RNA–Protein interactions for RNA: ENST00000378123.4

PCDHA8-201, Transcript of protocadherin alpha 8, humanhuman

APPRIS ALT2 BASIC

Gene PCDHA8, Length 2,616 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA8-201ENST00000378123 PNISRQ8TF01 805 aaKnown RBP24.3■■□□□ 1.48
PCDHA8-201ENST00000378123 ARHGEF12Q9NZN5 1544 aa24.29■■□□□ 1.48
PCDHA8-201ENST00000378123 TTC37Q6PGP7 1564 aa24.29■■□□□ 1.48
PCDHA8-201ENST00000378123 ARID4BQ4LE39 1312 aaPredicted RBP24.29■■□□□ 1.48
PCDHA8-201ENST00000378123 PREX2Q70Z35 1606 aa24.28■■□□□ 1.48
PCDHA8-201ENST00000378123 CHD1O14646 1710 aa24.28■■□□□ 1.48
PCDHA8-201ENST00000378123 CCDC144AA2RUR9 1427 aa24.27■■□□□ 1.48
PCDHA8-201ENST00000378123 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.25■■□□□ 1.47
PCDHA8-201ENST00000378123 RSPH4AQ5TD94 716 aa24.25■■□□□ 1.47
PCDHA8-201ENST00000378123 PLA2R1Q13018 1463 aa24.24■■□□□ 1.47
PCDHA8-201ENST00000378123 PLEKHH2Q8IVE3 1493 aa24.24■■□□□ 1.47
PCDHA8-201ENST00000378123 MSH5O43196 834 aa24.23■■□□□ 1.47
PCDHA8-201ENST00000378123 ERICH6BQ5W0A0 696 aa24.23■■□□□ 1.47
PCDHA8-201ENST00000378123 SALL2Q9Y467 1007 aaPredicted RBP24.23■■□□□ 1.47
PCDHA8-201ENST00000378123 NUDCQ9Y266 331 aa24.22■■□□□ 1.47
PCDHA8-201ENST00000378123 PRAG1Q86YV5 1406 aa24.2■■□□□ 1.46
PCDHA8-201ENST00000378123 SMG6Q86US8 1419 aaKnown RBP24.2■■□□□ 1.46
PCDHA8-201ENST00000378123 MYBBP1AQ9BQG0 1328 aaKnown RBP24.16■■□□□ 1.46
PCDHA8-201ENST00000378123 A2MP01023 1474 aa24.15■■□□□ 1.46
PCDHA8-201ENST00000378123 CC2D1BQ5T0F9 858 aaKnown RBP24.13■■□□□ 1.45
PCDHA8-201ENST00000378123 ABCC2Q92887 1545 aa24.12■■□□□ 1.45
PCDHA8-201ENST00000378123 RALBP1Q15311 655 aa24.12■■□□□ 1.45
PCDHA8-201ENST00000378123 DISP3Q9P2K9 1392 aa24.11■■□□□ 1.45
PCDHA8-201ENST00000378123 TRPM1Q7Z4N2 1603 aa24.11■■□□□ 1.45
PCDHA8-201ENST00000378123 SHROOM2Q13796 1616 aa24.1■■□□□ 1.45
PCDHA8-201ENST00000378123 TESK2Q96S53 571 aa24.09■■□□□ 1.45
PCDHA8-201ENST00000378123 BRD4O60885 1362 aaPredicted RBP24.09■■□□□ 1.45
PCDHA8-201ENST00000378123 PER1O15534 1290 aaPredicted RBP24.09■■□□□ 1.45
PCDHA8-201ENST00000378123 AFAP1Q8N556 730 aa24.09■■□□□ 1.45
PCDHA8-201ENST00000378123 UNC13BO14795 1591 aa24.08■■□□□ 1.45
PCDHA8-201ENST00000378123 LRPPRCP42704 1394 aaKnown RBP24.08■■□□□ 1.45
PCDHA8-201ENST00000378123 MYO5CQ9NQX4 1742 aa24.08■■□□□ 1.44
PCDHA8-201ENST00000378123 EFCAB2Q5VUJ9 269 aa24.07■■□□□ 1.44
PCDHA8-201ENST00000378123 TRAPPC8Q9Y2L5 1435 aa24.07■■□□□ 1.44
PCDHA8-201ENST00000378123 MAST1Q9Y2H9 1570 aa24.06■■□□□ 1.44
PCDHA8-201ENST00000378123 PANK3Q9H999 370 aa24.06■■□□□ 1.44
PCDHA8-201ENST00000378123 KTN1Q86UP2 1357 aaKnown RBP24.06■■□□□ 1.44
PCDHA8-201ENST00000378123 CCDC136Q96JN2 1154 aa24.05■■□□□ 1.44
PCDHA8-201ENST00000378123 RNF123Q5XPI4 1314 aa24.04■■□□□ 1.44
PCDHA8-201ENST00000378123 PLCH2O75038 1416 aa24.04■■□□□ 1.44
PCDHA8-201ENST00000378123 E9PCH4 1651 aa24.04■■□□□ 1.44
PCDHA8-201ENST00000378123 NLRP13Q86W25 1043 aa24.04■■□□□ 1.44
PCDHA8-201ENST00000378123 FANCIQ9NVI1 1328 aa24.03■■□□□ 1.44
PCDHA8-201ENST00000378123 GPRASP1Q5JY77 1395 aa24.02■■□□□ 1.44
PCDHA8-201ENST00000378123 IQGAP3Q86VI3 1631 aa24.02■■□□□ 1.44
PCDHA8-201ENST00000378123 DUOX2Q9NRD8 1548 aa24.02■■□□□ 1.44
PCDHA8-201ENST00000378123 PARD3Q8TEW0 1356 aa24.01■■□□□ 1.43
PCDHA8-201ENST00000378123 PLXNC1O60486 1568 aa24.01■■□□□ 1.43
PCDHA8-201ENST00000378123 CDCA7LQ96GN5 454 aa23.99■■□□□ 1.43
PCDHA8-201ENST00000378123 ZCCHC11Q5TAX3 1644 aaKnown RBP23.99■■□□□ 1.43
PCDHA8-201ENST00000378123 ERBINQ96RT1 1412 aa23.98■■□□□ 1.43
PCDHA8-201ENST00000378123 SPAG9O60271 1321 aaKnown RBP23.98■■□□□ 1.43
PCDHA8-201ENST00000378123 COL17A1Q9UMD9 1497 aaPredicted RBP23.98■■□□□ 1.43
PCDHA8-201ENST00000378123 TMF1P82094 1093 aa23.97■■□□□ 1.43
PCDHA8-201ENST00000378123 MYT1LQ9UL68 1186 aa23.96■■□□□ 1.43
PCDHA8-201ENST00000378123 PRDM15P57071 1507 aaPredicted RBP23.96■■□□□ 1.43
PCDHA8-201ENST00000378123 MAGI2Q86UL8 1455 aa23.92■■□□□ 1.42
PCDHA8-201ENST00000378123 ABCC1P33527 1531 aa23.92■■□□□ 1.42
PCDHA8-201ENST00000378123 EXOC6Q8TAG9 804 aa23.92■■□□□ 1.42
PCDHA8-201ENST00000378123 RCAN3Q9UKA8 241 aa23.91■■□□□ 1.42
PCDHA8-201ENST00000378123 RRP1P56182 461 aaKnown RBP23.91■■□□□ 1.42
PCDHA8-201ENST00000378123 ATP10AO60312 1499 aa23.9■■□□□ 1.42
PCDHA8-201ENST00000378123 ERICH6Q7L0X2 663 aa23.9■■□□□ 1.42
PCDHA8-201ENST00000378123 PLIN1O60240 522 aa23.86■■□□□ 1.41
PCDHA8-201ENST00000378123 KIF3BO15066 747 aa23.86■■□□□ 1.41
PCDHA8-201ENST00000378123 CLASP1Q7Z460 1538 aa23.85■■□□□ 1.41
PCDHA8-201ENST00000378123 EIF2AK4Q9P2K8 1649 aaKnown RBP23.85■■□□□ 1.41
PCDHA8-201ENST00000378123 LAMC1P11047 1609 aa23.83■■□□□ 1.41
PCDHA8-201ENST00000378123 ADAMTS8Q9UP79 889 aa23.83■■□□□ 1.41
PCDHA8-201ENST00000378123 UHRF1BP1LA0JNW5 1464 aa23.83■■□□□ 1.4
PCDHA8-201ENST00000378123 KNSTRNQ9Y448 316 aa23.81■■□□□ 1.4
PCDHA8-201ENST00000378123 WASHC2CQ9Y4E1 1318 aa23.81■■□□□ 1.4
PCDHA8-201ENST00000378123 ZFYVE16Q7Z3T8 1539 aa23.8■■□□□ 1.4
PCDHA8-201ENST00000378123 SCAPERQ9BY12 1400 aa23.8■■□□□ 1.4
PCDHA8-201ENST00000378123 WDR7Q9Y4E6 1490 aa23.79■■□□□ 1.4
PCDHA8-201ENST00000378123 MADDQ8WXG6 1647 aa23.78■■□□□ 1.4
PCDHA8-201ENST00000378123 PDE3BQ13370 1112 aa23.77■■□□□ 1.4
PCDHA8-201ENST00000378123 PPP2R1AP30153 589 aa23.77■■□□□ 1.4
PCDHA8-201ENST00000378123 RNF17Q9BXT8 1623 aaKnown RBP23.77■■□□□ 1.39
PCDHA8-201ENST00000378123 FANCAO15360 1455 aa23.76■■□□□ 1.39
PCDHA8-201ENST00000378123 CLTCL1P53675 1640 aa23.76■■□□□ 1.39
PCDHA8-201ENST00000378123 CFAP70Q5T0N1 1121 aa23.76■■□□□ 1.39
PCDHA8-201ENST00000378123 AMER1Q5JTC6 1135 aaPredicted RBP23.75■■□□□ 1.39
PCDHA8-201ENST00000378123 PAK3O75914 559 aaPredicted RBP23.75■■□□□ 1.39
PCDHA8-201ENST00000378123 RTEL1-TNFRSF6BF6WH68 1400 aa23.75■■□□□ 1.39
PCDHA8-201ENST00000378123 TRPM2O94759 1503 aa23.74■■□□□ 1.39
PCDHA8-201ENST00000378123 UGGT1Q9NYU2 1555 aa23.74■■□□□ 1.39
PCDHA8-201ENST00000378123 BLMP54132 1417 aaPredicted RBP23.74■■□□□ 1.39
PCDHA8-201ENST00000378123 SKAP1Q86WV1 359 aa23.73■■□□□ 1.39
PCDHA8-201ENST00000378123 PTPRTO14522 1441 aa23.73■■□□□ 1.39
PCDHA8-201ENST00000378123 ADGRF5Q8IZF2 1346 aa23.72■■□□□ 1.39
PCDHA8-201ENST00000378123 SCAF11Q99590 1463 aaKnown RBP23.71■■□□□ 1.39
PCDHA8-201ENST00000378123 KANK1Q14678 1352 aa23.71■■□□□ 1.39
PCDHA8-201ENST00000378123 ATP7AQ04656 1500 aa23.7■■□□□ 1.39
PCDHA8-201ENST00000378123 SPHKAPQ2M3C7 1700 aa23.7■■□□□ 1.38
PCDHA8-201ENST00000378123 WDR43Q15061 677 aaKnown RBP eCLIP23.7■■□□□ 1.38
PCDHA8-201ENST00000378123 C20orf194Q5TEA3 1177 aa23.69■■□□□ 1.38
PCDHA8-201ENST00000378123 ADGRL1O94910 1474 aa23.69■■□□□ 1.38
PCDHA8-201ENST00000378123 IQGAP1P46940 1657 aa23.68■■□□□ 1.38
PCDHA8-201ENST00000378123 CCDC146Q8IYE0 955 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms