RNA–Protein interactions for RNA: ENST00000396027.8

XRCC4-203, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene XRCC4, Length 1,530 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-203ENST00000396027 OXER1Q8TDS5 423 aa6.64□□□□□ -1.35
XRCC4-203ENST00000396027 WIPF1O43516 503 aa6.63□□□□□ -1.35
XRCC4-203ENST00000396027 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.63□□□□□ -1.35
XRCC4-203ENST00000396027 POTECB2RU33 542 aa6.62□□□□□ -1.35
XRCC4-203ENST00000396027 ADAM33Q9BZ11 813 aa6.62□□□□□ -1.35
XRCC4-203ENST00000396027 WFS1O76024 890 aa6.61□□□□□ -1.35
XRCC4-203ENST00000396027 DSG2Q14126 1118 aa6.61□□□□□ -1.35
XRCC4-203ENST00000396027 ONECUT3O60422 494 aaPredicted RBP6.6□□□□□ -1.35
XRCC4-203ENST00000396027 LRCH3Q96II8 777 aa6.6□□□□□ -1.35
XRCC4-203ENST00000396027 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.6□□□□□ -1.35
XRCC4-203ENST00000396027 HPS5Q9UPZ3 1129 aa6.6□□□□□ -1.35
XRCC4-203ENST00000396027 TJAP1Q5JTD0 557 aa6.6□□□□□ -1.35
XRCC4-203ENST00000396027 PROX2Q3B8N5 592 aa6.59□□□□□ -1.35
XRCC4-203ENST00000396027 ANO8Q9HCE9 1232 aaPredicted RBP6.59□□□□□ -1.35
XRCC4-203ENST00000396027 IL21Q9HBE4 155 aa6.58□□□□□ -1.36
XRCC4-203ENST00000396027 GGCXP38435 758 aa6.57□□□□□ -1.36
XRCC4-203ENST00000396027 FAM181BA6NEQ2 426 aa6.56□□□□□ -1.36
XRCC4-203ENST00000396027 STK25O00506 426 aa6.56□□□□□ -1.36
XRCC4-203ENST00000396027 SUZ12Q15022 739 aaKnown RBP6.56□□□□□ -1.36
XRCC4-203ENST00000396027 FAM98CQ17RN3 349 aaKnown RBP6.56□□□□□ -1.36
XRCC4-203ENST00000396027 KIAA1468Q9P260 1216 aa6.56□□□□□ -1.36
XRCC4-203ENST00000396027 UPF1Q92900 1129 aaKnown RBP eCLIP6.55□□□□□ -1.36
XRCC4-203ENST00000396027 PPP4CP60510 307 aa6.54□□□□□ -1.36
XRCC4-203ENST00000396027 PRR20EP86478 221 aa6.54□□□□□ -1.36
XRCC4-203ENST00000396027 PRR20CP86479 221 aa6.54□□□□□ -1.36
XRCC4-203ENST00000396027 PRR20DP86480 221 aa6.54□□□□□ -1.36
XRCC4-203ENST00000396027 PRR20BP86481 221 aa6.54□□□□□ -1.36
XRCC4-203ENST00000396027 PRR20AP86496 221 aa6.54□□□□□ -1.36
XRCC4-203ENST00000396027 TTBK1Q5TCY1 1321 aaPredicted RBP6.53□□□□□ -1.36
XRCC4-203ENST00000396027 PPP1R37O75864 691 aa6.53□□□□□ -1.36
XRCC4-203ENST00000396027 MTRQ99707 1265 aa6.53□□□□□ -1.36
XRCC4-203ENST00000396027 TRIM67Q6ZTA4 783 aa6.52□□□□□ -1.37
XRCC4-203ENST00000396027 TMUB1Q9BVT8 246 aa6.52□□□□□ -1.37
XRCC4-203ENST00000396027 COL9A1P20849 921 aa6.51□□□□□ -1.37
XRCC4-203ENST00000396027 EVI5O60447 810 aa6.5□□□□□ -1.37
XRCC4-203ENST00000396027 SEPT9Q9UHD8 586 aaPredicted RBP6.5□□□□□ -1.37
XRCC4-203ENST00000396027 NFX1Q12986 1120 aaKnown RBP6.5□□□□□ -1.37
XRCC4-203ENST00000396027 FBXW7Q969H0 707 aa6.5□□□□□ -1.37
XRCC4-203ENST00000396027 FAM187AA6NFU0 413 aa6.48□□□□□ -1.37
XRCC4-203ENST00000396027 SLC19A1P41440 591 aa6.46□□□□□ -1.37
XRCC4-203ENST00000396027 AAASQ9NRG9 546 aa6.46□□□□□ -1.37
XRCC4-203ENST00000396027 TRIM6-TRIM34B2RNG4 842 aa6.45□□□□□ -1.38
XRCC4-203ENST00000396027 TYW1BQ6NUM6 668 aa6.45□□□□□ -1.38
XRCC4-203ENST00000396027 ZNF598Q86UK7 904 aaKnown RBP6.45□□□□□ -1.38
XRCC4-203ENST00000396027 ZNF516Q92618 1163 aa6.44□□□□□ -1.38
XRCC4-203ENST00000396027 PCDHGA10Q9Y5H3 936 aa6.44□□□□□ -1.38
XRCC4-203ENST00000396027 ST8SIA5O15466 376 aa6.43□□□□□ -1.38
XRCC4-203ENST00000396027 CRIPAKQ8N1N5 446 aa6.43□□□□□ -1.38
XRCC4-203ENST00000396027 PPP1R15BQ5SWA1 713 aa6.42□□□□□ -1.38
XRCC4-203ENST00000396027 SPRYD7Q5W111 196 aa6.42□□□□□ -1.38
XRCC4-203ENST00000396027 C11orf95C9JLR9 678 aaPredicted RBP6.41□□□□□ -1.38
XRCC4-203ENST00000396027 NKX2-3Q8TAU0 364 aa6.4□□□□□ -1.38
XRCC4-203ENST00000396027 PHF14O94880 888 aa6.4□□□□□ -1.39
XRCC4-203ENST00000396027 PACS2Q86VP3 889 aa6.39□□□□□ -1.39
XRCC4-203ENST00000396027 MAP3K9P80192 1104 aa6.38□□□□□ -1.39
XRCC4-203ENST00000396027 NECTIN2Q92692 538 aa6.38□□□□□ -1.39
XRCC4-203ENST00000396027 GDF9O60383 454 aa6.37□□□□□ -1.39
XRCC4-203ENST00000396027 C6orf132Q5T0Z8 1188 aa6.37□□□□□ -1.39
XRCC4-203ENST00000396027 ZNF697Q5TEC3 545 aa6.37□□□□□ -1.39
XRCC4-203ENST00000396027 TERTO14746 1132 aaKnown RBP6.36□□□□□ -1.39
XRCC4-203ENST00000396027 CRISPLD2Q9H0B8 497 aa6.36□□□□□ -1.39
XRCC4-203ENST00000396027 GMPR2Q9P2T1 348 aaKnown RBP6.36□□□□□ -1.39
XRCC4-203ENST00000396027 SAMD7Q7Z3H4 446 aa6.35□□□□□ -1.39
XRCC4-203ENST00000396027 EPAS1Q99814 870 aa6.35□□□□□ -1.39
XRCC4-203ENST00000396027 LMOD2Q6P5Q4 547 aa6.35□□□□□ -1.39
XRCC4-203ENST00000396027 ZSCAN1Q8NBB4 408 aa6.35□□□□□ -1.39
XRCC4-203ENST00000396027 EMID1Q96A84 441 aaPredicted RBP6.35□□□□□ -1.39
XRCC4-203ENST00000396027 RNF223E7ERA6 249 aa6.34□□□□□ -1.39
XRCC4-203ENST00000396027 TNFRSF10AO00220 468 aa6.34□□□□□ -1.39
XRCC4-203ENST00000396027 CTC1Q2NKJ3 1217 aa6.34□□□□□ -1.39
XRCC4-203ENST00000396027 AVPP01185 164 aa6.33□□□□□ -1.4
XRCC4-203ENST00000396027 ANKLE1Q8NAG6 615 aa6.33□□□□□ -1.4
XRCC4-203ENST00000396027 AXIN1O15169 862 aa6.32□□□□□ -1.4
XRCC4-203ENST00000396027 APLP1P51693 650 aa6.32□□□□□ -1.4
XRCC4-203ENST00000396027 LCE2CQ5TA81 110 aa6.32□□□□□ -1.4
XRCC4-203ENST00000396027 ZPR1O75312 459 aa6.31□□□□□ -1.4
XRCC4-203ENST00000396027 DACH1Q9UI36 760 aa6.31□□□□□ -1.4
XRCC4-203ENST00000396027 SMCPP49901 116 aaPredicted RBP6.3□□□□□ -1.4
XRCC4-203ENST00000396027 HDGFP51858 240 aaKnown RBP6.3□□□□□ -1.4
XRCC4-203ENST00000396027 PDE4AP27815 886 aa6.3□□□□□ -1.4
XRCC4-203ENST00000396027 COPS2P61201 443 aa6.3□□□□□ -1.4
XRCC4-203ENST00000396027 LIAT1Q6ZQX7 453 aa6.29□□□□□ -1.4
XRCC4-203ENST00000396027 SLC16A10Q8TF71 515 aa6.29□□□□□ -1.4
XRCC4-203ENST00000396027 TSKSQ9UJT2 592 aa6.28□□□□□ -1.4
XRCC4-203ENST00000396027 SENP2Q9HC62 589 aa6.26□□□□□ -1.41
XRCC4-203ENST00000396027 RNF40O75150 1001 aa6.25□□□□□ -1.41
XRCC4-203ENST00000396027 LORP23490 312 aaPredicted RBP6.25□□□□□ -1.41
XRCC4-203ENST00000396027 PRR14Q9BWN1 585 aa6.25□□□□□ -1.41
XRCC4-203ENST00000396027 NBPF26B4DH59 902 aa6.23□□□□□ -1.41
XRCC4-203ENST00000396027 ECM2O94769 699 aaPredicted RBP6.23□□□□□ -1.41
XRCC4-203ENST00000396027 KCNMA1Q12791 1236 aa6.23□□□□□ -1.41
XRCC4-203ENST00000396027 KCTD17Q8N5Z5 321 aa6.23□□□□□ -1.41
XRCC4-203ENST00000396027 TRIM47Q96LD4 638 aa6.22□□□□□ -1.41
XRCC4-203ENST00000396027 PKD2L1Q9P0L9 805 aa6.22□□□□□ -1.41
XRCC4-203ENST00000396027 GMPRP36959 345 aa6.21□□□□□ -1.42
XRCC4-203ENST00000396027 SLC4A3P48751 1232 aa6.21□□□□□ -1.42
XRCC4-203ENST00000396027 IRF7Q92985 503 aa6.21□□□□□ -1.42
XRCC4-203ENST00000396027 KIFC2Q96AC6 838 aa6.21□□□□□ -1.42
XRCC4-203ENST00000396027 RBM33Q96EV2 1170 aaKnown RBP6.21□□□□□ -1.42
XRCC4-203ENST00000396027 DDX27Q96GQ7 796 aaKnown RBP6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms