RNA–Protein interactions for RNA: ENST00000394947.7

SIN3A-202, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 6,737 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-202ENST00000394947 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.19■□□□□ 0.028e-7■■■■■ 185.9
SIN3A-202ENST00000394947 BCL2L13Q9BXK5 485 aa15.18■□□□□ 0.02
SIN3A-202ENST00000394947 HSPA5P11021 654 aaKnown RBP15.18■□□□□ 0.02
SIN3A-202ENST00000394947 FAM184AQ8NB25 1140 aa15.18■□□□□ 0.02
SIN3A-202ENST00000394947 GOLGA6L19H0YKK7 550 aa15.18■□□□□ 0.02
SIN3A-202ENST00000394947 RRP12Q5JTH9 1297 aaKnown RBP15.17■□□□□ 0.02
SIN3A-202ENST00000394947 CCDC34Q96HJ3 373 aa15.17■□□□□ 0.02
SIN3A-202ENST00000394947 NAP1L1P55209 391 aaKnown RBP15.16■□□□□ 0.02
SIN3A-202ENST00000394947 DHX16O60231 1041 aaKnown RBP15.16■□□□□ 0.02
SIN3A-202ENST00000394947 CSPP1Q1MSJ5 1256 aa15.16■□□□□ 0.02
SIN3A-202ENST00000394947 MTMR7Q9Y216 660 aa15.16■□□□□ 0.02
SIN3A-202ENST00000394947 RSF1Q96T23 1441 aaPredicted RBP15.16■□□□□ 0.02
SIN3A-202ENST00000394947 FAM13BQ9NYF5 915 aa15.15■□□□□ 0.02
SIN3A-202ENST00000394947 PLCD4Q9BRC7 762 aa15.15■□□□□ 0.02
SIN3A-202ENST00000394947 CTDP1Q9Y5B0 961 aaPredicted RBP15.15■□□□□ 0.02
SIN3A-202ENST00000394947 BAZ1BQ9UIG0 1483 aaKnown RBP15.15■□□□□ 0.02
SIN3A-202ENST00000394947 BECN2A8MW95 431 aa15.14■□□□□ 0.01
SIN3A-202ENST00000394947 TTLL5Q6EMB2 1281 aa15.14■□□□□ 0.01
SIN3A-202ENST00000394947 SPAG9O60271 1321 aaKnown RBP15.14■□□□□ 0.01
SIN3A-202ENST00000394947 PLIN1O60240 522 aa15.14■□□□□ 0.01
SIN3A-202ENST00000394947 AKAP17AQ02040 695 aaKnown RBP15.14■□□□□ 0.01
SIN3A-202ENST00000394947 TPM2P07951 284 aa15.13■□□□□ 0.01
SIN3A-202ENST00000394947 KTN1Q86UP2 1357 aaKnown RBP15.13■□□□□ 0.01
SIN3A-202ENST00000394947 TRIM34Q9BYJ4 488 aa15.13■□□□□ 0.01
SIN3A-202ENST00000394947 CFAP44Q96MT7 982 aa15.13■□□□□ 0.01
SIN3A-202ENST00000394947 DDX49Q9Y6V7 483 aaKnown RBP15.12■□□□□ 0.01
SIN3A-202ENST00000394947 PMFBP1Q8TBY8 1022 aa15.12■□□□□ 0.01
SIN3A-202ENST00000394947 PHF14O94880 888 aa15.12■□□□□ 0.01
SIN3A-202ENST00000394947 HOMER1Q86YM7 354 aa15.12■□□□□ 0.01
SIN3A-202ENST00000394947 FYB1O15117 783 aa15.11■□□□□ 0.01
SIN3A-202ENST00000394947 APPP05067 770 aa15.11■□□□□ 0.01
SIN3A-202ENST00000394947 ANKRD45Q5TZF3 282 aa15.11■□□□□ 0.01
SIN3A-202ENST00000394947 ST18O60284 1047 aa15.11■□□□□ 0.01
SIN3A-202ENST00000394947 IPO9Q96P70 1041 aaKnown RBP15.11■□□□□ 0.01
SIN3A-202ENST00000394947 ZFYVE27Q5T4F4 411 aa15.1■□□□□ 0.01
SIN3A-202ENST00000394947 EIF4G1Q04637 1599 aaKnown RBP15.1■□□□□ 0.01
SIN3A-202ENST00000394947 CWC22Q9HCG8 908 aaKnown RBP15.1■□□□□ 0.01
SIN3A-202ENST00000394947 TCERG1O14776 1098 aaKnown RBP15.1■□□□□ 0.01
SIN3A-202ENST00000394947 CCDC70Q6NSX1 233 aa15.09■□□□□ 0.01
SIN3A-202ENST00000394947 AMPHP49418 695 aa15.09■□□□□ 0.01
SIN3A-202ENST00000394947 KANK1Q14678 1352 aa15.08■□□□□ 0
SIN3A-202ENST00000394947 TPM1P09493 284 aa15.08■□□□□ 0
SIN3A-202ENST00000394947 MYO15BQ96JP2 1530 aa15.08■□□□□ 0
SIN3A-202ENST00000394947 ROCK2O75116 1388 aaKnown RBP15.08■□□□□ 0
SIN3A-202ENST00000394947 SYTL4Q96C24 671 aaPredicted RBP15.08■□□□□ 0
SIN3A-202ENST00000394947 EIF2S2P20042 333 aaKnown RBP15.07■□□□□ 0
SIN3A-202ENST00000394947 CEP162Q5TB80 1403 aa15.07■□□□□ 0
SIN3A-202ENST00000394947 ANO2Q9NQ90 1003 aa15.07■□□□□ 0
SIN3A-202ENST00000394947 NGDNQ8NEJ9 315 aaKnown RBP15.06■□□□□ 0
SIN3A-202ENST00000394947 HMMRO75330 724 aa15.06■□□□□ 0
SIN3A-202ENST00000394947 MAP7D2Q96T17 732 aa15.06■□□□□ 0
SIN3A-202ENST00000394947 USP35Q9P2H5 1018 aa15.06■□□□□ 0
SIN3A-202ENST00000394947 ZNF428Q96B54 188 aa15.06■□□□□ 0
SIN3A-202ENST00000394947 TSHZ2Q9NRE2 1034 aa15.06■□□□□ 0
SIN3A-202ENST00000394947 GPS2Q13227 327 aa15.05■□□□□ -0
SIN3A-202ENST00000394947 CT47A1Q5JQC4 288 aaPredicted RBP15.05■□□□□ -0
SIN3A-202ENST00000394947 HDGFP51858 240 aaKnown RBP15.04■□□□□ -0
SIN3A-202ENST00000394947 SYNE3Q6ZMZ3 975 aa15.03■□□□□ -0
SIN3A-202ENST00000394947 HSP90AB2PQ58FF8 381 aa15.03■□□□□ -0
SIN3A-202ENST00000394947 NFXL1Q6ZNB6 911 aa15.03■□□□□ -0
SIN3A-202ENST00000394947 BICD2Q8TD16 824 aa15.03■□□□□ -0
SIN3A-202ENST00000394947 RUFY1Q96T51 708 aa15.03■□□□□ -0
SIN3A-202ENST00000394947 ODF2Q5BJF6 829 aa15.03■□□□□ -0
SIN3A-202ENST00000394947 CENPJQ9HC77 1338 aaPredicted RBP15.02■□□□□ -0
SIN3A-202ENST00000394947 EVA1CP58658 441 aa15.02□□□□□ -0.01
SIN3A-202ENST00000394947 PKD2Q13563 968 aa15.02□□□□□ -0.01
SIN3A-202ENST00000394947 TRIM29Q14134 588 aa15.02□□□□□ -0.01
SIN3A-202ENST00000394947 PDILTQ8N807 584 aa15.02□□□□□ -0.01
SIN3A-202ENST00000394947 CCDC43Q96MW1 224 aaKnown RBP15.02□□□□□ -0.01
SIN3A-202ENST00000394947 CCNB3Q8WWL7 1395 aa15.01□□□□□ -0.01
SIN3A-202ENST00000394947 VPS37DQ86XT2 251 aa15.01□□□□□ -0.01
SIN3A-202ENST00000394947 MAPK8IP2Q13387 824 aaPredicted RBP15□□□□□ -0.01
SIN3A-202ENST00000394947 DDX11L8A8MPP1 907 aa15□□□□□ -0.01
SIN3A-202ENST00000394947 STK11IPQ8N1F8 1099 aa14.99□□□□□ -0.01
SIN3A-202ENST00000394947 NOL10Q9BSC4 688 aaKnown RBP14.99□□□□□ -0.01
SIN3A-202ENST00000394947 VPS37CA5D8V6 355 aaPredicted RBP14.99□□□□□ -0.01
SIN3A-202ENST00000394947 PAF1Q8N7H5 531 aa14.99□□□□□ -0.01
SIN3A-202ENST00000394947 IFT57Q9NWB7 429 aa14.99□□□□□ -0.01
SIN3A-202ENST00000394947 TEX35Q5T0J7 233 aa14.99□□□□□ -0.01
SIN3A-202ENST00000394947 IPO7O95373 1038 aaKnown RBP14.98□□□□□ -0.01
SIN3A-202ENST00000394947 DIAPH3Q9NSV4 1193 aa14.98□□□□□ -0.01
SIN3A-202ENST00000394947 CAGE1Q8TC20 777 aa14.96□□□□□ -0.01
SIN3A-202ENST00000394947 KIF3AQ9Y496 699 aa14.96□□□□□ -0.01
SIN3A-202ENST00000394947 IBSPP21815 317 aaPredicted RBP14.96□□□□□ -0.01
SIN3A-202ENST00000394947 TMEM132AQ24JP5 1023 aa14.96□□□□□ -0.01
SIN3A-202ENST00000394947 AMOTL1Q8IY63 956 aa14.96□□□□□ -0.01
SIN3A-202ENST00000394947 CPLX1O14810 134 aa14.95□□□□□ -0.02
SIN3A-202ENST00000394947 EPS15P42566 896 aa14.95□□□□□ -0.02
SIN3A-202ENST00000394947 PHF23Q9BUL5 403 aaPredicted RBP14.95□□□□□ -0.02
SIN3A-202ENST00000394947 AK7Q96M32 723 aa14.95□□□□□ -0.02
SIN3A-202ENST00000394947 RSPH6AQ9H0K4 717 aa14.95□□□□□ -0.02
SIN3A-202ENST00000394947 GOLGA3Q08378 1498 aa14.95□□□□□ -0.02
SIN3A-202ENST00000394947 CCDC27Q2M243 656 aa14.95□□□□□ -0.02
SIN3A-202ENST00000394947 HSP90AB3PQ58FF7 597 aa14.95□□□□□ -0.02
SIN3A-202ENST00000394947 GSE1Q14687 1217 aa14.94□□□□□ -0.02
SIN3A-202ENST00000394947 CRBNQ96SW2 442 aa14.94□□□□□ -0.02
SIN3A-202ENST00000394947 TRAK1Q9UPV9 953 aa14.94□□□□□ -0.02
SIN3A-202ENST00000394947 MEX3CQ5U5Q3 659 aaKnown RBP14.94□□□□□ -0.02
SIN3A-202ENST00000394947 ANKRD62A6NC57 917 aa14.93□□□□□ -0.02
SIN3A-202ENST00000394947 FAM177BA6PVY3 158 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms