ 0.13
ATN1-202ENST00000396684 SENP3-EIF4A1A0A087X0R7 540 aa15.88■□□□□ 0.13
ATN1-202ENST00000396684 CFAP53Q96M91 514 aa15.88■□□□□ 0.13
ATN1-202ENST00000396684 CDC42BPAQ5VT25 1732 aa15.88■□□□□ 0.13
ATN1-202ENST00000396684 CFAP70Q5T0N1 1121 aa15.88■□□□□ 0.13
ATN1-202ENST00000396684 SLC52A1Q9NWF4 448 aa15.87■□□□□ 0.13
ATN1-202ENST00000396684 PANK3Q9H999 370 aa15.86■□□□□ 0.13
ATN1-202ENST00000396684 TNNT2P45379 298 aaPredicted RBP15.85■□□□□ 0.13
ATN1-202ENST00000396684 KDM6BO15054 1643 aa15.85■□□□□ 0.13
ATN1-202ENST00000396684 EID1Q9Y6B2 187 aa15.85■□□□□ 0.13
ATN1-202ENST00000396684 TEX14Q8IWB6 1497 aa15.84■□□□□ 0.13
ATN1-202ENST00000396684 ATP7AQ04656 1500 aa15.84■□□□□ 0.13
ATN1-202ENST00000396684 C14orf37Q86TY3 774 aa15.83■□□□□ 0.12
ATN1-202ENST00000396684 CANXP27824 592 aaKnown RBP15.83■□□□□ 0.12
ATN1-202ENST00000396684 MORC1Q86VD1 984 aa15.82■□□□□ 0.12
ATN1-202ENST00000396684 NLRP13Q86W25 1043 aa15.82■□□□□ 0.12
ATN1-202ENST00000396684 CENPJQ9HC77 1338 aaPredicted RBP15.82■□□□□ 0.12
ATN1-202ENST00000396684 ABCC1P33527 1531 aa15.81■□□□□ 0.12
ATN1-202ENST00000396684 TMEM132EQ6IEE7 984 aa15.8■□□□□ 0.12
ATN1-202ENST00000396684 RPGRIP1LQ68CZ1 1315 aa15.8■□□□□ 0.12
ATN1-202ENST00000396684 HDGFL2Q7Z4V5 671 aaPredicted RBP15.8■□□□□ 0.12
ATN1-202ENST00000396684 MYBBP1AQ9BQG0 1328 aaKnown RBP15.8■□□□□ 0.12
ATN1-202ENST00000396684 EVC2Q86UK5 1308 aa15.79■□□□□ 0.12
ATN1-202ENST00000396684 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.79■□□□□ 0.12
ATN1-202ENST00000396684 PPM1GO15355 546 aaPredicted RBP15.78■□□□□ 0.12
ATN1-202ENST00000396684 SUPT16HQ9Y5B9 1047 aaKnown RBP15.78■□□□□ 0.12
ATN1-202ENST00000396684 NEO1Q92859 1461 aa15.77■□□□□ 0.12
ATN1-202ENST00000396684 IRX6P78412 446 aaPredicted RBP15.77■□□□□ 0.12
ATN1-202ENST00000396684 ERICH6Q7L0X2 663 aa15.77■□□□□ 0.12
ATN1-202ENST00000396684 POGZQ7Z3K3 1410 aa15.77■□□□□ 0.11
ATN1-202ENST00000396684 C11orf95C9JLR9 678 aaPredicted RBP15.76■□□□□ 0.11
ATN1-202ENST00000396684 MYT1Q01538 1121 aa15.76■□□□□ 0.11
ATN1-202ENST00000396684 TERF2IPQ9NYB0 399 aa15.76■□□□□ 0.11
ATN1-202ENST00000396684 NUDCQ9Y266 331 aa15.76■□□□□ 0.11
ATN1-202ENST00000396684 ARHGEF12Q9NZN5 1544 aa15.75■□□□□ 0.11
ATN1-202ENST00000396684 MINK1Q8N4C8 1332 aaPredicted RBP15.75■□□□□ 0.11
ATN1-202ENST00000396684 CFAP74Q9C0B2 1584 aa15.74■□□□□ 0.11
ATN1-202ENST00000396684 MAST1Q9Y2H9 1570 aa15.74■□□□□ 0.11
ATN1-202ENST00000396684 ARAP3Q8WWN8 1544 aa15.74■□□□□ 0.11
ATN1-202ENST00000396684 PPP6R1Q9UPN7 881 aa15.74■□□□□ 0.11
ATN1-202ENST00000396684 CDC42BPBQ9Y5S2 1711 aa15.73■□□□□ 0.11
ATN1-202ENST00000396684 IDI1Q13907 227 aa15.73■□□□□ 0.11
ATN1-202ENST00000396684 RALGAPBQ86X10 1494 aa15.73■□□□□ 0.11
ATN1-202ENST00000396684 ADGRF5Q8IZF2 1346 aa15.72■□□□□ 0.11
ATN1-202ENST00000396684 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.71■□□□□ 0.11
ATN1-202ENST00000396684 FBXO31Q5XUX0 539 aaPredicted RBP15.71■□□□□ 0.11
ATN1-202ENST00000396684 PRAG1Q86YV5 1406 aa15.71■□□□□ 0.1
ATN1-202ENST00000396684 NEUROD2Q15784 382 aa15.7■□□□□ 0.1
ATN1-202ENST00000396684 U2SURPO15042 1029 aaKnown RBP15.7■□□□□ 0.1
ATN1-202ENST00000396684 CROCC2H7BZ55 1655 aa15.69■□□□□ 0.1
ATN1-202ENST00000396684 MAPK8IP3Q9UPT6 1336 aa15.68■□□□□ 0.1
ATN1-202ENST00000396684 NOS1P29475 1434 aa15.68■□□□□ 0.1
ATN1-202ENST00000396684 CGNL1Q0VF96 1302 aa15.68■□□□□ 0.1
ATN1-202ENST00000396684 CCDC136Q96JN2 1154 aa15.67■□□□□ 0.1
ATN1-202ENST00000396684 PLXNC1O60486 1568 aa15.67■□□□□ 0.1
ATN1-202ENST00000396684 ZFYVE16Q7Z3T8 1539 aa15.65■□□□□ 0.1
ATN1-202ENST00000396684 ABCA9Q8IUA7 1624 aa15.65■□□□□ 0.1
ATN1-202ENST00000396684 UHRF1BP1Q6BDS2 1440 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms